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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000431_pilon:87988..91437- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021311 ID=XLOC_021311|Name=XLOC_021311|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3450bp|location=Sequence derived from alignment at sc0000431_pilon:87988..91437- (Clytia hemisphaerica_ch_hm2_pilon)
ACGCGCTTTCAAGAAGAAAAACTCGATATTGACCGACGAAATGAAAACCG
CTTACGTGACCGCGAGACCGAAATGGACCGCGAAAAGCGTGATTTATCGG
ATAATTGGAAATCACAAATCGACGCCATGAGGAAGGAATGTCAATGTAAC
TTCGATATGAAATTGGAAAGTGAGTTGAAAAAGGAGAAAGAAAAACACAA
GACAGACATGGAGTTGCTGGAGAAGAAGTTCGAGCATGCGCAGTATGATT
TGGAGAAATCAAACGAGAGAGAAGTGACAGAGTTGGAAAAGAAATATCAG
AAATTGATTTTTGACATGGAGAAGAAACAGGATGAGGAGAAGGTAAGAAT
GAAATGGATTTTCAATGTGTGAAAATCCAACGTCCTCTTAATGAGCAAAT
TTAAACAAACAAGTTTTTCTGTTTGTAAATATCTTTGCATGAACGTCCGA
GGGACAAAAATAACAGATCTTGTTTGTTAACACGAGGAAAAAGATAAAAG
TATGAATGATTCCTGTGTTTCACTTTCAGAACAAACTTGAGAAGGAATGG
CAGCGGAAGCTTGAGAACTTGGAGGACGCTTTACGCAAAGAAACCAACTA
TCGAAACGAAAGTGAGAAACTGGCGGCTCATGAAAAAGAAAATCTGAAAG
CTATCAATGAGATGTTAAAGGAAGAGATTGCCAGGATGAAGGATGAGTGT
GAGCGCATGCGTAAACAACAACAAGAAGTTCGAGTTATCGAGAAGCAAAC
TTCTTCCCAAACCTTCTCGACGCGCGCTGATTTACCAGGTGGCTTGCGTG
ATGATTTCGACCGCATCGTGAATGAGTATAAGACAACACTTAAGGAGAGG
TTTGCTGATGAGCGACAGACCATGGAGGAGAAAATGCAGATGGAGAGAGA
CAGGTTGAATGAGAAGTTAGCCCGTGAGCGAGAAGAGATGGAAAAGAGGC
TAAACGAAGAGAAGTTCCGTTTGGAGAGAGATATGGATCGGAGTAGAGAT
GATATTGAGAAAGAAGTCGAGAGAAGGTTGCGGTCGAAGCAACTATCCGA
CACATTGTTGGCGCAACAACAGAGGTTTGACGAGGTCGCACGGAGACTCG
AAGAAGAAGAAAAGAATCGGTATGAGCGCCTCAAGGACACCGAATTCCGG
CAGTTTGAATCAAAGATTGGCGATTTACAACGGGAAAATGAAGGTTTAAA
AGCCAAAATCCAATTACTGGAAGATAACAATAAAGTCTTAAAGAGCTTGA
AAGAGGAAGGACAACAGGAGGTCGAACGTCTTCGAAAAGCTGTGGAGGAT
TTAAAAACAGTCGTTGAAGCGAGGCGGGAATCGGATCGCACACGTGCACA
AACACCGTCCGAGTTCACTCCTTTCTTGATGTCTATGATGCAACAGAACC
AGAATCAACATAACCAGACACAAGATGATCCCATTTCACAAAAAAGCCAA
TTGGATGAGTTGTACATGGAAAGAAGGAAACTGGAAGATTTGAAGAATGA
CCTTCAGAAACAAGAAAGGGTAAGAATAAACTTATGTTTTTAGCGGAAAA
CATTATTATATCTAAGAAAAGTTTGAAAATCTCTCATATACAGTGGAAAC
TCTTTAACCGATCCTCTATAACTCGAATGCCTCCCTTACACGAACGAGTT
ATCTCACCCCTTAAGTTAAAAATACCTTATAAACCTCACTCCAAAACTCG
AAATTTCTCGAGCAAACCGATGTTTTTCAAGGGTGTTCCAGGAGATTCAA
CTGTATCCAAATCTATCAGGGATGACAGTCTATCGGAATCACACGAGTCG
GTGAATATGGTGACTTCTTTTAAAATGTCAGTGATACTGATACTCAAAAT
AAAACTTGTATTGTATATTTCCCCTGTACACAGGATATCCGTGAGCGACG
CACGATGGAGGATGCGGCAAAGATGGCGGCCAACCAATCACAAGAGAAAT
ATGAAAGTTTGTTATCAGAGAAACGGCGCTTGGAACGCCAATTACAAACA
CTCGAGCAACGCGTTATCAATATGCAGGATGAATTCACTAAGTTAAGAAC
ACAACAACAACAAGTTGTACCTGCTCCATCAGGACCACATCAAATCGTTT
TACAGGTGAGAATTTTTAGCACTACCGAGCCCTTTTCAGAAATCGAAAAA
CTAAACCTTTTGAATAAAGGTTTTAAACTTTCAGAGGCTACCTAATTTTG
GGTTCAAATACCTTCAACCTGTATGCCAATCATCGCAGGGTTTCTGTAGA
TTTCCAAAGTGCAAAATGTTTTTTCGTCATGGCCATTTTAAGTACTACGG
GTATTTTGACTCCTCTGCAGCGAGTATACTGCAGTGTTTCAGCATTTTAA
CCTGTTGAGCTACACAAGTACCCATGTCGTATTTCACTATAGTAGCTACA
GCAAATAACTTTTGAGGCATTTTTCCATTGTTCTGGCTAATCCATTGCCT
TCCCAATTACCTTAAATAAAAACCATACAACAGGATAAACAAAAAACACC
AAACATATATAACTCCCAACATATTTCTATCTAACTATAGACACCACCTT
CACCAACAAAAGAACAGAAGGAGACGTCTACATCTCAACCAGTAAACGTG
TTCAATATCCCAGCATCCAACACGCAACCACCTGCCACCAACATGCAACA
ATCCACACCCAACGCACCTGGTCAGATGCCACACCCATTCTTTTACCCTC
ATCCACCAATGTTCTCTCCTAATGACCAGACGGAGAAAATCAGTAAACTC
AAAGCTACTAAGGAACGTTTAACAAGACAATTGGAGGACTTACAAAGAGA
ACTAAGAGATGCGAACCAAGAGAATTCCATGTTGCAGCGACAATGTCAAG
ATTGTGAGAGAAGGATCGAGAAGTTGACGACAGCCCTGGAGAAGGAGCAG
GAGATGACTGGCAATCTGAAGGATATCTTGAGCGAGGAGAAAATGAGGGT
CAATAAACTGAAAGACGATTTGGACCGTGAAAGTGAAAATGTAAGTAAGA
ACTCTTCAAGATTGACGTTTTAAAAGCATCCGGTCTAATACTGTACTCTC
GTTTTTAACAGTGGGGTACTCCTTCTCGTCTGCCTCCTACTTGCTCAATC
ATATGCCAAATATTTCTTTGCGATTTTTTTAGGTTGTGAGAGCTCGCACA
GAAACAGAGGAGATCAGGTCAAACTTACAACAAGACATCCACGATCTTCA
AAACAAGCTACATCTTGCTGAAATCACATTAGCAACATCACGCCAACAGC
AGCAACACCAACATGTGGCACCTCCACCTCCTCCCGCCCAACCTGTAGTC
GAAACCAAGCCACCCATACCACCAACGGCGCCAACAAACACTCATATTCC
ATACCATATCCAACCACGTGAGCAGCACGTGGGAATGGTTTCTTTACCTT
CGATGCCAGTGGTGGGTCCACAACAAATGATGGCGCCGCAAGCAGCACCG
Coding sequence (CDS) from alignment at sc0000431_pilon:87988..91437- >XLOC_021311 ID=XLOC_021311|Name=XLOC_021311|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4644bp|location=Sequence derived from alignment at sc0000431_pilon:87988..91437- (Clytia hemisphaerica_ch_hm2_pilon)
ACGCGCTTTCAAGAAGAAAAACTCGATATTGACCGACGAAATGAAAACCG
CTTACGTGACCGCGAGACCGAAATGGACCGCGAAAAGCGTGATTTATCGG
ATAATTGGAAATCACAAATCGACGCCATGAGGAAGGAATGTCAATGTAAC
TTCGATATGAAATTGGAAAGTGAGTTGAAAAAGGAGAAAGAAAAACACAA
GACAGACATGGAGTTGCTGGAGAAGAAGTTCGAGCATGCGCAGTATGATT
TGGAGAAATCAAACGAGAGAGAAGTGACAGAGTTGGAAAAGAAATATCAG
AAATTGATTTTTGACATGGAGAAGAAACAGGATGAGGAGAAGACGCGCTT
TCAAGAAGAAAAACTCGATATTGACCGACGAAATGAAAACCGCTTACGTG
ACCGCGAGACCGAAATGGACCGCGAAAAGCGTGATTTATCGGATAATTGG
AAATCACAAATCGACGCCATGAGGAAGGAATGTCAATGTAACTTCGATAT
GAAATTGGAAAGTGAGTTGAAAAAGGAGAAAGAAAAACACAAGACAGACA
TGGAGTTGCTGGAGAAGAAGTTCGAGCATGCGCAGTATGATTTGGAGAAA
TCAAACGAGAGAGAAGTGACAGAGTTGGAAAAGAAATATCAGAAATTGAT
TTTTGACATGGAGAAGAAACAGGATGAGGAGAAGAACAAACTTGAGAAGG
AATGGCAGCGGAAGCTTGAGAACTTGGAGGACGCTTTACGCAAAGAAACC
AACTATCGAAACGAAAGTGAGAAACTGGCGGCTCATGAAAAAGAAAATCT
GAAAGCTATCAATGAGATGTTAAAGGAAGAGATTGCCAGGATGAAGGATG
AGTGTGAGCGCATGCGTAAACAACAACAAGAAGTTCGAGTTATCGAGAAG
CAAACTTCTTCCCAAACCTTCTCGACGCGCGCTGATTTACCAGGTGGCTT
GCGTGATGATTTCGACCGCATCGTGAATGAGTATAAGACAACACTTAAGG
AGAGGTTTGCTGATGAGCGACAGACCATGGAGGAGAAAATGCAGATGGAG
AGAGACAGGTTGAATGAGAAGTTAGCCCGTGAGCGAGAAGAGATGGAAAA
GAGGCTAAACGAAGAGAAGTTCCGTTTGGAGAGAGATATGGATCGGAGTA
GAGATGATATTGAGAAAGAAGTCGAGAGAAGGTTGCGGTCGAAGCAACTA
TCCGACACATTGTTGGCGCAACAACAGAGGTTTGACGAGGTCGCACGGAG
ACTCGAAGAAGAAGAAAAGAATCGGTATGAGCGCCTCAAGGACACCGAAT
TCCGGCAGTTTGAATCAAAGATTGGCGATTTACAACGGGAAAATGAAGGT
TTAAAAGCCAAAATCCAATTACTGGAAGATAACAATAAAGTCTTAAAGAG
CTTGAAAGAGGAAGGACAACAGGAGGTCGAACGTCTTCGAAAAGCTGTGG
AGGATTTAAAAACAGTCGTTGAAGCGAGGCGGGAATCGGATCGCACACGT
GCACAAACACCGTCCGAGTTCACTCCTTTCTTGATGTCTATGATGCAACA
GAACCAGAATCAACATAACCAGACACAAGATGATCCCATTTCACAAAAAA
GCCAATTGGATGAGTTGTACATGGAAAGAAGGAAACTGGAAGATTTGAAG
AATGACCTTCAGAAACAAGAAAGGAACAAACTTGAGAAGGAATGGCAGCG
GAAGCTTGAGAACTTGGAGGACGCTTTACGCAAAGAAACCAACTATCGAA
ACGAAAGTGAGAAACTGGCGGCTCATGAAAAAGAAAATCTGAAAGCTATC
AATGAGATGTTAAAGGAAGAGATTGCCAGGATGAAGGATGAGTGTGAGCG
CATGCGTAAACAACAACAAGAAGTTCGAGTTATCGAGAAGCAAACTTCTT
CCCAAACCTTCTCGACGCGCGCTGATTTACCAGGTGGCTTGCGTGATGAT
TTCGACCGCATCGTGAATGAGTATAAGACAACACTTAAGGAGAGGTTTGC
TGATGAGCGACAGACCATGGAGGAGAAAATGCAGATGGAGAGAGACAGGT
TGAATGAGAAGTTAGCCCGTGAGCGAGAAGAGATGGAAAAGAGGCTAAAC
GAAGAGAAGTTCCGTTTGGAGAGAGATATGGATCGGAGTAGAGATGATAT
TGAGAAAGAAGTCGAGAGAAGGTTGCGGTCGAAGCAACTATCCGACACAT
TGTTGGCGCAACAACAGAGGTTTGACGAGGTCGCACGGAGACTCGAAGAA
GAAGAAAAGAATCGGTATGAGCGCCTCAAGGACACCGAATTCCGGCAGTT
TGAATCAAAGATTGGCGATTTACAACGGGAAAATGAAGGTTTAAAAGCCA
AAATCCAATTACTGGAAGATAACAATAAAGTCTTAAAGAGCTTGAAAGAG
GAAGGACAACAGGAGGTCGAACGTCTTCGAAAAGCTGTGGAGGATTTAAA
AACAGTCGTTGAAGCGAGGCGGGAATCGGATCGCACACGTGCACAAACAC
CGTCCGAGTTCACTCCTTTCTTGATGTCTATGATGCAACAGAACCAGAAT
CAACATAACCAGACACAAGATGATCCCATTTCACAAAAAAGCCAATTGGA
TGAGTTGTACATGGAAAGAAGGAAACTGGAAGATTTGAAGAATGACCTTC
AGAAACAAGAAAGGGATATCCGTGAGCGACGCACGATGGAGGATGCGGCA
AAGATGGCGGCCAACCAATCACAAGAGAAATATGAAAGTTTGTTATCAGA
GAAACGGCGCTTGGAACGCCAATTACAAACACTCGAGCAACGCGTTATCA
ATATGCAGGATGAATTCACTAAGTTAAGAACACAACAACAACAAGTTGTA
CCTGCTCCATCAGGACCACATCAAATCGTTTTACAGGATATCCGTGAGCG
ACGCACGATGGAGGATGCGGCAAAGATGGCGGCCAACCAATCACAAGAGA
AATATGAAAGTTTGTTATCAGAGAAACGGCGCTTGGAACGCCAATTACAA
ACACTCGAGCAACGCGTTATCAATATGCAGGATGAATTCACTAAGTTAAG
AACACAACAACAACAAGTTGTACCTGCTCCATCAGGACCACATCAAATCG
TTTTACAGACACCACCTTCACCAACAAAAGAACAGAAGGAGACGTCTACA
TCTCAACCAGTAAACGTGTTCAATATCCCAGCATCCAACACGCAACCACC
TGCCACCAACATGCAACAATCCACACCCAACGCACCTGGTCAGATGCCAC
ACCCATTCTTTTACCCTCATCCACCAATGTTCTCTCCTAATGACCAGACG
GAGAAAATCAGTAAACTCAAAGCTACTAAGGAACGTTTAACAAGACAATT
GGAGGACTTACAAAGAGAACTAAGAGATGCGAACCAAGAGAATTCCATGT
TGCAGCGACAATGTCAAGATTGTGAGAGAAGGATCGAGAAGTTGACGACA
GCCCTGGAGAAGGAGCAGGAGATGACTGGCAATCTGAAGGATATCTTGAG
CGAGGAGAAAATGAGGGTCAATAAACTGAAAGACGATTTGGACCGTGAAA
GTGAAAATACACCACCTTCACCAACAAAAGAACAGAAGGAGACGTCTACA
TCTCAACCAGTAAACGTGTTCAATATCCCAGCATCCAACACGCAACCACC
TGCCACCAACATGCAACAATCCACACCCAACGCACCTGGTCAGATGCCAC
ACCCATTCTTTTACCCTCATCCACCAATGTTCTCTCCTAATGACCAGACG
GAGAAAATCAGTAAACTCAAAGCTACTAAGGAACGTTTAACAAGACAATT
GGAGGACTTACAAAGAGAACTAAGAGATGCGAACCAAGAGAATTCCATGT
TGCAGCGACAATGTCAAGATTGTGAGAGAAGGATCGAGAAGTTGACGACA
GCCCTGGAGAAGGAGCAGGAGATGACTGGCAATCTGAAGGATATCTTGAG
CGAGGAGAAAATGAGGGTCAATAAACTGAAAGACGATTTGGACCGTGAAA
GTGAAAATGTTGTGAGAGCTCGCACAGAAACAGAGGAGATCAGGTCAAAC
TTACAACAAGACATCCACGATCTTCAAAACAAGCTACATCTTGCTGAAAT
CACATTAGCAACATCACGCCAACAGCAGCAACACCAACATGTGGCACCTC
CACCTCCTCCCGCCCAACCTGTAGTCGAAACCAAGCCACCCATACCACCA
ACGGCGCCAACAAACACTCATATTCCATACCATATCCAACCACGTGAGCA
GCACGTGGGAATGGTTTCTTTACCTTCGATGCCAGTGGTGGGTCCACAAC
AAATGATGGCGCCGCAAGCAGCACCGGTTGTGAGAGCTCGCACAGAAACA
GAGGAGATCAGGTCAAACTTACAACAAGACATCCACGATCTTCAAAACAA
GCTACATCTTGCTGAAATCACATTAGCAACATCACGCCAACAGCAGCAAC
ACCAACATGTGGCACCTCCACCTCCTCCCGCCCAACCTGTAGTCGAAACC
AAGCCACCCATACCACCAACGGCGCCAACAAACACTCATATTCCATACCA
TATCCAACCACGTGAGCAGCACGTGGGAATGGTTTCTTTACCTTCGATGC
CAGTGGTGGGTCCACAACAAATGATGGCGCCGCAAGCAGCACCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000431_pilon | genome | sc0000431_pilon:87988..91437 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2038-2355:319 |
| Aaloc | 1588-2037:911 |
| Aaloc | 1366-1587:1568 |
| Aaloc | 376-1365:2922 |
| Aaloc | 34-375:3451 |
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