XLOC_022682 (mRNA) -

Overview
NameXLOC_022682
Unique NameXLOC_022682
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000305_pilon:76747..78396-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022682 ID=XLOC_022682|Name=XLOC_022682|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1650bp|location=Sequence derived from alignment at sc0000305_pilon:76747..78396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCCCTTTTTCCACAGAAGCCATAGTCAATCTCTGTATGGTGATAT GTTTATTGTGGATGACAAAGATGTAAAGACTTTCATCGAAAAGATCTATC ACTCCAAAACTAAATACAAACAAGTATGGTTAATTTTGTAAGATGAATAT AAAGTATTATATTCAAAATAATATGTTTTCAATATAATGATACAAGGCAC AAGAAATTTTTATTTTAGTACATTTATTATTCAATATTCGTTTGTTGCTG ATTTATGATCTTCAGGAGAATGACAATATTTGTGGTGGTTCATGGACTGC TGCCAAGAATGTTGGAAGAAAGAAGAAATCACTTGACGAGACAGGGCTGG AAGTAGCCACGTGTCGACATGTAATCGCACAGAAAGCAATAAATATGAAA CAAGGTGATTTCTGAATAAAAATAACTGTTCTATTTTTATCGTTTTCACT TTTTGTTTCGTATATTGGTATCGCTTTACTGAAAAATCATATTTTTATCA ATATTTATTTTTTTTAAAAGGTGAACAATATGGGTATGCACTTTATCTCA TGAAACATTACATGGTTAAGTGGAAAGTAGAATATTGCTGGGCAGATGTC ATGTGTAAGTTGTGGAAGTTTGCTCAAAGGATTGATCCGGATATATGTAA ATTAATGAAGCCAGCCTTATCAACAATGCATGCTAAAGGACATAGCATAC AATGCCAGGTTTTTATTTTCATTTTATGATATATTGTATTTTACATACTA ACTAACATGAAAGTGAAGAGTCTGTACTCATAAAGAAGGGTTTGTACGAC TCCCTTATTAAATATTTATTCAAATAGTTTCAAAAATATTTCTTCTTTAA AACCTTCAATAAGAAAATTTTGAATATTCTTAAAAGAAAGTGAGCAAAAT TTCCCAAAAACCTACTTCGGTGAAAAACATTGTTTAGGTTAACATTCTTT TTTCTTGCTTTTTGTAGGTAAATTGGGATGGGTTATGGATAGAAGGAACA GGCAGGTCGACAGGAGAAGAAACTGAGCAATTCTTTAGTTTAGATGTCGA AATACAACCAAATATCAATTTCCTGAAAGTAAGTACCGGGTGAACCACGA AAAAGTATGAGAGTTTGGCAACGTGGTGCGGCCAGGACAGTGTGATTTTT GGAGAAATTAAGTACTTTCATTGATATTTTTCTGAATAGAATTGCTCAAA TTTAATACCCTCTTTTTCACGTTGTTTGATGCTTTTGTAAAGTGTTGATT TTTACCTATTATTGCACATTCAGTCGTACAATTAACGATTACATTAAGGG AATAAATTAATGCAAGAAATAATTAAAGCGGAACTAATTAATGCCAATTT AAATTTATGGGGTGTCATTCGCATTAATTTATTCCGCATTTATCAATTCT TGAATTAAATTATTCTCTTAAGGTAATCACGAGTAACAATGAGAAAACTG TAATTTGTCCGAGTTCGTAAGACGAAAGATTTACTATCCGCAAAATTTTA GTACAGCTAAAACGAGATTGAATGAATGATGAAGCTAATACCAAATAAAT ATTTAAACTTTATAATATTTTTATTTTATGCTATTAGGACGAGAGGAAAC AATTACAGAGCATGCGATACATTGGAATCGGATTAAAATTGAATCTCTAG

Coding sequence (CDS) from alignment at sc0000305_pilon:76747..78396-

>XLOC_022682 ID=XLOC_022682|Name=XLOC_022682|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000305_pilon:76747..78396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCCCTTTTTCCACAGAAGCCATAGTCAATCTCTGTATGGTGATAT
GTTTATTGTGGATGACAAAGATGTAAAGACTTTCATCGAAAAGATCTATC
ACTCCAAAACTAAATACAAACAAATGGCTCCCTTTTTCCACAGAAGCCAT
AGTCAATCTCTGTATGGTGATATGTTTATTGTGGATGACAAAGATGTAAA
GACTTTCATCGAAAAGATCTATCACTCCAAAACTAAATACAAACAAAATG
TTGGAAGAAAGAAGAAATCACTTGACGAGACAGGGCTGGAAGTAGCCACG
TGTCGACATGTAATCGCACAGAAAGCAATAAATATGAAACAAGAATGTTG
GAAGAAAGAAGAAATCACTTGACGAGACAGGGCTGGAAGTAGCCACGTGT
CGACATGTAATCGCACAGAAAGCAATAAATATGAAACAAGGTGAACAATA
TGGGTATGCACTTTATCTCATGAAACATTACATGGTTAAGTGGAAAGTAG
AATATTGCTGGGCAGATGTCATGTGTAAGTTGTGGAAGTTTGCTCAAAGG
ATTGATCCGGATATATGTAAATTAATGAAGCCAGCCTTATCAACAATGCA
TGCTAAAGGACATAGCATACAATGCCAGGTGAACAATATGGGTATGCACT
TTATCTCATGAAACATTACATGGTTAAGTGGAAAGTAGAATATTGCTGGG
CAGATGTCATGTGTAAGTTGTGGAAGTTTGCTCAAAGGATTGATCCGGAT
ATATGTAAATTAATGAAGCCAGCCTTATCAACAATGCATGCTAAAGGACA
TAGCATACAATGCCAGGACGAGAGGAAACAATTACAGAGCATGCGATACA
TTGGAATCGGATTAAAATTGAATCTCTAGGACGAGAGGAAACAATTACAG
AGCATGCGATACATTGGAATCGGATTAAAATTGAATCTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_022682XLOC_022682-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305_pilongenomesc0000305_pilon:76747..78396 -
Properties
Property NameValue
Aaloc409-471:64
Aaloc223-408:1129
Aaloc124-219:1344
Aaloc1-123:1651