XLOC_021840 (mRNA) -

Overview
NameXLOC_021840
Unique NameXLOC_021840
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000043_pilon:1003418..1004266+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021840 ID=XLOC_021840|Name=XLOC_021840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=849bp|location=Sequence derived from alignment at sc0000043_pilon:1003418..1004266+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaacaaagaaacatttCACAAATGATGGTGGACAATAGTGGAAAAGG GTTCACAGTCATTGCAACTGACAGGTTAAAGACATCGCCGAACGGTAAAA AGAATGACAATAAAGGAGCTTTCAAATGCACCATAAAAACCATGATGCAA TTATTTAACCATAGAAAACAAGTCAAGAAACGAATACAACGTGTCACGCT CTCTGTCATCGTGTTAGGCACACGTAACGTCGGCAAGACGTCCCTAATAC GTGCTCTGTGTGGTGAAGAATTTACAAGCGATGCTTCACCAACAGTCCTT GACGTTTATACCAAAGAAAACATGATCAATAATATGTTGGTCAAATTCGA ATTTATAGACTTGTCAGCTTCTCATAGTTTTCCTGCTATGAGGAAATTAT ACATACAGAAAGCCAACATCTTTTTCTTACTTTATGATAATACGAGAGAT AGTTTTAAAGAGATGGTACGCCTGAAAGATGAGATTGAAGAAATACATAA CGTACATTTATCAGAACTTCCTATAGCTGTTATTAAAACCAAATGTGATT CAACGCGATCCAGGACGTTACCAGAGATGGAAGTAGATGATATTTCGCAT TGGTGTGGAACTTTGTTTGCTTGTTCTGCCAAGAAAGGGGTGAATATAGC AGAGATTGAAGAATATTTATTATGCGAGGGTTGTTTTGCTGAtaccaaaa aaacaacaacgacTTTCGAAAGGAATTCTGGACATCGTGTTAGTGGGCGG TATATCTATGGCGGACGAAGGCGGTCTAAAAGTGTTATATTAAATCGGAC TCCTGAACGACCTCGAAGTTCTTGCAGTAACTCGTCTGTACAAAGTTGA

Coding sequence (CDS) from alignment at sc0000043_pilon:1003418..1004266+

>XLOC_021840 ID=XLOC_021840|Name=XLOC_021840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000043_pilon:1003418..1004266+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaacaaagaaacatttCACAAATGATGGTGGACAATAGTGGAAAAGG
GTTCACAGTCATTGCAACTGACAGGTTAAAGACATCGCCGAACGGTAAAA
AGAATGACAATAAAGGAGCTTTCAAATGCACCATAAAAACCATGATGCAA
TTATTTAACCATAGAAAACAAGTCAAGAAACGAATACAACGTGTCACGCT
CTCTGTCATCGTGTTAGGCACACGTAACGTCGGCAAGACGTCCCTAATAC
GTGCTCTGTGTGGTGAAGAATTTACAAGCGATGCTTCACCAACAGTCCTT
GACGTTTATACCAAAGAAAACATGATCAATAATATGTTGGTCAAATTCGA
ATTTATAGACTTGTCAGCTTCTCATAGTTTTCCTGCTATGAGGAAATTAT
ACATACAGAAAGCCAACATCTTTTTCTTACTTTATGATAATACGAGAGAT
AGTTTTAAAGAGATGGTACGCCTGAAAGATGAGATTGAAGAAATACATAA
CGTACATTTATCAGAACTTCCTATAGCTGTTATTAAAACCAAATGTGATT
CAACGCGATCCAGGACGTTACCAGAGATGGAAGTAGATGATATTTCGCAT
TGGTGTGGAACTTTGTTTGCTTGTTCTGCCAAGAAAGGGGTGAATATAGC
AGAGATTGAAGAATATTTATTATGCGAGGGTTGTTTTGCTGAtaccaaaa
aaacaacaacgacTTTCGAAAGGAATTCTGGACATCGTGTTAGTGGGCGG
TATATCTATGGCGGACGAAGGCGGTCTAAAAGTGTTATATTAAATCGGAC
TCCTGAACGACCTCGAAGTTCTTGCAGTAACTCGTCTGTACAAAGTTGAa
aaaaacaaagaaacatttCACAAATGATGGTGGACAATAGTGGAAAAGGG
TTCACAGTCATTGCAACTGACAGGTTAAAGACATCGCCGAACGGTAAAAA
GAATGACAATAAAGGAGCTTTCAAATGCACCATAAAAACCATGATGCAAT
TATTTAACCATAGAAAACAAGTCAAGAAACGAATACAACGTGTCACGCTC
TCTGTCATCGTGTTAGGCACACGTAACGTCGGCAAGACGTCCCTAATACG
TGCTCTGTGTGGTGAAGAATTTACAAGCGATGCTTCACCAACAGTCCTTG
ACGTTTATACCAAAGAAAACATGATCAATAATATGTTGGTCAAATTCGAA
TTTATAGACTTGTCAGCTTCTCATAGTTTTCCTGCTATGAGGAAATTATA
CATACAGAAAGCCAACATCTTTTTCTTACTTTATGATAATACGAGAGATA
GTTTTAAAGAGATGGTACGCCTGAAAGATGAGATTGAAGAAATACATAAC
GTACATTTATCAGAACTTCCTATAGCTGTTATTAAAACCAAATGTGATTC
AACGCGATCCAGGACGTTACCAGAGATGGAAGTAGATGATATTTCGCATT
GGTGTGGAACTTTGTTTGCTTGTTCTGCCAAGAAAGGGGTGAATATAGCA
GAGATTGAAGAATATTTATTATGCGAGGGTTGTTTTGCTGAtaccaaaaa
aacaacaacgacTTTCGAAAGGAATTCTGGACATCGTGTTAGTGGGCGGT
ATATCTATGGCGGACGAAGGCGGTCTAAAAGTGTTATATTAAATCGGACT
CCTGAACGACCTCGAAGTTCTTGCAGTAACTCGTCTGTACAAAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021840XLOC_021840-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000043_pilongenomesc0000043_pilon:1003418..1004266 +
Properties
Property NameValue
Aaloc1-849:1