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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:316457..319679- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021713 ID=XLOC_021713|Name=XLOC_021713|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3223bp|location=Sequence derived from alignment at sc0000199_pilon:316457..319679- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGGTCCATCAAATTCAAACATAACTCCCTCCACTCCAATGGCTGGTCC
ATCAAACTTTGTTATTTTAAATCCATCATTACACCATACAAGTAGTACAC
CTCATTTATTTTCTCCTCAAAATACCACCATGACTGTCCCATCAAACCAA
TCACCTTCAACGCCTGTTACACCAATCTCGCGGTTAACCATTGATCTTCC
ATCGTTTCATCGTCCAACAATTTCAATGGAGAAACAAATTTGTCGTGATG
TTTTGGAAGAGGTTAATAGCAAATGGAATGAAATGTATCCTCACTCGTTT
ACCGAAGTGCTTTGTAAGATCCCTGAAGCCAATGTGACACGTCGTTTATC
AGCAACAGAAAAGAAAAATCAATCTCGTCAGGTGAAAAGAAAAATTAAAA
ACCAAATTGAAGAAGAACTTAGCGAACGTGACACTTTGACTTTATATGGA
ACACGTCAAGCAGGCAGTCGATACGAAGATCAACGACTTGGTCTCTACCA
TGAATCAAAAGAAGAGGCAAAGGAAAGAACAGATGCACGTATGAATATAT
ATAGTATGAAAAAATAAAATGTTTTCTCCTGTCAGAACTACAAACAACAA
AGATTGGCCGAATTCTTTTTCCTCTTAGAGAGACGATGTTACAATGAAAG
GGTAATTAGTCCTCTCTGGGTCCCTCTGTCTTTATCCTGGCTTGGGACAG
GCTGACTGTCATTTAAGACAGTCAGGCGACATTACCCCAGCGGCCTGTAC
AATATTAGTTTTTATTTACTTTTTCCACTAACGTAAGGAGAGGTCAAGAT
CCATGAAACGAATCTAGTATGGGTTTCAATAAAACTTTAAGGGGACGGTT
AGATGTTGTGTACCTTCAAATCCTTCCAACAAGATTACCATAAACTGAAA
AATACGATGAAGAGATTTTTTCAGTTTAGTCCAAAGCTTGTTTATTCCTT
TGTGACTAAAGAATCTTGAATAGATAATACTTTAATTATTTAGGACAATT
GAAGGAAGATGAAGGTCTGGTGAAGCGGAAAAAACATGCTCCAAGTCCAC
ATAAAGTGAAATTTGATCGAGCTGGATTACTTGCTGAAGTGAGCACCATG
AAACCTGGAGATAATGTAATTGCTTTTCATTCAAATTTACTTTATTGTTC
AACTTCATTTTCAATTTGAGAAAAATTCTTCGCAAAACAGCGAGCAATTT
CCTAGTTTTAACTTTTGATATTTTACTTTGTATCACCTTAACCTCTTTAT
TTACAGATAAGCTACAATAGACTTGCCGAAAAGTATGGAATGACACATAC
TACCAAAAATGTCACGTGCAAGAAATTTTTGCAACAAGAAGGAGTCAATC
TGGATCAATTCGTGAACAATTTTGAAAGACCAAGAGATCCTCGAAGAGCA
AAGAAGAAATTGTGTATGATAGCAAGTTTTATAAAATTGATACCAATTTT
CATACTTTTTATTAAAATTCTGCGATAATTAACAAAAAGTTAATTTGGTG
GAAAAAACACCTTGTTCCCTCATAGTTTACAAATTGTGTAACTAAATAGT
GCTAATAAAATGATTAAAAAATGTTAAGGCAATTTTTTTCTGCATGATTT
CTAAAAAGATATATTAAATATAATAACAATTCTTTCTTTAAGCTGGAGGT
GACATATCTTTTCCTCAACCCCGTTGCTACAAAAAGTTAAGGAAAGAAAT
GGTTAAGATGGTTGAAGATGGAAAGTTTTTGCAAGGTGAACTATTGGAGC
CAAAAACATTCAAAAAAATCAAGATTAAGAAGAATGGAGATATCGAGGTG
GAAACATTTACGGTAGAAGGGAGGGCTATTCCACTGGTTGAAATTAGAAA
GAAGATTTATCAAGAGCACAAGTCTAAAGGTAAACCTTACAATGAAAATT
TTTTTTGAAAAAAAAGTCGATGACCTTTTGTAGAATTTATATTTGGAATT
TTTATGTTTAGTTATGATTTGAAATCTCAAAAACGATTTGTGACGGGGTT
TATTTAGGATTGTTGCATTTTTATTACAATAGGTTATCTGCGTGAAATGG
TTTCTTATACTCGTCACTTCATTGTTTGGGGAGATCATTCATCGCTTCTT
AGCAAAGGATTTATGGTTTACACAACACGAGTTCTGTATGACAGCAAAAT
TTTCTTCACTGATCAGGAGGTATACTATCAAAATAGGTTTCTTTGGAACT
TTTTACTCTTCCACACATATACTTTTTAGAAATCTTCTTTATGAATTTTA
TAATTCATTTAATGTGTAGGTTGAAACCCAGTTATCACACTTTTACTTGT
ACAATATGAGATATATTTTTCTCGTTCAGAGAAATTTTAAGTTAAATATT
GTATCTATTACATAAAAAAAATATTTATTTAGATGCTACAGATGAAAAAG
AAAATAGTGAACGTGCAAAGTGAAGTGGAGCAGCCTGAAATATACATTTT
GGCCCATTGCAATGACACCATTGAAGAAAAATATTCCTTTGTTTCAAAAA
GAAGAGAGGAGATCATGGAGATGGCTGACCCTCTCGTTGTAGATGGTATC
GAGTTGAAGGATAAATTGAGATTTTTCCAAGGTATGCACTTTTTATTTAT
AAGCCTAACATTTTGGTCAGGCTGAAATTTTGAAATATTTAAGCATGATC
CTAAGCATATTTCCAAGTTGAGATGCTAATAAAACAAGACTAACCGGATA
TTCTTGAAATATATTGATGAGGAAATTGGAAATCTCCTTCAAATTTTGTG
GATATATTTGTAATCAAATTACCCTTAATCAATTATTTGACTTTTGTAGG
AGACCACCCTGAGCTACAATTTGAAAGTGGGAATAGTATTGGTGGAAACT
ATCCTTGCCACTGTGGATGTCCAAAGTTTGAATTTAATAATCCTGGCAAA
GGCTACAAATACAAATTGACTTCACTAGAATGGAGAAGGGAGAAAGTATG
TACCATTGAATTTTCCGTTAATATTTGTAAGAATGCATCCAATGTGAAAG
CTAAGTTTTTCTGTTCATTTAAGTTCTTTTTTTTAAATTTCTCATTTTTC
ACTGATACTTTCAGCTCACACAAACTCGAAGAGGTAGACAGGAGAATGAG
ATAAATCCGCTTTCAAATTTAAAAGCTCAAGATCTTTTTAATGAAGTGAT
GGACCGAAATCTATTGGAAAAAGATTCAAGCCTTCTGAAGGACTACCTGG
AACACCTATTAAAGACTGAAATG Coding sequence (CDS) from alignment at sc0000199_pilon:316457..319679- >XLOC_021713 ID=XLOC_021713|Name=XLOC_021713|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3390bp|location=Sequence derived from alignment at sc0000199_pilon:316457..319679- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGGTCCATCAAATTCAAACATAACTCCCTCCACTCCAATGGCTGGTCC
ATCAAACTTTGTTATTTTAAATCCATCATTACACCATACAAGTAGTACAC
CTCATTTATTTTCTCCTCAAAATACCACCATGACTGTCCCATCAAACCAA
TCACCTTCAACGCCTGTTACACCAATCTCGCGGTTAACCATTGATCTTCC
ATCGTTTCATCGTCCAACAATTTCAATGGAGAAACAAATTTGTCGTGATG
TTTTGGAAGAGGTTAATAGCAAATGGAATGAAATGTATCCTCACTCGTTT
ACCGAAGTGCTTTGTAAGATCCCTGAAGCCAATGTGACACGTCGTTTATC
AGCAACAGAAAAGAAAAATCAATCTCGTCAGGTGAAAAGAAAAATTAAAA
ACCAAATTGAAGAAGAACTTAGCGAACGTGACACTTTGACTTTATATGGA
ACACGTCAAGCAGGCAGTCGATACGAAGATCAACGACTTGGTCTCTACCA
TGAATCAAAAGAAGAGGCAAAGGAAAGAACAGATGCACGCTGGTCCATCA
AATTCAAACATAACTCCCTCCACTCCAATGGCTGGTCCATCAAACTTTGT
TATTTTAAATCCATCATTACACCATACAAGTAGTACACCTCATTTATTTT
CTCCTCAAAATACCACCATGACTGTCCCATCAAACCAATCACCTTCAACG
CCTGTTACACCAATCTCGCGGTTAACCATTGATCTTCCATCGTTTCATCG
TCCAACAATTTCAATGGAGAAACAAATTTGTCGTGATGTTTTGGAAGAGG
TTAATAGCAAATGGAATGAAATGTATCCTCACTCGTTTACCGAAGTGCTT
TGTAAGATCCCTGAAGCCAATGTGACACGTCGTTTATCAGCAACAGAAAA
GAAAAATCAATCTCGTCAGGTGAAAAGAAAAATTAAAAACCAAATTGAAG
AAGAACTTAGCGAACGTGACACTTTGACTTTATATGGAACACGTCAAGCA
GGCAGTCGATACGAAGATCAACGACTTGGTCTCTACCATGAATCAAAAGA
AGAGGCAAAGGAAAGAACAGATGCACGACAATTGAAGGAAGATGAAGGTC
TGGTGAAGCGGAAAAAACATGCTCCAAGTCCACATAAAGTGAAATTTGAT
CGAGCTGGATTACTTGCTGAAGTGAGCACCATGAAACCTGGAGATAATGA
CAATTGAAGGAAGATGAAGGTCTGGTGAAGCGGAAAAAACATGCTCCAAG
TCCACATAAAGTGAAATTTGATCGAGCTGGATTACTTGCTGAAGTGAGCA
CCATGAAACCTGGAGATAATATAAGCTACAATAGACTTGCCGAAAAGTAT
GGAATGACACATACTACCAAAAATGTCACGTGCAAGAAATTTTTGCAACA
AGAAGGAGTCAATCTGGATCAATTCGTGAACAATTTTGAAAGACCAAGAG
ATCCTCGAAGAGCAAAGAAGAAATTGTATAAGCTACAATAGACTTGCCGA
AAAGTATGGAATGACACATACTACCAAAAATGTCACGTGCAAGAAATTTT
TGCAACAAGAAGGAGTCAATCTGGATCAATTCGTGAACAATTTTGAAAGA
CCAAGAGATCCTCGAAGAGCAAAGAAGAAATTGTCTGGAGGTGACATATC
TTTTCCTCAACCCCGTTGCTACAAAAAGTTAAGGAAAGAAATGGTTAAGA
TGGTTGAAGATGGAAAGTTTTTGCAAGGTGAACTATTGGAGCCAAAAACA
TTCAAAAAAATCAAGATTAAGAAGAATGGAGATATCGAGGTGGAAACATT
TACGGTAGAAGGGAGGGCTATTCCACTGGTTGAAATTAGAAAGAAGATTT
ATCAAGAGCACAAGTCTAAAGCTGGAGGTGACATATCTTTTCCTCAACCC
CGTTGCTACAAAAAGTTAAGGAAAGAAATGGTTAAGATGGTTGAAGATGG
AAAGTTTTTGCAAGGTGAACTATTGGAGCCAAAAACATTCAAAAAAATCA
AGATTAAGAAGAATGGAGATATCGAGGTGGAAACATTTACGGTAGAAGGG
AGGGCTATTCCACTGGTTGAAATTAGAAAGAAGATTTATCAAGAGCACAA
GTCTAAAGGTTATCTGCGTGAAATGGTTTCTTATACTCGTCACTTCATTG
TTTGGGGAGATCATTCATCGCTTCTTAGCAAAGGATTTATGGTTTACACA
ACACGAGTTCTGTATGACAGCAAAATTTTCTTCACTGATCAGGAGGTTAT
CTGCGTGAAATGGTTTCTTATACTCGTCACTTCATTGTTTGGGGAGATCA
TTCATCGCTTCTTAGCAAAGGATTTATGGTTTACACAACACGAGTTCTGT
ATGACAGCAAAATTTTCTTCACTGATCAGGAGATGCTACAGATGAAAAAG
AAAATAGTGAACGTGCAAAGTGAAGTGGAGCAGCCTGAAATATACATTTT
GGCCCATTGCAATGACACCATTGAAGAAAAATATTCCTTTGTTTCAAAAA
GAAGAGAGGAGATCATGGAGATGGCTGACCCTCTCGTTGTAGATGGTATC
GAGTTGAAGGATAAATTGAGATTTTTCCAAGATGCTACAGATGAAAAAGA
AAATAGTGAACGTGCAAAGTGAAGTGGAGCAGCCTGAAATATACATTTTG
GCCCATTGCAATGACACCATTGAAGAAAAATATTCCTTTGTTTCAAAAAG
AAGAGAGGAGATCATGGAGATGGCTGACCCTCTCGTTGTAGATGGTATCG
AGTTGAAGGATAAATTGAGATTTTTCCAAGGAGACCACCCTGAGCTACAA
TTTGAAAGTGGGAATAGTATTGGTGGAAACTATCCTTGCCACTGTGGATG
TCCAAAGTTTGAATTTAATAATCCTGGCAAAGGCTACAAATACAAATTGA
CTTCACTAGAATGGAGAAGGGAGAAAGAGACCACCCTGAGCTACAATTTG
AAAGTGGGAATAGTATTGGTGGAAACTATCCTTGCCACTGTGGATGTCCA
AAGTTTGAATTTAATAATCCTGGCAAAGGCTACAAATACAAATTGACTTC
ACTAGAATGGAGAAGGGAGAAACTCACACAAACTCGAAGAGGTAGACAGG
AGAATGAGATAAATCCGCTTTCAAATTTAAAAGCTCAAGATCTTTTTAAT
GAAGTGATGGACCGAAATCTATTGGAAAAAGATTCAAGCCTTCTGAAGGA
CTACCTGGAACACCTATTAAAGACTGAAATGCTCACACAAACTCGAAGAG
GTAGACAGGAGAATGAGATAAATCCGCTTTCAAATTTAAAAGCTCAAGAT
CTTTTTAATGAAGTGATGGACCGAAATCTATTGGAAAAAGATTCAAGCCT
TCTGAAGGACTACCTGGAACACCTATTAAAGACTGAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:316457..319679 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1537-1695:160 |
| Aaloc | 1393-1536:423 |
| Aaloc | 1192-1389:842 |
| Aaloc | 1057-1191:1190 |
| Aaloc | 820-1053:1580 |
| Aaloc | 661-816:1968 |
| Aaloc | 541-660:2229 |
| Aaloc | 1-537:3224 |
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