XLOC_020995 (mRNA) -

Overview
NameXLOC_020995
Unique NameXLOC_020995
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000395_pilon:67465..70191+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020995 ID=XLOC_020995|Name=XLOC_020995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2727bp|location=Sequence derived from alignment at sc0000395_pilon:67465..70191+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGACAGCCAAGTAATACAATGcgaaattgacaaaaatgatcTGTT TGGTTTGGAAGGATACGAGCGAATTCCAATCTCATTCCAAAGGGGAAGCT ACTTTGATACAGTAGAGTACCAATTCGTGCCAGAAATCTACACCTACTAT ATAATGGATAAAAGAAAACTCACTTATAAACAGGCTACTTCATTTATGTG CGGGAAACATCAGCCAACGGCATATCACGTAAGCAAGCTCAATCAGGTAA GTCATTTAACTCATAGCTAGCTAGCTAGCTATAGTTTTACTATACTTACC ATttagtatacatatttttttacaagcaaGTGTCTGTCTCAGTCAGGCta gtgtatgcttaagttctcaaagcatccaggcataggtTAGGCTTAtgcat gcttatgattcacccgagccaagtttttagtgaaaattcagacattttgt taaatttgttcagattttgagaGCCGTGGaatcagtagcggcctggctta attttcatggtggtgcaaactatgaaattggcgcccctggtatttttgtc cttatttgcgccctccaccataagtgaaaatattaaactgtaagagcagt gactggttgaaagtaacgcccagaatctctgagttaacaaacttttattt atacgaaggtggtggtaatgataacttgatatctatttccttgttatttc ctggtcttactttactctccattaaagatcagtggctgaaagaggccccg aaaattcgaaagttgacaggaataagggttctttgtaatacgggggggtt tgtacttttacggtgtgacgggattggcccttttttagtacggtattacg ggatttgacgaaaatagagacgggaaaacggtattttaaaattagacggt gacggtatttaggtacatttttgccatgtacaagccggtgtgaggatgtt attattttttcaattttcgggattccgagATTCAGCccaaattttgacgg gaaaacggtatttcgaacccctacaaccccccacccccctgcaaaaaaat ttggtgtaagagaggtcaaacagcttaaaagatattctaaaaaggagaaa gtccGCATAAGACCaaaaaaaccacagcgagcagtttcgatcaatctctc attttgggggttagcatcctctttaacccctggtggatacacaacacttc tcttaaTTTGACtttcgcaattcaatgttgatagtagaaaaaattcgtaa aagagaacgaagcgccgcaggcgaaaaaaaaattacattgcacttataga aggcgctaaaaacgtgtcaaaagggcgccaaatcgcccaaccaaacatca aaaaaaatttggcgcccccttgaaaagcttttttggcgcccctctcaggt ctttctgggtggtgcactgcacaccctgcaccccctgccaggccgccact gcgTGGAatgcttttttttactttacctCTACCAagcctttttaaacaga taaaaaatgacaaattgaaaaatatttcaggctagcgtatatgcttatgt tttacttaggaattctgcaaatctgagcctacATATGCTTTTAAGcgttg tgcttataaaaaaacatataacgCGTAAGCCCTAATCAAGGCACGCTCTT GTTCTGCCGTTTcatatacaagttttttttataataacatccaagttttt gaagccttatgttcttaactttttgagtcctaaagcctgaaaatgttttc aattgttcttattttcaccatttttctaaggaaaagggtgttttagagtc tgcaaagccttaaaatgttctttgttcttaatattttttgctATTAAAGC TTTTATGTGCTTgtttagcttgttcttataaaggaaACGTGCACAATGCA ATTTCGTAATTGCCGTGTGAGCATTTGTGTGATGAGTGGCGAAGGGCCTT GTATATTCATTGCTTTTATAATTTGTTGAATGTTTTAGGAATACAATTGT CAGCGAATGGGTTTTAGAACTCTCTGTCTTTTAAACGGgttcatttttta attcatttcaatttaatgttcaaagtttgattgattAAACAGGTAGGttc ataaagttttatttaattattaGTAAAAGTAAACTTAGCTCACATCACCT TATCCGGAAATCTATAGTTGTAATAAAGTCCTATTCGTTCCTATAATTTA TGATCTAGCTTTGACTTTGAGCTTGGCTTtctaggagaaaaaaatcacaa aaattgcCGGTTCTAAATCGAATCTAGAATGGTAGGTGTTGATATCTGCC AAGTATTTGTTTTTTACTTCTATCGTCTACTTATTAAGGTGAAATCATCT TTAGTTTGTTTTAGGAGGAAGTCTATGCGCGAGTAAATTCAACAGTTGAT GGTGGCATCTTAATACAATGTAGGTGTTATTTACTTTTGGAAATCTTATT TTGGAAAATAGTGTTCGTGATGAACAAACGGGATGTACTCTTTCGCGTCT GCTTTCCATCAGGATATTTGCAAATATCTGACGACCTGCTTTTGACAGAA CCCTCTAATATTAACGACTCCTATATATGCTGACCACAAGATTTGGACGT GTTATGGAATAGCCTGACATAATATCGCTactaattttatttttcctact taTTCCTTCAGCTTCCCTTGAAGAGATTTTCGGTCAAGGAACAGATGGGA TTGTCATCAGAACAGATAGCGAAATGA

Coding sequence (CDS) from alignment at sc0000395_pilon:67465..70191+

>XLOC_020995 ID=XLOC_020995|Name=XLOC_020995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=624bp|location=Sequence derived from alignment at sc0000395_pilon:67465..70191+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGACAGCCAAGTAATACAATGcgaaattgacaaaaatgatcTGTT
TGGTTTGGAAGGATACGAGCGAATTCCAATCTCATTCCAAAGGGGAAGCT
ACTTTGATACAGTAGAGTACCAATTCGTGCCAGAAATCTACACCTACTAT
ATAATGGATAAAAGAAAACTCACTTATAAACAGGCTACTTCATTTATGTG
CGGGAAACATCAGCCAACGGCATATCACGTAAGCAAGCTCAATCAGATGG
ATGACAGCCAAGTAATACAATGcgaaattgacaaaaatgatcTGTTTGGT
TTGGAAGGATACGAGCGAATTCCAATCTCATTCCAAAGGGGAAGCTACTT
TGATACAGTAGAGTACCAATTCGTGCCAGAAATCTACACCTACTATATAA
TGGATAAAAGAAAACTCACTTATAAACAGGCTACTTCATTTATGTGCGGG
AAACATCAGCCAACGGCATATCACGTAAGCAAGCTCAATCAGCTTCCCTT
GAAGAGATTTTCGGTCAAGGAACAGATGGGATTGTCATCAGAACAGATAG
CGAAATGACTTCCCTTGAAGAGATTTTCGGTCAAGGAACAGATGGGATTG
TCATCAGAACAGATAGCGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_020995XLOC_020995-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000395_pilongenomesc0000395_pilon:67465..70191 +
Properties
Property NameValue
Aaloc247-312:2662
Aaloc1-246:1