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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:1168058..1174289- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020773 ID=XLOC_020773|Name=XLOC_020773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6232bp|location=Sequence derived from alignment at sc0000098_pilon:1168058..1174289- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGCGCGACCACGCGTAAATTTGTTGGGGAAGGAAGGAGAGGAGAAAA
CCACGTAGCGAAAAACAAATTTGTTTTGAAATTGAAGATTGGTTTTATGA
TATTCAATAGAACTCGATCATTTTTTTCTTTTATCAAACAAATACAAACG
ACTCAACTCAAACAATTTTACCCATCTTTTCATCATCAATATTATAGAAC
ATCAATTCTCAACATGGCTGACAGCGGTGAAAAACTCAGCAAAAAGTAAG
TTATATTTCTTGTGAATCCACCTGTAAAGCCTGACAATATCCTCCAAAGG
AAGGACAATTTCTTCTGGTGTCAATAATTGCCATTTTTCTTGTATTTTTT
TTAACACTTGATAGACCGTTTTACCACAAATTCTGTGATTTGCATCTATT
CAATCAACTACACCGTCAAACGGTTCTAAAGCTTGGCAGTTACATCAAAA
TGCCTCGAAAATGTCAATATGAAAATTGCGTAATCAGAGAACGTATGTCT
CGCTCATTATAAAAAGGCCGAGACAAACTTTCAGTAATTGGATTGTAACA
TCGAGTTAAGTCTCTTTTGTTAAGTCACCAGGGGGAAAATAAAACAGACC
TTGATACATTTATCGTTTGTTTCAACTTGACCATTTGTTTAAAACTCAGC
CTCCTAAATATTTGGAATAGGTAAAATATGCACAAAGAAATTCATACTTT
TCCAACCCGGCCAATCTTTAAAAAAGAAGCGAATAATAAAATGTAATTAC
CCTTTCCAAATAAACCTCTTCGGTGGCGAGCGTAGTCTACTCTGACGTAA
TTGTAAAATTTATGTAATGGGAGTTTGACATAGTAATATAATGTTGTTTG
GGGAATTATGAAGTTCTCTGGGATTTTGATTGCATTTATTCAGGTTGATT
TTTTATGACTTCTAATGGTACTTTTTCTAACGAGTTTGATTACTCTGTTC
TCACACTTATGTCTTTTTTTTTCACGTCCTTTTCCGTGATTACTTTTATT
TATATTTTTAAAGACAGGTAAGAAGGCATATTGATGTAACTGCTTGGGAC
GATTGGTCAGATCTTAGGATGGTTGATTTCTGGACATAATCATACTTTTT
GTCATAATAGTCCCGCTGCTGAGGTCGATAAATGTTTCATTCCGTGACAC
ACATCTTAGAACTAACTTTTTTTGGTGGAAACTCACGAATTAGTATATGT
AGATTCCAAAATCAAAAAGTTTCCACAATATTATCGTGCAAGTAACGAGT
AATTGGCGATTTTTTGCGTTTCCAGGCAAAATTGCAAGGCCTGGAAATTT
ATGATTTTTGGGGGGTCTTCAAATTAAAAAAAGACCTATATCACATGATA
GAGCTTTTCAAACTGAGCAAAAAAGTGTATTACATCAAAGTCCCAACTTC
TCTAGATCAAAAGTTATGGGCCTATTTGTGGTCAAAAAGGTGTTTAATTT
TGCATAAATTAATGCAGATTGTGGGGAAATTCCCTGTTTTCCATCAGTTC
TCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTGTGTGTGTGTCTGTCT
GTCTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAAT
TGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTG
GGGGTGTTTTTTTCATTTTTCAAAAATTTTGATTTTGGGCCTGGGACGAG
TTTTCGCCAAAACGAGCTAAAACTTTGGGGCAGCCTGGAAACTTCAAAAA
TGGTCGGATTTGGTTGAAAATTTGCACCACTCGTTCCTTAGGTGAATATC
TGGGGTGTTTTTTCCATTTTTTGAAATTTTGTTTTGGGGACTGGGGACGA
GTTTTTCGCCAAAACGAGGCTAAAATTTTGGGGCAGCCTGGAAACTTCAA
AAATGGTCGGATTTGGTTGAAATTTTGCACACTCGTTCCTTAGGTGAATA
TCTGGGGGTGTTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCTGG
GCACGAGTTTTTCGCCAAAACGAGGCTAAGACTTTGGGGCAGCCTGGAGA
CTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCACACTTTGTTCCTTGG
GTGAATATCTGGGGGCGTTTTTTACATTTTTTGAAAATTTTGATTTTTGG
GGCCTGGGAACGAGTTTTTTGCCAAAAAGAGGCTAAAGCTTTGGAGCAGT
CCAAAATGATCGGATTTGGTTGAAATTTGGCACACTTGTTCATTGGGTGA
ATATCTGGGGGTCTACAATTGGGCCTATGAATGATTTGAAGCCACTGAAG
TTGAGCCCAGTGCGTTGCGCACGTTCGACTATTTTTTAACAGGTCACAAT
AACTTTCACTGATAGCGTGCCCTTTTTAACTTTTTTGTTTTCATTCAAAA
TGACTGGATATTGGAGACTCCAATATTGGAGAATTAGAGAACGCCCGCCG
CCTACTAACCGCCTATTGCCCGATGTGATCAACAAATAACGAGTGTGTAA
CTCCATCGTTTTGCCACTAATTTGGTATTCTTTGTTCCAGACATTCAGAT
TTTTTTCATATTTCAATTTAATAGCCTACTTGGTGCTATTTTCTTTAATA
AGCCGTTCGTTTAACTCAAATCAAATGACTTTGGAAGTTCAGTGAAATGG
TGACCGAATTGCCAACCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAG
TTGACGGTAAAGCATCTTCTGAAAATTTCGTTCTTCCCGCCATATATAAA
TGCGAAAATGAAAAGCGAAAAAATTTTCATTTTGTAATTGTTATTTTATT
CTGCCATAAAGAATGACACGTTCTCCTTCTCCTAATAACAGTATAGACCA
AAACTCCTATATCAAGATTACAAGATTTGGAGTGCGGGCCGTTTTTACTT
TCATTTTCAGTGGTTTCACGTTCGATTTCAAGCCAACATCTTAGCAACGG
GGTGCTCACCGATAGTTACAGGGGTTTGTGCAAAAAAACAAACTTAGAAA
GTTTTCCAAATCCCTTATTTATTGCACTAATTCTTCAGTATGGACTTACA
GGTATATGTACCGCAAAACCCACACTAAATTTCTGATCTAAACAATTATT
TTTTGGACTGCCTTTATCAAGAAACTTGTTTGATGGTGCAAGGAGTCCCA
TGAAAAGAGTTCTTCCTGATATTTTTCAATATCATATGTTAGACAGTGTT
AGATTGTTTTTATGTCATTGCTTTTTAAAATTTTCATTTTTTTTGAATAC
GTACCTCAAAACCCACATTTTTATTATTGATGATATCTTTAAGTCCACTG
GGTCAATCAAGGTAAAATTTTGCACCTGTACATCTAGGTAAGTTTGTTTT
AAAACTATTCATAAGTTGATAAGTTAGTCTCAATAGAATTACCTATTACA
CCACAGAACCCACAATAGATGTACCTCAAAACCCACAAGGGAGTTTTGCA
AATTATTTCTCCCCTCGTTATATTTCTACCTGAAACTTTTTGACAATTGA
TTTTGTATTTCATATAGGTATTTTGTATGTAAAAATTAAGGCTTACATGT
TTTCCTAATTGTGTTGAAATGATTTTGGAAACTGCATTGACTTTTACCCA
ACCAATAATGCTCAATTTTGTTTTAAATAATAAAGAAACTATTATACCAA
CATAATCTTAAAAGTTATGCTAATAAAAACATTTTAGATTTTTCTAAAAC
TCCTGAAATGAAATTGTTGCTTTTGAGGTACCTGTGGGTTTTGTGGTACA
TATACCTGTAAACTCGTATATCAAGATTACGAGATTTCCAGTACGGGCCG
ATTTTACTTTCGTTTTCAGTGGTTTCACTTTTGATTTCAAGCCAACATCT
TAGCAACCGGGTGCTTGCCCATAGTTACAGGGAATTGTGCAAGAAACCAA
ATATAAGAAGTTTTCCAAATCCCCTATTTCAATTAAACCAATAAAAAATG
AAACTTTTCCATGTTTCACTTTTTTGCAGCCAATTCTTCAAAATGAAAAT
ATTAAAGATTTGAAGTTCTTCTTTTATTTAATGATTATTTACGGCACTTT
GTTGACAATCTAACTCTTGCATCAAATTCTCACTTTCTTCAGTAAATTGA
AGATGAGAAAAAAACCTAAGCCTTAGAATCACAGATTGAAGAAAATATAT
GAAGGGTGGGATTTTACAGCCACCAGTCGTGCAATGCACTGAGAGGTCAC
GGGTGCCAAAAAGAAGGGCCATTTGAAATGCAGCAACCTCATTGGTAGAC
AGGAGACCCGTCCTGTATTTTTATAATCTGATGTATATAGGACGGGTATG
ACCTGTGAGGCAGATTTCTGCGTCAAAAAATTTACAAAGGGAAATCACTT
ACTAAAATAAAAACCAAATTTCAGAACTTGGGCTTTCTCTAAGAAAGTGT
GACCAGTAAAAGAATAACAAATTTTATTAGCTAAATTTTCAACCGTTAAT
CAGGCCTGGCCATGAAGAAAAGCCTGTGTGTGCCATTATAGCACTTGCAA
GCCTTAAATTTGGACTTTCAATACCTGTTTTTGCTTGATTTAGGCGTGCT
ATTTTAGCACTCGCAAATAATTTTACGTGTGTGCTAGCGTGTGCGCGTGC
TATAGCACGCCATTCAAAGCCAGGCCTGGTTAATAGGATCTGGAAAATTC
AAACTCTCAGCCCATACCATGCTATATATTTCGCCATCGGTATATAGAAT
AAGTAATCATAGCATGGATCTCCAGCCTACCTCATTGGTGGAAATTTTAT
AAACAGCTGCGAAGGAGTGCCAGGAAGCAATCAGTATAAGAAACCACTTT
CGTTTTTGTTGCAGATTTTGATATAAACTTCTCTCAGTCAGGGATTACTT
GGCAATGTGTTGTGTCAACTTGTCAGCATTGTATTTGTTGTAAAGAGGTA
ACACTAGCCTAGTTTCTAATCCTGCTATAAGAGTTTAAGTTTAAACTATT
CTTCAAAATGAAAATATTTAAGATTTTAAGTTCTTCTTTTATTCAATGAT
TTTTTACGGCAGGACTTATTTTAGTAATTCCAAGAGGGGCAGCGTCCGAT
AATCAGACGCTTAAAGGGCATGAAAAAGTGCCTAACTCCCTCTGAAGCAA
GAAACTAGCAATTTTCAAACCACATGTCTGTCTTATCTTTCTTTACAGTG
AATTAAAGAGAAGGCTGAAAGCAGAACAAAAAGCAAAAGAAAAAGCTGAA
AAATTGGCTGAAAGACAAAAGGTATATTCTTGTCAATAAAAATTTGTATA
AATTGTTATAACTTTTAATTGATGTGTGAATCTATATAATAACCTTTCTA
TTAATATGCTAATGTATAATCATAATCAAATTTTATCTTAGTGTTTTTAC
GTAAGCAATATCTACTCCATTTTTACAGACAGAAGCTGCCAAACCAACAA
AGCAAAAGAAAGATGCTGAGGGTGGAGCTGTCGAAGATGAAGAAATCTTA
GACCCAAATCAATATTATAAGATCCGTCAACAATCTGTCGCTAATTACAA
AAAGAAGGGTGAAAACCCCTACCCTCATAAGTTTAATGTGGACATCTCTT
TGACGGAGTTCATTGAAAAATACAATAATGTTGAACCAGGAACATGGCAT
GACGATCGTGTATCAGTAGCAGGTATTCTTTTTTCTTGGATGTTGTGAAA
GATGTTCAGTGCTAGTGAGTTTGTATATAGCATCATTATGTTAAAAAGAT
AGCTCCTTCACCTTACTAAGAGCTCAAAATGATACCTGTTTTATTTCAGG
TCGAATTCATGCAAAAAGATTATCTGGACCTAAATTGATCTTTTATGACT
TGAGAGGGGAAGGTGTCAAAATTCAAATTATGGCTGACCAAAGGTATGAT
ATTGATATCTGCTTGTTCATAGTCAAGACAACACAGTAACCAGATTTTTT
TTCTAGCTTGTTCATTGACCTTTTTCTAACATTCTTTCTGTTTGCATAGA
TCTTCAGAACAAGATTTTGGATACATCCATGGCAAGATCAGACGTGGTGA
CATCGTTGGTGTCAAAGGACGACCAGGTAAAAGATTCATGTTATTGGTTA
ACAAGTATATTATAATATCAGAATTTGAACCCTTGTTTAATAAAGTCTTT
TTTTATTATATGACAATTCAATGACTTTTAATGTTCCTTGTAGGTAAAAC
AAAGAAAGGAGAATTGAGTATCCAGCCATCAGAAATTGAACTTTTATCGC
CATGTTTGCATATGTTACCACATTTACATTTC Coding sequence (CDS) from alignment at sc0000098_pilon:1168058..1174289- >XLOC_020773 ID=XLOC_020773|Name=XLOC_020773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000098_pilon:1168058..1174289- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGCGCGACCACGCGTAAATTTGTTGGGGAAGGAAGGAGAGGAGAAAA
CCACGTAGCGAAAAACAAATTTGTTTTGAAATTGAAGATTGGTTTTATGA
TATTCAATAGAACTCGATCATTTTTTTCTTTTATCAAACAAATACAAACG
ACTCAACTCAAACAATTTTACCCATCTTTTCATCATCAATATTATAGAAC
ATCAATTCTCAACATGGCTGACAGCGGTGAAAAACTCAGCAAAAAATCAG
CGCGACCACGCGTAAATTTGTTGGGGAAGGAAGGAGAGGAGAAAACCACG
TAGCGAAAAACAAATTTGTTTTGAAATTGAAGATTGGTTTTATGATATTC
AATAGAACTCGATCATTTTTTTCTTTTATCAAACAAATACAAACGACTCA
ACTCAAACAATTTTACCCATCTTTTCATCATCAATATTATAGAACATCAA
TTCTCAACATGGCTGACAGCGGTGAAAAACTCAGCAAAAATGAATTAAAG
AGAAGGCTGAAAGCAGAACAAAAAGCAAAAGAAAAAGCTGAAAAATTGGC
TGAAAGACAAAAGTGAATTAAAGAGAAGGCTGAAAGCAGAACAAAAAGCA
AAAGAAAAAGCTGAAAAATTGGCTGAAAGACAAAAGACAGAAGCTGCCAA
ACCAACAAAGCAAAAGAAAGATGCTGAGGGTGGAGCTGTCGAAGATGAAG
AAATCTTAGACCCAAATCAATATTATAAGATCCGTCAACAATCTGTCGCT
AATTACAAAAAGAAGGGTGAAAACCCCTACCCTCATAAGTTTAATGTGGA
CATCTCTTTGACGGAGTTCATTGAAAAATACAATAATGTTGAACCAGGAA
CATGGCATGACGATCGTGTATCAGTAGCAGACAGAAGCTGCCAAACCAAC
AAAGCAAAAGAAAGATGCTGAGGGTGGAGCTGTCGAAGATGAAGAAATCT
TAGACCCAAATCAATATTATAAGATCCGTCAACAATCTGTCGCTAATTAC
AAAAAGAAGGGTGAAAACCCCTACCCTCATAAGTTTAATGTGGACATCTC
TTTGACGGAGTTCATTGAAAAATACAATAATGTTGAACCAGGAACATGGC
ATGACGATCGTGTATCAGTAGCAGGTCGAATTCATGCAAAAAGATTATCT
GGACCTAAATTGATCTTTTATGACTTGAGAGGGGAAGGTGTCAAAATTCA
AATTATGGCTGACCAAAGGTCGAATTCATGCAAAAAGATTATCTGGACCT
AAATTGATCTTTTATGACTTGAGAGGGGAAGGTGTCAAAATTCAAATTAT
GGCTGACCAAAGATCTTCAGAACAAGATTTTGGATACATCCATGGCAAGA
TCAGACGTGGTGACATCGTTGGTGTCAAAGGACGACCAGATCTTCAGAAC
AAGATTTTGGATACATCCATGGCAAGATCAGACGTGGTGACATCGTTGGT
GTCAAAGGACGACCAGGTAAAACAAAGAAAGGAGAATTGAGTATCCAGCC
ATCAGAAATTGAACTTTTATCGCCATGTTTGCATATGTTACCACATTTAC
ATTTCGTAAAACAAAGAAAGGAGAATTGAGTATCCAGCCATCAGAAATTG
AACTTTTATCGCCATGTTTGCATATGTTACCACATTTACATTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:1168058..1174289 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-876:88 |
| Aaloc | 712-786:283 |
| Aaloc | 619-708:482 |
| Aaloc | 373-615:855 |
| Aaloc | 301-372:1084 |
| Aaloc | 55-297:6233 |
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