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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000690_pilon:17267..20170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022254 ID=XLOC_022254|Name=XLOC_022254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2904bp|location=Sequence derived from alignment at sc0000690_pilon:17267..20170- (Clytia hemisphaerica_ch_hm2_pilon)
CTGACGAACTTACCTACAAAGGAGGACAATTTGAAAACCTTACCAACATT
GGATAAGTCAAGTGAGTCTGCTTTTCACATACATTGCTGATTAAAAGTTA
CAAAGTTAGAGATAAGTTTTCAAGAGAAACCTTTGAAAAGTAATGGTGAT
CTCAAACGTAGTTCCAAAACTCCATTCAATTAGGTTAAACTTAATAGCTG
ATGTTTTTTTATGATAATGCTAGTGTATTAAAATGCTGCCTAGTCAATTT
ATACTTTAAGTCAAAATTGAAATATCTACTTTTTTCTTTCAGCAAAAAGT
CCAGTATTCGACCAGCAAAAACGTTAGCTATATTTTAATTTGAATTAATT
CCTAACCTACCCGTATGATTTCAAAAGCTTAAAAAAAATTTTTAAGGGTT
TTGTTCGCTTCTTGCAAATTAGTACGAGAAAGCAATACAATTGTTGCATA
TTGCCAACAGAAAATATCTAGCATTTTTTCTTTTTTCTCTAAAGCCAAGT
CTGCATTTTAAAATTTAGGTCCCTGAACATAAAAGTTAAAAAAACCATAG
TAATAAAAATTGTCCTACCTGTTTCAATTCAGGCTTTCAACCAAGCAGCA
AGATGTCTTTGGGTGCTGGAAATAAAGAAGGTGAGACATTTGTAATTGAG
GCTGCGTGAGACTTTTGAGTTAATTTAGTATCATAATAAATAAGTGTTCA
GTCGATTAAGTTGTTGTCTTCATTTATTTCATTACAATGTTAGAATCAGT
GAGTAACACAGAAACCTCTCTTAGGTGGCTCGTGTACAAATTGCAGAAAG
ATGCAAAGACAGCTTCAATTAGCAAACGAAAAGATTAAAGAATACGGTGA
GATTATAAATTTTCCAATTCTGCTCTATAACAAAATTGTTTGGAGACAAA
AAACTGAGCCTGTGTATGCTCATAACATAACATTTATATAGAAAAAAACA
TGTAGCCTGTGAATGAATAGGACATGGGGAAATCTGTGACCATGTTACTC
TTTAAAGACCCTACATACATCCACACAACGCCCAGCCTTGTTCACCATAA
CCTCTTTTCTCTTAGAGTCAACTTTCAGTAATTTGGGCAGGCTAGTTCCT
GATTTAGTGACAGTCACGCAACAAATCAGCCATTCCTTCCCAAATGGCAA
AAAAACCACAGTAAGTTGAATTTGCCACTATATACTCACATCTTATTAAT
AACTCAATCAAAATGCACTTGTAAATTAAAAAAAAACACCATTATCGAAT
TAGTAAATTTAGCTTATACCCTGTCAAGAAAAAAGCTTTAATGAAAGCAA
GTTTTATAAGGACTTGTAAGAATAAGAATATCCTTTTCTCATAGATTGTT
CCTGCGAGTATGACCCTTGACCAGCACGAGGAAGTGCTTCCTGGAACAGA
CCAAGTGAGTAGTGTATCTATTAAAGTTGGTTAAGTGATAAATTTAGGAG
AGAAAATTTCATAAAGTGAGAATATCTAAAATAAACCTTCTTACGAAAAC
AATGAGGCTGAAAAATTCTTAAGTAAGTGGAGCCTGTAATGGTTGAGTTT
AAAGTAAACTTAGGATCAAATTGGTGGAAAATTAGAGTTTTAACCCAACA
TACATCTGTTTTCAAAACAGCACCAGCAGCAAGAAAAAATTACTTGAATG
TGTATAAGAAACTTAAAACTTTGTTACTTTCTATATAGATGAACTCAACT
CCTGTAATGACGGACAGAGCTATGACCTTTGAGAGTAGTCCAATAATAAC
AGACAGAAAACATAAAAAAACATTAGACGTCAGCACCGGTTATCTTAGCA
ATTCAGATATGCAGGTAGGTACCAGTAAAAGTTTATTTCTCATGAAAATA
TTAGATCCTCCTTAAGTACCTTGATTAATAATTGCGAAAATTTTTAAAAC
CTTTGGATTTTCGAAATTTGCAAAATATAATCCTTGCGAAAAATTTAAGA
TCATGATTTTAGCCTGAACCCCTAGGAAAATGAAAGAAATTCGGTCAAAA
AGGGGCTGATTAGTGAAATGTTAATTTTTATGTCTCGCGAAAATAAGTCC
CCGCAAAAATTAATCCCCCTAAGGTATCTCAAACACTTACCGGAACCAAG
CACTCAGTCCTGCTCAGTCTAACTACAGATTTATTTTCATAACTTTACAA
ACCTTTAGCAAGAAATGATACTCCCAATGACGAACCATGTTAAGTTGACG
GTGGCAGAAATAAAAGTGTTGAAAAGGAAGAGCGATAAATATCAAAAATG
GACACCGGTTTTCAATACCATCGTCAAGAAATACTTCGACGAGAAAACTT
TGAGGAAGTAAGAAAACAATTTCTTTCTTATAAAAAATAGACTCTTCCAG
TTTAACTCTGTTACAAGTCAAACAAGGAACATTTATTCTTGTTTTCCGTC
ACATTGGGCCATTCCAGAAAATTTTTGTTACCCGGTGTCAGACAAAACGC
ATTTTTTAATTTTTTCTAGCTTCGGAAATAATTTTTATTTTCAAGTGGTG
GTCGAGAATTCTGATAAAAATCCATGTATATACTTTTGCAAAAAGCATCT
GAAATTCCACATTTTTTAATTCAATGGCCTTGGAAATTTTGAATTTTATT
AGTTACACGCACAGTCTGATAAAAGACTTTTTTACCCTCTAAAATCCTGT
GTTGTCCGTCCCCTGGTTACAGACGAATTCTGGAATGGCCCATTAATTTC
GAGTGCCGTTTTGTAAATTCAGCCAGATGTTTTGAAATCAAAAAATAAAA
ACATCACATCATGAACATCGAGCATCTAGGAGTAATTAGTAGGGCAAAGA
AAGTACTAAATGTTTCACTTAAAACTTTAAGGTCGTCAGCACAAGGCAAG
GAAAACAAAAAGACTAGAAAGTCAAAGCCAGCATTGAACAAAAAAATTGT
TGCC Coding sequence (CDS) from alignment at sc0000690_pilon:17267..20170- >XLOC_022254 ID=XLOC_022254|Name=XLOC_022254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1284bp|location=Sequence derived from alignment at sc0000690_pilon:17267..20170- (Clytia hemisphaerica_ch_hm2_pilon)
CTGACGAACTTACCTACAAAGGAGGACAATTTGAAAACCTTACCAACATT
GGATAAGTCAACTGACGAACTTACCTACAAAGGAGGACAATTTGAAAACC
TTACCAACATTGGATAAGTCAACAAAAAGTCCAGTATTCGACCAGCAAAA
ACCAAAAAGTCCAGTATTCGACCAGCAAAAACGCTTTCAACCAAGCAGCA
AGATGTCTTTGGGTGCTGGAAATAAAGAAGGCTTTCAACCAAGCAGCAAG
ATGTCTTTGGGTGCTGGAAATAAAGAAGAGTCAACTTTCAGTAATTTGGG
CAGGCTAGTTCCTGATTTAGTGACAGTCACGCAACAAATCAGCCATTCCT
TCCCAAATGGCAAAAAAACCACAAGTCAACTTTCAGTAATTTGGGCAGGC
TAGTTCCTGATTTAGTGACAGTCACGCAACAAATCAGCCATTCCTTCCCA
AATGGCAAAAAAACCACAATTGTTCCTGCGAGTATGACCCTTGACCAGCA
CGAGGAAGTGCTTCCTGGAACAGACCAAATTGTTCCTGCGAGTATGACCC
TTGACCAGCACGAGGAAGTGCTTCCTGGAACAGACCAAATGAACTCAACT
CCTGTAATGACGGACAGAGCTATGACCTTTGAGAGTAGTCCAATAATAAC
AGACAGAAAACATAAAAAAACATTAGACGTCAGCACCGGTTATCTTAGCA
ATTCAGATATGCAGATGAACTCAACTCCTGTAATGACGGACAGAGCTATG
ACCTTTGAGAGTAGTCCAATAATAACAGACAGAAAACATAAAAAAACATT
AGACGTCAGCACCGGTTATCTTAGCAATTCAGATATGCAGCAAGAAATGA
TACTCCCAATGACGAACCATGTTAAGTTGACGGTGGCAGAAATAAAAGTG
TTGAAAAGGAAGAGCGATAAATATCAAAAATGGACACCGGTTTTCAATAC
CATCGTCAAGAAATACTTCGACGAGAAAACTTTGAGGAACAAGAAATGAT
ACTCCCAATGACGAACCATGTTAAGTTGACGGTGGCAGAAATAAAAGTGT
TGAAAAGGAAGAGCGATAAATATCAAAAATGGACACCGGTTTTCAATACC
ATCGTCAAGAAATACTTCGACGAGAAAACTTTGAGGAAGTCGTCAGCACA
AGGCAAGGAAAACAAAAAGACTAGAAAGTCAAAGCCAGCATTGAACAAAA
AAATTGTTGCCGTCGTCAGCACAAGGCAAGGAAAACAAAAAGACTAGAAA
GTCAAAGCCAGCATTGAACAAAAAAATTGTTGCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000690_pilon | genome | sc0000690_pilon:17267..20170 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-642:73 |
| Aaloc | 421-567:747 |
| Aaloc | 295-420:1217 |
| Aaloc | 235-294:1561 |
| Aaloc | 142-234:1838 |
| Aaloc | 94-138:2321 |
| Aaloc | 64-90:2611 |
| Aaloc | 1-60:2905 |
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