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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1478518..1481584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021067 ID=XLOC_021067|Name=XLOC_021067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3067bp|location=Sequence derived from alignment at sc0000043_pilon:1478518..1481584- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCCCAAGAGCATGGCTTTAAGATTGAGGATATTATAGCGGAACT
CAATCAAGATGTGAATTCTGGAAAATATAAAGGTTTACAAGAGGCTTGCG
AGAAAGCATCAGATTTATTGCAATCGTGGTATGATAAAAGCTGTTTCTAT
GATGCCTACGCCTTACGGTAAAAATGATATTACCTTTCTCTTATTCAGCA
TTTAGATTTTTAACTGTCTATCAATGTGCTTGCGATAAGCTGAAACGAAT
GGTTACTTTTTTGACAAGTTTGAGCTTTAAATCATGGCTGATATTAATGA
TAATTCACCAATTGAATACAGCAGGTCTCTAGATTGGTACTGAATAACAA
AGCTCCCTTACCGTAAACAAAGAAAATTTCTTTGTCGACTCGGCAATATC
AATTAGAATTAAACTTTGAAAACTTTTTCGTATGAAATAATGTTGAACTA
CACGGCCTTTTATAAGAAAAATCACAACCTTTGAAAACTTTGGATGTTCT
TAGATTTTTGGGTTTTTAAGCCTAAGAATGTTCTTAAAAATGTTCTTAAA
AATGTTCTTTTTTTCACCATTTTGTGAGTGATTTTGTGCATTTCCTAAGG
AATTTCCGCGTTTGAAAAACCTTAAAATGTCTCGTTGCAACCAAAACATT
ATGTTCTCAATACATTGTTTGTTCTATAAAAAAGGGTAGGTTTAGATGTA
ACTGGAGTTTTGTTCTGCCAGAATTATCATCGTTATTTTTCGTTTTAGAG
ATGTGTGTTTCCTTCCCTTCAAGATCGCTTTGGAATCCGGCTCCACAAAA
TTGGCCACGCTCGCCATCAGTGGTTTTCAGGTATATTATTCTTTCTTCAT
CCGACATTTACTGAAGCTTGTTAAGTGTTTATTTAGCTTTTCTTGAAGAA
ATTATCCACAGTTATTTATTTGGTTGAAACATAACGAAACCTAAAATAAC
ATTACGAAAAAATACATTACGTTTCTTACCACCTAGATCATTGTATCGGG
ACAACTGAAAAGTTTCAAATTTTAACTTGGTCAGCGTTTTCATAATTCTA
CCCTTGTAAAACATCACCAAACAATCTTTCGAACATTATTGAAGATAAAC
AATGTCACATTTTTGAATATCTTTAAACAGAAAATCTTTGCAGACGATCG
TTTTCAAACGGACGGGCGTGAAGAAAACATCGAAGATCAATTTTCTGTGC
AATTCTTGAATGCTATTACGGCTGTTCCCTCTCAATCAGACGAAGCTCAA
ATTGAAGTTATGAAAGTAAGTTAACATCCATCATTTTGCTACAACATCAC
AGCCCTCGATGAACGCTTTCTTCATTTCAATCGTTTTTAACACAGTTTCA
ATGGGATTGTTGTTTTAGTATCTGTATCATTTCTCCAAGCTGAGCACATT
ATTCGTGATGTTAGTGGGCACTAATTTGTGGATACATGTTTAAAAAAGTT
TTAGCAAACCTTCTGATATTATTGTTTCATTTGTGTTCTTTTTCAGCTTC
TCCTGCGATTGGTCAACCCGAAAACATGTGACTTGCACGGACCAAATCTT
GTCAAAATGGCGGAGGTATGTGATTTGCTCAAAACTAATATACTTTTATA
AACATTCAATAATTATATCAAATTATATCATTGAACGTGGAAATTGACAA
TGGAAGTTTTGAAAAGCTTTAAACTCACTCAAATACAGTGTAGCATCTCC
ATAACTCGAACACGCAGAGGGAATACAAATTTGCCTGAGTTAATGAAATT
TCAAGATGAAGTGACGAGAAAACTTATTCGAGTTAAGAAGACATTAGAGT
TATAGAGGCTCAAGTTAAAGAGTCACCACTGCATATGTACCACCTTCAAA
TTTTAGATTTGTGTACAGACATTTGTGAAAGCGATCAGTCCTTCCACCAA
ATCAGCATGTCGTGCAACTTTAACTGAGATGTTGAGCACGGTTTGTCAGC
TCTTCCAAGAATGTATGGTAAGCTGGACACTTGATTAACAGCTCCGTTTT
ATGTACTAACACCCCTGTGTCACAGACCCTGTGAGGCCTGATGAAAATTT
CCTACTACTTGTGGGAAAAATACCTTACAATTTCAGCCTCACTGGAAAAT
TGACTTTGATTTCCTCCCCTGTAGAAAATTGCAGTCAAAACCATCCACAC
TGGATTTTTCGAGCTTGGAACAATAAAATTTATATCCCCATCGGGATTTC
ACTATTGGTCAAGTGTTCTATAAAACAAGTATCTTTTCACCTAATATGCA
GACCCCCCAAAAATCACAAATTTTCAGGGCTTACAATTTTGCCTAAAAAC
GCAAAAAATCGCAAATCACGCAAAAACTGCGGGTTTTCAAGCTTGGTAAC
ATTCAGATTTGGAATCAGCACCCTCAAATTGAGTAAGAAACATGTCAAAA
AGTTGGTCACAGACATTTTGAATTTTTTCTTTATTTTTGAAACAATGACA
ATCCACTGGCCACGACCTATAAACTTAATCGAAACCAAGAAATTACAGGC
ATGGGCCTTCTCCCTTATAAACCTCTTTTTGTCGAATCGATTTTGAATTG
ATTCTTCAAGTTCGTTCCTAATTCTAAGTTCGCTTAAAACCTCATTCCTT
TTTTTATAAATCTGATCATCTGACTTAATTTTTCATTTTTTTTTTTTTCA
GCATAATCGACATTCATCTGATTTAAAAGGTAAGTGATTACTAATTTTAA
CCCCTAATTCACTACTTGTGATAATGTGAGAAAATGAAAAAAAAATACAC
TTGGGTAAATTTGGATTCGATAGAAATCACAACGAGTCTTTAAAGCTCCC
AGAAAATCTGTTCTTTAACTATGTCTTTCTCGATAGTCTAAATACATGCC
CCCCCCCCATTTATCACACATTATCCGGATGTTGATTGGACGTTAAATAG
ACCCTAATGTGACTTTTCTGATCAACTCCTGGGATTGGAACTGATTGAAA
CTAAAAAAATGATCTTGCTTTTCATTAGGTGTTGGTAATATATCAACAGA
CACCAGTAAAGTGCTCAGTCATGATATCGTTATGTTACTCAAAGATTTCA
GTTTGAAACTGCAGCAG Coding sequence (CDS) from alignment at sc0000043_pilon:1478518..1481584- >XLOC_021067 ID=XLOC_021067|Name=XLOC_021067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000043_pilon:1478518..1481584- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCCCAAGAGCATGGCTTTAAGATTGAGGATATTATAGCGGAACT
CAATCAAGATGTGAATTCTGGAAAATATAAAGGTTTACAAGAGGCTTGCG
AGAAAGCATCAGATTTATTGCAATCGTGGTATGATAAAAGCTGTTTCTAT
GATGCCTACGCCTTACGATGGCGTCCCAAGAGCATGGCTTTAAGATTGAG
GATATTATAGCGGAACTCAATCAAGATGTGAATTCTGGAAAATATAAAGG
TTTACAAGAGGCTTGCGAGAAAGCATCAGATTTATTGCAATCGTGGTATG
ATAAAAGCTGTTTCTATGATGCCTACGCCTTACGAGATGTGTGTTTCCTT
CCCTTCAAGATCGCTTTGGAATCCGGCTCCACAAAATTGGCCACGCTCGC
CATCAGTGGTTTTCAGAGATGTGTGTTTCCTTCCCTTCAAGATCGCTTTG
GAATCCGGCTCCACAAAATTGGCCACGCTCGCCATCAGTGGTTTTCAGAA
AATCTTTGCAGACGATCGTTTTCAAACGGACGGGCGTGAAGAAAACATCG
AAGATCAATTTTCTGTGCAATTCTTGAATGCTATTACGGCTGTTCCCTCT
CAATCAGACGAAGCTCAAATTGAAGTTATGAAAAAAATCTTTGCAGACGA
TCGTTTTCAAACGGACGGGCGTGAAGAAAACATCGAAGATCAATTTTCTG
TGCAATTCTTGAATGCTATTACGGCTGTTCCCTCTCAATCAGACGAAGCT
CAAATTGAAGTTATGAAACTTCTCCTGCGATTGGTCAACCCGAAAACATG
TGACTTGCACGGACCAAATCTTGTCAAAATGGCGGAGCTTCTCCTGCGAT
TGGTCAACCCGAAAACATGTGACTTGCACGGACCAAATCTTGTCAAAATG
GCGGAGATTTGTGTACAGACATTTGTGAAAGCGATCAGTCCTTCCACCAA
ATCAGCATGTCGTGCAACTTTAACTGAGATGTTGAGCACGGTTTGTCAGC
TCTTCCAAGAATGTATGATTTGTGTACAGACATTTGTGAAAGCGATCAGT
CCTTCCACCAAATCAGCATGTCGTGCAACTTTAACTGAGATGTTGAGCAC
GGTTTGTCAGCTCTTCCAAGAATGTATGCATAATCGACATTCATCTGATT
TAAAAGCATAATCGACATTCATCTGATTTAAAAGGTGTTGGTAATATATC
AACAGACACCAGTAAAGTGCTCAGTCATGATATCGTTATGTTACTCAAAG
ATTTCAGTTTGAAACTGCAGCAGGTGTTGGTAATATATCAACAGACACCA
GTAAAGTGCTCAGTCATGATATCGTTATGTTACTCAAAGATTTCAGTTTG
AAACTGCAGCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1478518..1481584 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-681:88 |
| Aaloc | 565-591:417 |
| Aaloc | 454-564:1212 |
| Aaloc | 385-453:1572 |
| Aaloc | 250-384:1938 |
| Aaloc | 169-249:2319 |
| Aaloc | 1-165:3068 |
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