XLOC_020476.2 (mRNA) -

Overview
NameXLOC_020476.2
Unique NameXLOC_020476.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000309_pilon:336611..337585+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020476.2 ID=XLOC_020476.2|Name=XLOC_020476.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=975bp|location=Sequence derived from alignment at sc0000309_pilon:336611..337585+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCTGTTCCTGTGTCTACGCAAGATTCAAAAGACGAGACGGCTCATT CTCGTGTCAACTTGTCTTTGCTCGCACACGTGTTGTTCCCAAAGATATGA GCCTGCCGAGAGCCGAACTGTATGCAGCTCTGACAACTGCTTACACTGGG GAAATAGTCAGAAGATCATTCAAGAACTACCACAAGAGCTCCATCAAATT TACTGACAGTCAAATCTGCCTTCACTGGTTATCAAACAACGAAAGACCAT TGAAGCTCTGGACCAGAAATAGAGTTATTGAAACACTCAGATTCACACCC AAAGAAGAATGGTGCTATGTTCAATCTGAAGACATGGCAGCGGACATTGG TACAAGGAAAGGTGCCACCATCAATGATGTTGATCAAAACTCAACATGGA TCAACGTATTTCCTTGGATGACACTGCCTCAATCATCTTTTCCAATGCTT TCATCTGAAGAAATCAAACTTAATGAAGCAGACTCATTGGAAGCCAAGAA AGAATTTGATGCCCACTTTGTCAAACAAATGCCAGATGTCAAAGACAGAT ACGCTTTCACTGGTTACCACATCGACCCCATGCGTCATTCATTCAGCAAA GTCATCAGAATCTTTGCTTACTGTGTTTGATTCTGCAACATCATTCTAAA GAAAGCTGAAATATCAAAGCCACTGACTGATGCAGACCTTGAAGCATCAA GACAATACTACTTCAGGATGGGAACTCGAGAAATTATGCAGTTTATTGAA CCCAAAAGGTATGAGAAGTTCACATCACGCAAAGGAGATCTTCTCATCTA TACTGGTCGAATTTTGCCAGATGACGAAGTCACCATTACTGGAAGATTCA CATCAGCAATGCGAGATCTGGCAGGTACAACCTTTTGCGTACCAGTATTG GACAAGGACAGCCCAGTCGCTCAAAGCCTTGCACTTGATGTACACTGGAA CCATCCTGTTTGCAAACATTCTGGT

Coding sequence (CDS) from alignment at sc0000309_pilon:336611..337585+

>XLOC_020476.2 ID=XLOC_020476.2|Name=XLOC_020476.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000309_pilon:336611..337585+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCTGTTCCTGTGTCTACGCAAGATTCAAAAGACGAGACGGCTCATT
CTCGTGTCAACTTGTCTTTGCTCGCACACGTGTTGTTCCCAAAGATATGA
GCCTGCCGAGAGCCGAACTGTATGCAGCTCTGACAACTGCTTACACTGGG
GAAATAGTCAGAAGATCATTCAAGAACTACCACAAGAGCTCCATCAAATT
TACTGACAGTCAAATCTGCCTTCACTGGTTATCAAACAACGAAAGACCAT
TGAAGCTCTGGACCAGAAATAGAGTTATTGAAACACTCAGATTCACACCC
AAAGAAGAATGGTGCTATGTTCAATCTGAAGACATGGCAGCGGACATTGG
TACAAGGAAAGGTGCCACCATCAATGATGTTGATCAAAACTCAACATGGA
TCAACGTATTTCCTTGGATGACACTGCCTCAATCATCTTTTCCAATGCTT
TCATCTGAAGAAATCAAACTTAATGAAGCAGACTCATTGGAAGCCAAGAA
AGAATTTGATGCCCACTTTGTCAAACAAATGCCAGATGTCAAAGACAGAT
ACGCTTTCACTGGTTACCACATCGACCCCATGCGTCATTCATTCAGCAAA
GTCATCAGAATCTTTGCTTACTGTGTTTGATTCTGCAACATCATTCTAAA
GAAAGCTGAAATATCAAAGCCACTGACTGATGCAGACCTTGAAGCATCAA
GACAATACTACTTCAGGATGGGAACTCGAGAAATTATGCAGTTTATTGAA
CCCAAAAGGTATGAGAAGTTCACATCACGCAAAGGAGATCTTCTCATCTA
TACTGGTCGAATTTTGCCAGATGACGAAGTCACCATTACTGGAAGATTCA
CATCAGCAATGCGAGATCTGGCAGGTACAACCTTTTGCGTACCAGTATTG
GACAAGGACAGCCCAGTCGCTCAAAGCCTTGCACTTGATGTACACTGGAA
CCATCCTGTTTGCAAACATTCTGGTATGATCTGTTCCTGTGTCTACGCAA
GATTCAAAAGACGAGACGGCTCATTCTCGTGTCAACTTGTCTTTGCTCGC
ACACGTGTTGTTCCCAAAGATATGAGCCTGCCGAGAGCCGAACTGTATGC
AGCTCTGACAACTGCTTACACTGGGGAAATAGTCAGAAGATCATTCAAGA
ACTACCACAAGAGCTCCATCAAATTTACTGACAGTCAAATCTGCCTTCAC
TGGTTATCAAACAACGAAAGACCATTGAAGCTCTGGACCAGAAATAGAGT
TATTGAAACACTCAGATTCACACCCAAAGAAGAATGGTGCTATGTTCAAT
CTGAAGACATGGCAGCGGACATTGGTACAAGGAAAGGTGCCACCATCAAT
GATGTTGATCAAAACTCAACATGGATCAACGTATTTCCTTGGATGACACT
GCCTCAATCATCTTTTCCAATGCTTTCATCTGAAGAAATCAAACTTAATG
AAGCAGACTCATTGGAAGCCAAGAAAGAATTTGATGCCCACTTTGTCAAA
CAAATGCCAGATGTCAAAGACAGATACGCTTTCACTGGTTACCACATCGA
CCCCATGCGTCATTCATTCAGCAAAGTCATCAGAATCTTTGCTTACTGTG
TTTGATTCTGCAACATCATTCTAAAGAAAGCTGAAATATCAAAGCCACTG
ACTGATGCAGACCTTGAAGCATCAAGACAATACTACTTCAGGATGGGAAC
TCGAGAAATTATGCAGTTTATTGAACCCAAAAGGTATGAGAAGTTCACAT
CACGCAAAGGAGATCTTCTCATCTATACTGGTCGAATTTTGCCAGATGAC
GAAGTCACCATTACTGGAAGATTCACATCAGCAATGCGAGATCTGGCAGG
TACAACCTTTTGCGTACCAGTATTGGACAAGGACAGCCCAGTCGCTCAAA
GCCTTGCACTTGATGTACACTGGAACCATCCTGTTTGCAAACATTCTGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_020476.2XLOC_020476.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309_pilongenomesc0000309_pilon:336611..337585 +
Properties
Property NameValue
Aaloc1-975:1