|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:147160..154217- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019924 ID=XLOC_019924|Name=XLOC_019924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7058bp|location=Sequence derived from alignment at sc0000179_pilon:147160..154217- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCTTACAGTACGTGAAATTTTGACTTTTAAGTCAATTTATCCTCA
ACAAAATAGGGGAACAAGAAGCTCAGGTATTCCGAATACTCCCCAATCCA
CTGTATTGGAAAATCATCTCGAAAATGTACAGTAAGTCAATCTCATTTCA
TTTTTTTCTGTACTGTAAAGCTTTTTCAAGCTCTAAATCTTCAAAAATCA
GGCCAATTTGAAATCTAGGGATATGGGCAGCACACTCCCACCTTTCCCAC
AATGGATTGCAGAATATTCTTGGAAATGTGGGGAAAACAGGAAACCATAA
TCAATTAATGATAAAAATCATTGATTTTAATTTTTTTTCTTTCAAAATGT
TATAAAAGTCTTTTTTATATGCATACAGCAAAATTAGGTCAAGGCTTAAA
CATGATTAGCAAGATTTTATTTTCCTAAATCTTTATAAAAATATGTCATT
AACAAAAACCTTGCAAATTTCAGGTTAAGAAAATGCTTTTTTTATAATAG
GCAACGCTACATAAGAAACCAAGTTGTGAAAAAGTGGCCTGGAAACAATT
TGCCAACATTCAATAAGGATGATACTGACAACAAAAAGGAACTTGAAGAA
CTGGTTACAAAACTATCAGAGAACCCATTGCTTAAGTCTGTTGTTGAGGC
TGATAAAGTGAAGTCAAAAGTAATTCAAATAATGAAAGAAAGGCGAAGGA
ATGTGAGGAAAGGAATGGATTATAAGGTAAATTAGGCTTACTCGTTTTCG
TAATAACCATAGTGCTCTTTACACTTCACGTATTAGGCTTATTACTAGAA
AGCAGGCCTCCTTTAAATTTCAAATCTCTCAAGGACAAGTTCATGGATCA
AACAAACATTTCTATTGCCTTGGTTTTGCAGATGAATTATGATTTTTCTA
GGCATTTTCCTTGGGCCCATTTAATAAGTGTGTTTGTTACGGGGTAACAA
AGAGGACATAAGTATAAGTAATGCAATGAGTGTGCAATTAATGAATGAAA
TGAAGAGTTTTTCAGTTTTTCATCCAACAAAAATAATTCAAAAAACATTT
AACTTTTGGTATTACAGAACCCTCCACAGAAAACAGCTAAGAAAACGGCA
AAGAAGAAACTAGATCTGGGTACTGAAAAGGTAATAAATAGTCAAGGGGG
TCAAGGTCCCACTAAAAACATGAGGTCCCCATTCTATCTGAAACCCCCAA
TCTGTTAGTGTTATGGATGCAAAATTACGTCCTATTGGAAATTTGGAAAA
GCCTTTTTAATATTTTAGGCCTTTCATATTTAATATTTAAGAAAACAATC
CTGCGCTGCTAAAAAGTATGTCAAATAATACTTACTGCTACTTACTATTA
CTACTACTCTACTAGCATGAATAACACTTCTAGCATGAAAATTTGTCTCT
CATCAAAAGTACTCAATCAATTTTCAGGTTGATGTAGTGAATTCATCCGG
CAAGACTTCCACTGATGGCGTGGACATGACTGTATGTAAATTGAAATAAT
CAAATTTTGTGTAGAAAAAATTAGCCATTTTGGTCCAGGTGTACCAAATA
TAACTCTGTGCCAGTTTGGTATTTTTATCAAACTTGTTTTCATCAAAGGC
CCTCTAATAGTTTCACACTTCCAGTAGTTGTTCTTTTTTACAAAAAATAT
GTTAGGGTGCTATATATAGTTTTGAAAATGATTTTATCCCTTAGATTTCA
AAAGAAGTTGGAAAAAGGAAAAATCAGACAACACTCATTGGGACGTCTTC
AAAAAAGTTGAGAACTGTAAGTTTCTAAGCTCTTATTGTTTTTATGTTAG
GGATTGCTTGACCTCAGAGCAGATAATGGTTTCTGCATAAGAGTATCTGT
TCAAGTTTGTCGCACCGCTTGAGTTATTTAGAAAAAGTCTGAGAAAAGAG
GGAATTGACCTCTGTTCACCTCACTATGTTATAGTTGAGCAGTGCTCACA
CAATGGATGATTTTGATTATTAGGCTCTCAATTTTTGTCTTAAAATACCT
TTAGTCCTCATCTGACAAAGTCAAGACGCAAGATTCAAAAAAGAAAATGT
CTCCAAAGACGTCTACTAGAATAGACACACCTTCTGAAGAATCGGTAAGA
TTATACAGTGTGTTGATGGAGAGAGAGTGCTCCATCGTTATGAACATTTG
ATTGGCCGTGTTGTTAATGTTTCTGTGTTTTAATTAGTATTCCCTGTAGA
TTCTTTTAGTTTTCATGTGTCTCTTGAGTCCTCTTTTGTTTAGTGTCCCC
TTTGTTTTAAGTGTCTTTTGTATCCCCAAATTGCGTTTTATACGTTTTAT
ATATCATTTGTAATTCCTCTAGGGAAATTAGGATATGTTTATTAGCTGTA
AATTTTGTAGATAGGAATTAGTTCAACACTGAGAGACGTGAGTGAGTGTC
TTGTGTGTGAGAGGTGCGTTTTACTAAAGTTTAATTTACTGTCGTTTTAT
TTCGGTTCTTTTTGGTTTTGTTACATTTTAAGTTGGTTTAAGTTCAAGAA
TTGGTGTTTGCATTTTACATTTTCTGTTCTCCATTTTCTGTTTGGTTTCC
TTAGGTTAGGTTCCTTTTTGTCCATTAAGGCTGAGATATTTCGACCAGTC
AAATTATTCAAAATATCTTCGTTCTCTCCACTCACAAGTAAATTAAACTA
GTATCTGTATTTCTGTTTCCATCTGCATTTCTGTCTCCTATTCATATGTT
TGAGTAGTGCGTGTGCTAGAGTGTTTTGAATTTTTTTTTGATTTACTGAT
TTTGATTTTTTGTTTTTCTCATATGTTTGAGACTTTCTTTTGACTTTAGA
TTTTTTTGAATTTTGTTTCCAGATTTTTCGCTTGCCGTTTTTGAGATATT
TTACATTTTTTGTCGAGATTTTTTGATTTTTATTTCTTTGAACTTCCTGT
CACTTTTTTGAGCTGAGTTTTGAGTCCGTATACTAACGTGGTATCGTTGT
CCGCACACTAGACGTAGTGTCGTTTGTTCCGTGCAATAGACGTGTTGCCG
TGGGGTTTCCATTGGTTGGAAACTATTGTGAAGTCTTGTCTTTAGCACAA
GCATTTTGTGGCCAAATTATTCCTCAGAGAGCGAGAATTGCTTTGTTCCT
GTGTGAACAGGCGTTGTAACTCAGTAAAGCGACTTTGGTTTGTTCGAGAT
TTTTGTTTCGTTTTTTTTTTTTTTTTTTTGATTTTTTAATTTTTATTCAT
TTTGCATTTTGGGATCGGTTTGATCTTCGCTTGAAAAGAAATTTGAAGTT
TGATCATTTTTGCATTTTTTGGTCCGTCACCAACTAGAATTTTGATTGTT
CATTGTTTAGTCTCCCCATAGGGAGAGTGTTTTGAAATTGTTTTGTCTCT
TCTGAGATTTGTCTTATTGGTTTTTATTATAGCTATTTCTCCTTTTTCTC
ATCCTGAGAAGAGTTTTATGTTAATTATCTTTTAGTTCGCACGGTTCTGA
GTGTTGATTGCCATATAGTTGTCATAACATAACTTTTATTAAGAATTTTG
GATGTTAATCACTTAAGTGTGAAAATCCACCTAGATTTTATATTGAACAT
CATATATAATAACAATAATACAATTTTGGTTTCTGGATGTTAATCACTTA
AGTGTTGAAAATCCAGCTAGGTTAGGTTTTCGCCTGAAATTTTGTCATCG
TTTATAAGAACATTATACCATCCGTGTTCCACAAATTTTTATCTGTCATG
TCTGCCCATGGAAAATTTCATGCTGAAATATTTGGCAAGATTAAATCACT
TGAAAGGTTGTTATGTCATGTGTCATCTGAGTTGAAAGCTTTGAAAAATA
TTTATGTTAATTCTGCTTATAACCATAGTACCAATTTTCCATCTTGTTTT
AAATCTCCGCAAAAATCAGTATTTGTTCCTAAGCCACCATCTGCATCTAA
GCCAAAGCATGTTAGAAAATCTGTTTTTGTAAAGCCTAGTTCTGGAAAAT
CTGACATTGGTTCGAGACCTTCTGTTTTTGACTTGGAAAAATCTTCATTT
TATAAGAACAAAACCTTTAGGCAAAAGTACAATTTTATCATGAGGGAAAG
GTTATGTTTTGGTTGTCTTCAGAAAGGTCATGTGTCTGTTGATTGTAAGA
GCTCAAAAGTTATATGTAATTTGAGTCATCCTACATCACTTCATGAGTTT
AGTGTGAAAAGATCATTAATTGTTGAGAAGTCAATCTTTGTTGAACGTGA
TTCTGAAAAGGAGTCTGAAAGTTCGATCGATTTTGTTGAAAATGAATCTG
TTTGTATTACGCCTGATTCTGATCGCCAGTCGCACGTTCAAAAAGATTGT
ATGAAATCTGAAACGCCATTTATTAATGTTTCGAAAGTAAGTGAAGTATC
GTCCTATTCAAAGAAGAGAAGCTGGTCGTCCCAAACCTGGCAACATCGCA
TTGACGATCCATCCGATATTAATACAGATCCAGACCCTGATGTCCCACCC
TGGCAAATTGATCCGCCCTGACGAAGTGACGTAACACCCAATGTTCGAAA
GTTTGTGATCAAATCGAGAAAGATCAACCAAGTATGGTAAAAGATTCCCC
ACCGAAGAGCCAACGAAATTATAGATCAAGATTTGGAAAATCTTGAGGGG
AGCCATATGTTGATGGAGAGAGAGTGATTTGATTGGCCGTGTTGTTAATG
TTTCTGTGTTTTAATTAGTATTCCCTGTAGATTCTTTTAGTTTTCATGTG
TCTCTTGAGTCCTCTTTTGTTTAGTGTCCCTTTTGTTTTAAGTGTCTTTT
GTATCCCCAAATTGCGTTTTATACGTTTTATATATCATTTGTAATTCCTC
TAGGGAAATTAGGATATGTTTATTAGCTGTAAATTTTGTAGATAGGAATT
AGTTCAACACTGAGAGACGTGAGTGAGTGTCTTGTGTGTGAGAGGTGCGT
TTTACTAAAGTTTAATTTACTGTCGTTTTATTTCGGTTCTTTTTGGTTTT
GTTACATTTTAAGTTGGTTTAAGTTCAAGAATTGGTGTTTGCATTTTACA
TTTTCTGTTCTCCATTTTCTGTTTGGTTTCCTTAGGTTAGGTTCCTTTTT
GTCCATTAAGGCTGAGATATTTCGACCAGTCAAATTATTCAAAATATCTT
CGTTCTCTCCACTCACACAGTGTTAGGTCCTTTTCTTATCCTTGTGACTG
CCATTTTTGTTCAGTTGATTTCTGAAGTAAATTGTACACTAAATCAACAG
GCGTAACAGAAAATTTTGTTTGACACTAACCAGCCCACTACATTATCCAT
TTGTTGCGTTGATTATAACAACTTATCTAACCTTGTTATCTTGATAAAAA
TAAAGCTTTTCATCCTTCTTTATAACAGGAACTTTTATCTTACAGGTCAG
AGAAAACCCATTCACACGGTCACTAGGGCTGGTAAGTTTCGTTTCCCTCT
TCTTTTATATTTTTGGTTTCAATGAAAAGTTGTTGAATTTTGCTGCTACA
GGATAGCACAGTAGCAAGCATTGATGCTCTTTGCTTTTAATCAGTCTTTG
ATTTGCATTACAAAAAAACTAATTACAATTATTATCCCTAATTTAAACGT
TTGTTTTGGTTTATAGTTTTCTCCTGTTGAAGATTCACAACAATGTTCGC
AGCAAATTGAAAATTCACAGCAAACTGAAGAGTCGCCGTTCAGACTACCT
TGGGATACACCTGTTAAGGTAAGAATGTGTTTGCATTTTGTTTAAGCCTT
TTAATTTTTTTCATTTGATTATATAACACAAGAAATGCTTCTTTCAGAAA
AATTGTCTGTGAAATTAGGTGAGAATCAATAGTTGACCTCCCGTTGCCAT
TTTGAATTTAGAGGAATTTTGACATGAAGTGAAAACATCCAGGAACATCC
CTGAAGATAATTTTAGTGCTGTGGTTTTAAAAGGGTTTTTTTTCTGTTGT
TTTTGGTCATTTCAGTGTCAATTCTTAAATCATCATTTGCTTTCATCTAC
TGTACCATTCAAAGAAATTCCTTTTGTGTAAAATAACACTTGTGCTTATT
TCAAGCTTTTTCTTCATATGTTATAACATGCTCTACTTTAATACTCAGAT
CAAAAACAAGGAAGATGCTAAAGAGAAAATAAATGAATCAGGCATACATA
TTGGTCCCTTAGAAACAGATACAGGTATATACAGGTGAAATTTTGACTAC
ATCAGCAAGCATCCATGATATAATATTTGAGACAAAATTAGTCATGCTGA
AAATTTATTTGCTTCATTAAAAATTTTAAACCGATTGTGCAATAATACAA
CATACTGTATTGTGGTGTTTTTTTTTTGAGACTTTGACTTTTTGGAGCAT
TTTTTGTAATGAACTGATTTAAAATAAATTTCTTTCCTCTTACTTCAGAT
CGTAATTGTAGAAATTGAAGACTCAGAAGATTTCACTGAGGAGTTTTCAG
TTGCAGGTAAGAAGTTGGAAATTGTCTTATAACATTCAGATTTTTTTCGT
ACTTAACTTTCCTAGATCAGAAGGTATAAACACTTGCACTTGGCATTTTA
GACCAACTTTAGAAAAGGTTTTTTAGATAGAAAAAAATATCAATCTGAAC
GTACATGTTTGGAAGAAGTAGAGTATGAGCTTCCAATTCTAGTTTACATT
TTTCAAACGGTAGAACAATTATTTGTACATTTAAAGATATCGGAAATGAA
GTTAAACTTACTGTGCCAAAACTTGCTTTTTGAAAAGCTAATATGTAGTA
AGTTTCAAACATCACCTTATAATATGAATATCAGTGTGTAGATGTTGATT
AAAAAACTTACCACCAGAAATTAGTAGATTTTTAATGTGTTTCTTTTTTT
CTTTCAGACTTTGATGCAGTTGAATTCATGAATATTGCAAAAACTTATTG
CGGCATTCAAGAATTTTCTACAAGAAATGATTTGCTTAAGTATTCTCTCA
AGGCTGGTATGTTGGGTGGTATTGGTGGCAGGGCGACAATGGACCAAGGG
ATAGAAACGTTTGGGAGATGGCTGTTTGTCAACAAAAAGGTCATGGTATT
GCATAAACCAGTCGAAAACGCACTGGATATGGTCAAAATTGTGCCAAAAA
CGAAATAA Coding sequence (CDS) from alignment at sc0000179_pilon:147160..154217- >XLOC_019924 ID=XLOC_019924|Name=XLOC_019924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000179_pilon:147160..154217- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCTTACAGTACGTGAAATTTTGACTTTTAAGTCAATTTATCCTCA
ACAAAATAGGGGAACAAGAAGCTCAGGTATTCCGAATACTCCCCAATCCA
CTGTATTGGAAAATCATCTCGAAAATGTACAATGGGTCTTACAGTACGTG
AAATTTTGACTTTTAAGTCAATTTATCCTCAACAAAATAGGGGAACAAGA
AGCTCAGGTATTCCGAATACTCCCCAATCCACTGTATTGGAAAATCATCT
CGAAAATGTACAGCAACGCTACATAAGAAACCAAGTTGTGAAAAAGTGGC
CTGGAAACAATTTGCCAACATTCAATAAGGATGATACTGACAACAAAAAG
GAACTTGAAGAACTGGTTACAAAACTATCAGAGAACCCATTGCTTAAGTC
TGTTGTTGAGGCTGATAAAGTGAAGTCAAAAGTAATTCAAATAATGAAAG
AAAGGCGAAGGAATGTGAGGAAAGGAATGGATTATAAGGCAACGCTACAT
AAGAAACCAAGTTGTGAAAAAGTGGCCTGGAAACAATTTGCCAACATTCA
ATAAGGATGATACTGACAACAAAAAGGAACTTGAAGAACTGGTTACAAAA
CTATCAGAGAACCCATTGCTTAAGTCTGTTGTTGAGGCTGATAAAGTGAA
GTCAAAAGTAATTCAAATAATGAAAGAAAGGCGAAGGAATGTGAGGAAAG
GAATGGATTATAAGAACCCTCCACAGAAAACAGCTAAGAAAACGGCAAAG
AAGAAACTAGATCTGGGTACTGAAAAGAACCCTCCACAGAAAACAGCTAA
GAAAACGGCAAAGAAGAAACTAGATCTGGGTACTGAAAAGGTTGATGTAG
TGAATTCATCCGGCAAGACTTCCACTGATGGCGTGGACATGACTGTTGAT
GTAGTGAATTCATCCGGCAAGACTTCCACTGATGGCGTGGACATGACTAT
TTCAAAAGAAGTTGGAAAAAGGAAAAATCAGACAACACTCATTGGGACGT
CTTCAAAAAAGTTGAGAACTATTTCAAAAGAAGTTGGAAAAAGGAAAAAT
CAGACAACACTCATTGGGACGTCTTCAAAAAAGTTGAGAACTTCCTCATC
TGACAAAGTCAAGACGCAAGATTCAAAAAAGAAAATGTCTCCAAAGACGT
CTACTAGAATAGACACACCTTCTGAAGAATCGTCCTCATCTGACAAAGTC
AAGACGCAAGATTCAAAAAAGAAAATGTCTCCAAAGACGTCTACTAGAAT
AGACACACCTTCTGAAGAATCGGTCAGAGAAAACCCATTCACACGGTCAC
TAGGGCTGGTCAGAGAAAACCCATTCACACGGTCACTAGGGCTGTTTTCT
CCTGTTGAAGATTCACAACAATGTTCGCAGCAAATTGAAAATTCACAGCA
AACTGAAGAGTCGCCGTTCAGACTACCTTGGGATACACCTGTTAAGTTTT
CTCCTGTTGAAGATTCACAACAATGTTCGCAGCAAATTGAAAATTCACAG
CAAACTGAAGAGTCGCCGTTCAGACTACCTTGGGATACACCTGTTAAGAT
CAAAAACAAGGAAGATGCTAAAGAGAAAATAAATGAATCAGGCATACATA
TTGGTCCCTTAGAAACAGATACAGATCAAAAACAAGGAAGATGCTAAAGA
GAAAATAAATGAATCAGGCATACATATTGGTCCCTTAGAAACAGATACAG
AGATCGTAATTGTAGAAATTGAAGACTCAGAAGATTTCACTGAGGAGTTT
TCAGTTGCAGAGATCGTAATTGTAGAAATTGAAGACTCAGAAGATTTCAC
TGAGGAGTTTTCAGTTGCAGACTTTGATGCAGTTGAATTCATGAATATTG
CAAAAACTTATTGCGGCATTCAAGAATTTTCTACAAGAAATGATTTGCTT
AAGTATTCTCTCAAGGCTGGTATGTTGGGTGGTATTGGTGGCAGGGCGAC
AATGGACCAAGGGATAGAAACGTTTGGGAGATGGCTGTTTGTCAACAAAA
AGGTCATGGTATTGCATAAACCAGTCGAAAACGCACTGGATATGGTCAAA
ATTGTGCCAAAAACGAAATAAACTTTGATGCAGTTGAATTCATGAATATT
GCAAAAACTTATTGCGGCATTCAAGAATTTTCTACAAGAAATGATTTGCT
TAAGTATTCTCTCAAGGCTGGTATGTTGGGTGGTATTGGTGGCAGGGCGA
CAATGGACCAAGGGATAGAAACGTTTGGGAGATGGCTGTTTGTCAACAAA
AAGGTCATGGTATTGCATAAACCAGTCGAAAACGCACTGGATATGGTCAA
AATTGTGCCAAAAACGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:147160..154217 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 913-1161:250 |
| Aaloc | 853-909:711 |
| Aaloc | 775-849:1011 |
| Aaloc | 673-774:1493 |
| Aaloc | 637-672:1714 |
| Aaloc | 547-636:5055 |
| Aaloc | 475-546:5365 |
| Aaloc | 421-474:5632 |
| Aaloc | 358-420:5992 |
| Aaloc | 133-357:6558 |
| Aaloc | 1-129:7059 |
|
