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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:491334..494463+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020956 ID=XLOC_020956|Name=XLOC_020956|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3130bp|location=Sequence derived from alignment at sc0000168_pilon:491334..494463+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGCTTTAAACCACCAAAGCAATGGGTGTTAACTGAACAAGAGAC
AATCACTTCCTTTGCAAGTTGGCAAAGCAATATTATTTACCATCTGAGTC
TGAACAATGAATTTGCTCAGTTCATCGAACCGACTGCTGCTTGGCAAAAG
CAATCCGTTACAAACAGGGGTCTCGCCAACGACCCAAATACAGTTCCAGA
AAACCGCAGACGAACCGCTTTGCAAAAGAACATACTCCTTGATCAAATGC
TGGGACTAATAGCACAATTCTCGCCTTCATTATTACGCTCGGACATCATC
AAACGTAGCACCAGTCTTCAATGGATATGGCAGAGAATCAGAAAGCACTA
CTCATTTTGCCAGTCTGAAGttaactttttaaaactttcgaCTATCAAAC
GCCAAGAAGGAGAAAGATTTGAGACATTATTCCAAAGAATCGTTGCCCAT
ATTGAGGACAATTTACTAACAACAGAATCAGGGTTAACGCATGACGGAGC
CCTGGTAACAGAAAACGAAGAAATGTCCCCAACCACTGAGAGACTAGCCG
TATATCTATGGCTAAATTTGATTGACGAACGTCTTCCATCTTATGTCGCT
AGAGTATTTGCTCACGATCTACAATCACGCTCGCTAAAGGATATCCAACC
ACAGATATGTGCGGCAATGGACTCCTTACTTACCGAATTAAATGTCCAAG
AGGATATTCAAGTCAACTACTCACGCTCGAGCTACAACAATCGCCGTTAT
CCTGGAAAACCAAGTCAACGAAATTCACATCCTCAAAAATCACATCAAAA
GTCGAAAACCTGCATTCTGTGTAAGGCTGCAAGTCGACCCTACCAAGGAC
ATGATGTTTCCACATGCTGGTTCATCAGTAAATTTGACAAGAAGGAGATC
GCAAGCGCACTAGCTGTTGAAGTAGATCCTGGTAACGATCTTGAAGATCC
TCTAGATCACAGTGACGTCAAATCGTGTACATCAGCGCCTCCACCCGACA
AACTCGAACAAGGTACATCCATCGCTCGAGTTCAATCCAACTCATCGCCA
TTCTTCTACGCGTTTCTGAAACACCATACATGTCGCGTAGTTATTGACAC
GGGCGCCACATCCTCGTTAGTTTCTGCTGATTTTATCGCAAGAGCAGGGA
TCAAACTAACTCCTACATCTCATGCTGCTCGTCAAATTGATAAGACTCCT
CTCAACCTCCTCGGCGAAGCAaagtttaaattattttttggcgattatGA
ACTTCCTATTGAGGCATTAGTGACTGAATCATTAGATTGCGACATCCTTG
CAGGTGTCCCTTTCTGCAAGTCTAACAACATCGACGTGCATCTTGGTACA
GAAGAGATCTCGTTAAACCAGAAACGCATACCGTATGGTTCAAGACCCAA
TTCCATTCAACACGACATCTACCGAGTCCAATCAACTGTTTTACGAAATG
ATTCCACATCCGTTGTGTACCCAGGAGAATTCCTTGAGATTCATAACCAA
GCAATTTCACATTACGAAGGTGAGGTTGCTATCGAACCTAGAACTGACTC
GCCAGCCAATGGTAATTGGCCACCACCTACTATCTCTCGTGTGATTAATG
GAACGGTCAGAATTCCAAACGAAACGAACTCTCCTGTCTATGTATCCAAG
TCACAACACATTGCAACTATACGACGTGTCACAACACCAACACCGCCAAC
ACCTTTTCATCAGTCTGAAGTCATCTCTCCAGCTTCTAAACAACTGATCA
CAGACTGCAAACCGAAATCCATCCTTTTTTCCAGCAATATCTTAGTCGAT
CCTGACAGTCAATTGACACCTAGTGAGAAGGGACAATTTCTCCAACTACA
TAAAGACTACGACAATGTCTTTAACCCACAATTCGGTGTCTATAACGACA
ACAGTGGAAGAATACGTGCCAAACTCAATTTCGGTAATGTTGACCCTCCT
CCACGAAAACCAAAGTTACCGTTCTACAACCACACTCAGTTACAACAACT
ACAGGAGGAAGCCGATAAGTTGGAAGCCCTGGGAGTACTCGCAAAACCTG
AAGACGTGGGTGTCGACGTACAGTTTGCTTCTCCAAGTCTACTCGTAAAG
AAACCAGACGGCTCCTTTCGATTCTGCACTGCTTTCAACGAATTGTGTCA
GTACACGAAAGTCTTACCTGTCGCTTCTCAAAGCTGCGATGACGTCCTAC
GCCGTTTGTCATCGTGGAAGTACTTAATCAAGACCGACCTCaccaaaagt
ttctttcaaattcCTTTAGATTCCGCTTCCATACCGTATCTAGGAACAGT
AACACCGTTTAAAGGACTGCGTATCTACCTTCGTTCCGCTATGGGTATGC
CAGGCTCTTCGGAACATTTGCAAGAACTGACATCCCGTGTTCTTGGTGAT
TTTATCCAAGAAGGATTTGTTACTGTCCTTGCCGACGACCTTCACGTTGG
AGGAAACACTATCCAAGAGACATATATTAATTGGTCCCGCGTAATCCATC
GATTGAGAGAGAACAACCTTACTCTCTCGGCCAGTAAAACCGTAATCTGC
CCCAAATCTACCACCGTGCTTGGATGGAGATGGACATCCGGACAGCTGTC
TGTCACTCCTCACAAGATCTCGCCTTTGGTTGCATCAGCACCACCCACAA
CGTGCACTGCTATGCGTTCTTATATCGGTGCATACAAAGCAATCGCTAGA
TGTATCCCTCGACACTCATCGCTGTTATCGCCACTAGAAgcaatcatcaa
aaacatggaCGGTTCTCAGAAAATCAATTGGTCACCTGAGGACTTAGCTC
ATTTCAAGTCATCTCAAGATGCTCTCAAATCACCAAGCATCCTTACCATC
CCGACTCCTGATGATCAACTTATCATGACTGTCGATGCCGCTCCAGTGAA
CAATGGTATTGGTGCCACCCTCTACATCCTACGAGACAACAAACGTTCTC
TTGCAGACAACTTCAGCCTCAAACTGAAGGAGCACCAGTACGGATGGCAG
CCTTGCGAACATGAGGCTCTAGCCATAACTGCGGGTGTGAAACACTTCTC
ACCGTACATCCGCGAATCCAAAAACCCTTTACAACTTCTTTCGGACAATA
AGCCGTGTGTCCAGGCATTTGCCAAGTTGA Coding sequence (CDS) from alignment at sc0000168_pilon:491334..494463+ >XLOC_020956 ID=XLOC_020956|Name=XLOC_020956|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5682bp|location=Sequence derived from alignment at sc0000168_pilon:491334..494463+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGCTTTAAACCACCAAAGCAATGGGTGTTAACTGAACAAGAGAC
AATCACTTCCTTTGCAAGTTGGCAAAGCAATATTATTTACCATCTGAGTC
TGAACAATGAATTTGCTCAGTTCATCGAACCGACTGCTGCTTGGCAAAAG
CAATCCGTTACAAACAGGGGTCTCGCCAACGACCCAAATACAGTTCCAGA
AAACCGCAGACGAACCGCTTTGCAAAAGAACATACTCCTTGATCAAATGC
TGGGACTAATAGCACAATTCTCGCCTTCATTATTACGCTCGGACATCATC
AAACGTAGCACCAGTCTTCAATGGATATGGCAGAGAATCAGAAAGCACTA
CTCATTTTGCCAGTCTGAAGttaactttttaaaactttcgaCTATCAAAC
GCCAAGAAGGAGAAAGATTTGAGACATTATTCCAAAGAATCGTTGCCCAT
ATTGAGGACAATTTACTAACAACAGAATCAGGGTTAACGCATGACGGAGC
CCTGGTAACAGAAAACGAAGAAATGTCCCCAACCACTGAGAGACTAGCCG
TATATCTATGGCTAAATTTGATTGACGAACGTCTTCCATCTTATGTCGCT
AGAGTATTTGCTCACGATCTACAATCACGCTCGCTAAAGGATATCCAACC
ACAGATATGTGCGGCAATGGACTCCTTACTTACCGAATTAAATGTCCAAG
AGGATATTCAAGTCAACTACTCACGCTCGAGCTACAACAATCGCCGTTAT
CCTGGAAAACCAAGTCAACGAAATTCACATCCTCAAAAATCACATCAAAA
GTCGAAAACCTGCATTCTGTGTAAGGCTGCAAGTCGACCCTACCAAGGAC
ATGATGTTTCCACATGCTGGTTCATCAGTAAATTTGACAAGAAGGAGATC
GCAAGCGCACTAGCTGTTGAAGTAGATCCTGGTAACGATCTTGAAGATCC
TCTAGATCACAGTGACGTCAAATCGTGTACATCAGCGCCTCCACCCGACA
AACTCGAACAAGGTACATCCATCGCTCGAGTTCAATCCAACTCATCGCCA
TTCTTCTACGCGTTTCTGAAACACCATACATGTCGCGTAGTTATTGACAC
GGGCGCCACATCCTCGTTAGTTTCTGCTGATTTTATCGCAAGAGCAGGGA
TCAAACTAACTCCTACATCTCATGCTGCTCGTCAAATTGATAAGACTCCT
CTCAACCTCCTCGGCGAAGCAaagtttaaattattttttggcgattatGA
ACTTCCTATTGAGGCATTAGTGACTGAATCATTAGATTGCGACATCCTTG
CAGGTGTCCCTTTCTGCAAGTCTAACAACATCGACGTGCATCTTGGTACA
GAAGAGATCTCGTTAAACCAGAAACGCATACCGTATGGTTCAAGACCCAA
TTCCATTCAACACGACATCTACCGAGTCCAATCAACTGTTTTACGAAATG
ATTCCACATCCGTTGTGTACCCAGGAGAATTCCTTGAGATTCATAACCAA
GCAATTTCACATTACGAAGGTGAGGTTGCTATCGAACCTAGAACTGACTC
GCCAGCCAATGGTAATTGGCCACCACCTACTATCTCTCGTGTGATTAATG
GAACGGTCAGAATTCCAAACGAAACGAACTCTCCTGTCTATGTATCCAAG
TCACAACACATTGCAACTATACGACGTGTCACAACACCAACACCGCCAAC
ACCTTTTCATCAGTCTGAAGTCATCTCTCCAGCTTCTAAACAACTGATCA
CAGACTGCAAACCGAAATCCATCCTTTTTTCCAGCAATATCTTAGTCGAT
CCTGACAGTCAATTGACACCTAGTGAGAAGGGACAATTTCTCCAACTACA
TAAAGACTACGACAATGTCTTTAACCCACAATTCGGTGTCTATAACGACA
ACAGTGGAAGAATACGTGCCAAACTCAATTTCGGTAATGTTGACCCTCCT
CCACGAAAACCAAAGTTACCGTTCTACAACCACACTCAGTTACAACAACT
ACAGGAGGAAGCCGATAAGTTGGAAGCCCTGGGAGTACTCGCAAAACCTG
AAGACGTGGGTGTCGACGTACAGTTTGCTTCTCCAAGTCTACTCGTAAAG
AAACCAGACGGCTCCTTTCGATTCTGCACTGCTTTCAACGAATTGTGTCA
GTACACGAAAGTCTTACCTGTCGCTTCTCAAAGCTGCGATGACGTCCTAC
GCCGTTTGTCATCGTGGAAGTACTTAATCAAGACCGACCTCaccaaaagt
ttctttcaaattcCTTTAGATTCCGCTTCCATACCGTATCTAGGAACAGT
AACACCGTTTAAAGGACTGCGTATCTACCTTCGTTCCGCTATGGGTATGC
CAGGCTCTTCGGAACATTTGCAAGAACTGACATCCCGTGTTCTTGGTGAT
TTTATCCAAGAAGGATTTGTTACTGTCCTTGCCGACGACCTTCACGTTGG
AGGAAACACTATCCAAGAGACATATATTAATTGGTCCCGCGTAATCCATC
GATTGAGAGAGAACAACCTTACTCTCTCGGCCAGTAAAACCGTAATCTGC
CCCAAATCTACCACCGTGCTTGGATGGAGATGGACATCCGGACAGCTGTC
TGTCACTCCTCACAAGATCTCGCCTTTGGTTGCATCAGCACCACCCACAA
CGTGCACTGCTATGCGTTCTTATATCGGTGCATACAAAGCAATCGCTAGA
TGTATCCCTCGACACTCATCGCTGTTATCGCCACTAGAAgcaatcatcaa
aaacatATGGCTAGCTTTAAACCACCAAAGCAATGGGTGTTAACTGAACA
AGAGACAATCACTTCCTTTGCAAGTTGGCAAAGCAATATTATTTACCATC
TGAGTCTGAACAATGAATTTGCTCAGTTCATCGAACCGACTGCTGCTTGG
CAAAAGCAATCCGTTACAAACAGGGGTCTCGCCAACGACCCAAATACAGT
TCCAGAAAACCGCAGACGAACCGCTTTGCAAAAGAACATACTCCTTGATC
AAATGCTGGGACTAATAGCACAATTCTCGCCTTCATTATTACGCTCGGAC
ATCATCAAACGTAGCACCAGTCTTCAATGGATATGGCAGAGAATCAGAAA
GCACTACTCATTTTGCCAGTCTGAAGttaactttttaaaactttcgaCTA
TCAAACGCCAAGAAGGAGAAAGATTTGAGACATTATTCCAAAGAATCGTT
GCCCATATTGAGGACAATTTACTAACAACAGAATCAGGGTTAACGCATGA
CGGAGCCCTGGTAACAGAAAACGAAGAAATGTCCCCAACCACTGAGAGAC
TAGCCGTATATCTATGGCTAAATTTGATTGACGAACGTCTTCCATCTTAT
GTCGCTAGAGTATTTGCTCACGATCTACAATCACGCTCGCTAAAGGATAT
CCAACCACAGATATGTGCGGCAATGGACTCCTTACTTACCGAATTAAATG
TCCAAGAGGATATTCAAGTCAACTACTCACGCTCGAGCTACAACAATCGC
CGTTATCCTGGAAAACCAAGTCAACGAAATTCACATCCTCAAAAATCACA
TCAAAAGTCGAAAACCTGCATTCTGTGTAAGGCTGCAAGTCGACCCTACC
AAGGACATGATGTTTCCACATGCTGGTTCATCAGTAAATTTGACAAGAAG
GAGATCGCAAGCGCACTAGCTGTTGAAGTAGATCCTGGTAACGATCTTGA
AGATCCTCTAGATCACAGTGACGTCAAATCGTGTACATCAGCGCCTCCAC
CCGACAAACTCGAACAAGGTACATCCATCGCTCGAGTTCAATCCAACTCA
TCGCCATTCTTCTACGCGTTTCTGAAACACCATACATGTCGCGTAGTTAT
TGACACGGGCGCCACATCCTCGTTAGTTTCTGCTGATTTTATCGCAAGAG
CAGGGATCAAACTAACTCCTACATCTCATGCTGCTCGTCAAATTGATAAG
ACTCCTCTCAACCTCCTCGGCGAAGCAaagtttaaattattttttggcga
ttatGAACTTCCTATTGAGGCATTAGTGACTGAATCATTAGATTGCGACA
TCCTTGCAGGTGTCCCTTTCTGCAAGTCTAACAACATCGACGTGCATCTT
GGTACAGAAGAGATCTCGTTAAACCAGAAACGCATACCGTATGGTTCAAG
ACCCAATTCCATTCAACACGACATCTACCGAGTCCAATCAACTGTTTTAC
GAAATGATTCCACATCCGTTGTGTACCCAGGAGAATTCCTTGAGATTCAT
AACCAAGCAATTTCACATTACGAAGGTGAGGTTGCTATCGAACCTAGAAC
TGACTCGCCAGCCAATGGTAATTGGCCACCACCTACTATCTCTCGTGTGA
TTAATGGAACGGTCAGAATTCCAAACGAAACGAACTCTCCTGTCTATGTA
TCCAAGTCACAACACATTGCAACTATACGACGTGTCACAACACCAACACC
GCCAACACCTTTTCATCAGTCTGAAGTCATCTCTCCAGCTTCTAAACAAC
TGATCACAGACTGCAAACCGAAATCCATCCTTTTTTCCAGCAATATCTTA
GTCGATCCTGACAGTCAATTGACACCTAGTGAGAAGGGACAATTTCTCCA
ACTACATAAAGACTACGACAATGTCTTTAACCCACAATTCGGTGTCTATA
ACGACAACAGTGGAAGAATACGTGCCAAACTCAATTTCGGTAATGTTGAC
CCTCCTCCACGAAAACCAAAGTTACCGTTCTACAACCACACTCAGTTACA
ACAACTACAGGAGGAAGCCGATAAGTTGGAAGCCCTGGGAGTACTCGCAA
AACCTGAAGACGTGGGTGTCGACGTACAGTTTGCTTCTCCAAGTCTACTC
GTAAAGAAACCAGACGGCTCCTTTCGATTCTGCACTGCTTTCAACGAATT
GTGTCAGTACACGAAAGTCTTACCTGTCGCTTCTCAAAGCTGCGATGACG
TCCTACGCCGTTTGTCATCGTGGAAGTACTTAATCAAGACCGACCTCacc
aaaagtttctttcaaattcCTTTAGATTCCGCTTCCATACCGTATCTAGG
AACAGTAACACCGTTTAAAGGACTGCGTATCTACCTTCGTTCCGCTATGG
GTATGCCAGGCTCTTCGGAACATTTGCAAGAACTGACATCCCGTGTTCTT
GGTGATTTTATCCAAGAAGGATTTGTTACTGTCCTTGCCGACGACCTTCA
CGTTGGAGGAAACACTATCCAAGAGACATATATTAATTGGTCCCGCGTAA
TCCATCGATTGAGAGAGAACAACCTTACTCTCTCGGCCAGTAAAACCGTA
ATCTGCCCCAAATCTACCACCGTGCTTGGATGGAGATGGACATCCGGACA
GCTGTCTGTCACTCCTCACAAGATCTCGCCTTTGGTTGCATCAGCACCAC
CCACAACGTGCACTGCTATGCGTTCTTATATCGGTGCATACAAAGCAATC
GCTAGATGTATCCCTCGACACTCATCGCTGTTATCGCCACTAGAAgcaat
catcaaaaacatTTCTCACCGTACATCCGCGAATCCAAAAACCCTTTACA
ACTTCTTTCGGACAATAAGCCGTGTGTCCAGGCATTTGCCAAGTTGATTC
TCACCGTACATCCGCGAATCCAAAAACCCTTTACAACTTCTTTCGGACAA
TAAGCCGTGTGTCCAGGCATTTGCCAAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:491334..494463 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2758-2841:3047 |
| Aaloc | 1-2754:1 |
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