XLOC_019812 (mRNA) -

Overview
NameXLOC_019812
Unique NameXLOC_019812
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000263_pilon:107214..115716-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019812 ID=XLOC_019812|Name=XLOC_019812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8503bp|location=Sequence derived from alignment at sc0000263_pilon:107214..115716- (Clytia hemisphaerica_ch_hm2_pilon)
GATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAAGAA GCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACGTTG ACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGACGAA GGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCACCAC AGAGTATTTCTCATTTATTTCACTGCGGTCATCTTGAAGATTTGGCAGAG TCTACATGAATTGTTATAATTTTCACTTTGAGAAGGAAAGACCATGGTTT TTACCCCCCCCCTTGAAATAAGGTGGAAGTAAAAAAATGCCTTTTGACAA AGGGGAGATTTTTGTCTTTTTTTTTTACAATAAGGGGGAGTTTTTATCAA GGGCTGCAAGAATTTATCGAAACAAGAAAAAAGGGGGAAATAAAATTTGA AATTTTTTGATTGAATTACCAATCTGTATCCTCTCTTCCCTTTTTCTTTA TTGTAAAAATTTGTTTGTTGAAGGGGATTAAAAAACATCTTAAGGGGGGC TGCTTTTTTTTAAGGGGGGACTGGGGGCATTCTGGTAATTTTTGTTCGAT TTAAGGTGGAGTTTTCTTTAAGGGCAAAGTTGCATTTTAAGGGGGGAGGG CTGAAAAAGTAGGCAGAAACCATGAAGACTACGCGAGTTCTTATTTCGCT TTAAAGAGGGAAAGGCAACGTCCTCATGTTCGTATAATTTAATCGTATAA AATGGGAAATTTCCTTTATTAGGGTACCGTCAGACAATACCGGTGAACAA GGAGATGATCAAGATGAAGATGAAGAATTGAACAAGAAAGAAGCCAAAAG GAAAGCTCGCAGGTTTCACTCATTTCTCATAACGCTTTTGTTTGGTCTGC TCGTCAGACATTTTGTAGACCCCCCCCCCTCGCACGATGCGGAAGTGTAA TTATTATTTTCTTGTTTTTGTACAGTGACAAATTAGAGGAAGATCGTTGG CTGGAAGCTCTTGAGAAAGGCGAGCTGGATGATAGTGGTGGCCTGAAGAA AGTGAAAAACAAATCACTCATGACTGCTAGACAGGTATTTTCTCTTAGTT TAGCAAGTAGCTGAACAACTTAAAGAATAAAAAAAAGGGCCATAGTGTGC AGAGGGGTCTGAACCCCCCCCCCAATTTTTATTTCATCCCCCAGTCATTC AAAACCAAAAACATTGAAATTTGTATTAAAAATATAATTATCAATTGTTT TTTAGTTGTCCTACACCAAATCAATATAAAATATGATAGATATTTTGACC AAACGTTGTTTCCCCGCTATTTTTACTTGACCCCCCTAAAATCTCAAACC CCCAATTTTATTCGAAAGATTTCTTATCCTCCCTATAAAGCACTTCTGGA AAAGTTGGATCCCTTCCTTAAAAAGGAGGGCAGGGGGTCACACTATTTTT ATTAAAGCAAACTATATAAGAATATAAGGCTTCGATGGCCAAAATGTTAA GAACAAGTTAAGAACATTTTAAGGTTTTGTGGTCAAAAATACTCACAGAA TGGTCAAAATAAGAACATGTTAAGAACATTTTAGGCTTAAAACTCAAAAA GTTAAGAATATCCTAAGGCTTCAAAATTTTTGGATGTTCTTCTAAAACAA TGTGTATCTAGAATGAATATCCACTAAATATGTGAGGTTTTTTCAGAAAT GGAAAAATGATGATGAAATAGAGGTCCATAAAAGTAAAAAAACTAATGAT AAAAGTAGCTATAAAAAGAAGAAAGCAACTCAAAAAAGTCAAGATGGAAA AAAGCAGCAGCAATATGAGTCAATAGGTAATTTCAAAAAACACATAATAT GCCCCTAAGTTATCAACCTACACAGGATTTTTGCTATTCCCAAAATTTAT ATATCGTCTTGTTTGTTGTGTCTTTAAAGTTAAACAAAATAAAAATACTT CACTTGTTCTAGAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTA TCTGATGCAACTACCAATGTGTAAGTGAAGAACAAAAAGCATATTATCAT TTCTGAAAAAAATAGTAGCGCTTCTTTTTAATAATTCATATGACTTGTGA AAGTGGCTGCCTAGAGACAAATCAGGACAAGAGACTTCTCTAACTCGTCA ATCAGACGAACCACTAGAGGAAATTCTTTGACGATTTCTTTGCACCGTAA CCAGTCGAGCACGACTAACGTCATACAACTTTTAATGGTTGCATTTCCTC GAGTGTTCAAATAAGGGACAGTTTGTGCTTTTACAACTGCATAAAATGAG AGACATCAATTACTTTCTTCTTCAGATCCTGAACGAACGGAAGAAGAGAA TGAAGAGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAAC AAATGCAACAGCAAATCGAAGAGACAAAAGTAAGCCATTTTTCCTACGTC ATTCGTCGATCTCTGGAATCAGTCTTACTTCTACTTTAAAAGGCAACCCT TCTACCTCGTTTTAGGAAGTGAAGGCGCCAGTTTCCATTCTTTACTTGAA AAAGGTCGAGAGAAGTCATTGTATTGACGTGTTCTACAGTCGAATTTCCA ACTTTCTTCGAACACGCGATCAAGAAGGGCGGAAAGCTGGTCGTCCAAAT CAAGTCTTAAATCAGGCCTGTTTAGTGATTTTTATTGATCAATTTTAACA AAACCTTTCCTTTATTTTCTTTTAGACTCAAACAGTTGAGAAGCTGCTTA CGAAGACTCAAAAAGCAAGCAAGAAGGATAAAGAGATAAAAGTAATTTAA CGTAATTTTCTTGTGTTTGGGAAATGGATTGAAATCCCTTAACAAACATT TTTGATGAACAAGCATAAAAATACTGTGTAACTATATATTGTTTTCTCTC TCCAGCAAACAAGTGGTGAAGACAAGCAGCCACACATTCGATACGTAGAT CGTGTTGATGGTCCAATAACCCTCTCTTTCACCCATGAAATGAATTTCCC GATGTATCCAAAGAAGGCTAAGTAAGCTTTGTACTAATTCATCGAATCTC GTCAATGGATAAACATTCTGAAAAAGATTTTGTCTATTTTTTTTCGCTTT GAATTTATTATGAAAGAGTTTGAAAGGAAATAAAGCCTCCATGGGAATCC GATTCAGTGTAAGTTTGAGAATTACTCAAGCATTAAAAATGGCTTTAGCG GGAATCTTTTTTGAATTCCTCGACCTCGTTTTCATCTTCATCATAGTTCT GTAAGCAAATATAATCTTGCTCTTGTCTGGACCCTTCGAACCAGATCTCA TAATAGTCGATGTTGCTCAAATTCTTATGTTTAGTGTCATAAAACACTAC ATAGCAATGGTCGTCGTCGAATGTCTCATTGTTCGATTTCAAAGAGTTGC GCAGGATGTCGATATCATGATTTACGTTTTCCTCTCGGTATTGTTTATGA AAATATCCGGCGTATTGTATCCGCTTGTAATCCCTCCGAATGAAAATGTC TTTATGTTGTGGGCCGGGTGGATCCTCAGTGAAATATTTAGAGATGGGCA TTGACACTGTGAAGTCCTCCTTTTGCCTGTTCACCGAGATGCTCTTTCGC ATGGTCACCGGGCATGTCCTCGGAAGGCGGTAGTCCCGCTGGTTTTTACC TTTGAAATACTTTTCTAAGCGAGGTTTGGTAGATTTCCAACTATCTTGAA AGGAAGAACCATTCTCAATGGTTGAGACCCATACTGTTTGCGAATAGTGT CGTGTTGCGTAGATACGGTTGTAATCTAAAGCAGTGAATACTGGTCCGTC AAGATTCTTGTAAAATTTCGGTTTGTGGAAGACGTCTTTGTGCTTACTAT TGTCATGAACCTTGACTGTTTCGTCGGAGAAGAAACTGATAACGGCCCCC ATTTCGTCGATCGCTCTCCTCTTTATGAAATGAGTGAAGAGAGAAATTAT TGCACTTCTTTTGATTTATTTCATCTGTATGTTTTCCATCTGAAGTCTTC ACACTAATTCCCCTCTTTTTAGTGCTTTGCTCCTTTGGACTAAAATTGCA ATAAAAGATTGCGAAGAGAAAATGCTGATTGTTTGATCAGATAAAAGACC TCCTTCATCAGATCTTTTTGCCGTTCAAGTTATCATTTCTAGTGTGTGGT TTTTCTTCAGCTTTTCTGTGCTCTTTTCACATTTTTCTGTTGTTGTGAAA ATGGTTTTATTTTGATGAAGTAATAAGGAATAATTAATGAAAAGCATTTC TCTTTCCTGTGAAATGAACTGTGCGAAAGTCCTATTTTTATTTTGAAGAA CTTTAAAACTATCTGTTTTTTACTATTCGTTATCTAATAAACTTTTCAAC TTCGCAATGGGAAATTTCACCTGACTTCACTCCTCTCTCTTTTTCAAATC ATCATTCGATTAGCTAGAACACTATTCTAGTTTCACTTATCTAGTTTTCC AATTGTGATTATGACTGAAAACTGTCCCTCATAATTAACTTTTTTTCAAG CATGTGTGACACCTCTCTTTCGCAGATTGATTGATTATATCTACATACAT TTTAATACGCCATTGTTCTAGAAATGGATTACGTAGCTTTTGCATCACTA ACCATTTTTTTAAGTTGGCGACAGTTTTCTTTGCTTTCTTCTTCACATGC AATTCAATTCAACATTTGAACATGCACTCGTCAGAGTACTCATTCCTCTT TACTGTTTATGTCAGTTATGCAACAGTTTTAATTTGATAATAGATAAAAG AAAAGAAAAGAAACACAAAGAGGTGCGCAAGACTGGACATAAATTAAAAT TCTAAAGTATAGTGCTGGTAGTGCAGTGTAGCAATAATCGTCCTTCCAAA CAGGAGTCAAGGGTTCGATTCCAACTGCTGCATTTAACTTGACAAGTTCA TTATTTTTGGACCTACCTGGAGGTCCTATAAATGAACCTGTGTTCGTCTG TTACTAACTTCTCTCGGGATTAAATCATAGGAATTATTTGGTTTTTGATA CAAAGGTGCAAAATGGTGATTACCAAAATGTGTCGGAGCCCAACTTTCAA AAACAAAATTTTTTGGCCAATTTGGGCCCAAAAATGACCAAAAATAGGGT TTTTTGGACTTTGTTAAAAATCTGTTCATTAGTTTTTCCTGATTTTTGCC CCGCAGGGGCTTTTGTTGCTTCACGTAGCGGACCTGCTCGCCAGAAAAAT ATTCATGTTTTTTCCGATTTTTTTCGTGATATTTTTTTTAACTTTCGTGC ATTTTACACAGAGCATTTGTGAAAGCGAGAAATCGAAAGTCCCGTCTGCA CTGCCAGTCCACACAGCTATAAGCTTTCACAAACAACAAACAGCACACAA GATTTTTGCTTGGTTAATATCTTTTTAACGTAGTTGCTCAACTGGATTTA CTTGAGGGACATTGTTTGCTACTGAATGAATAACTATCAAACTACTGATA TTGGATCAAACCTTATACGATTGTAAGAATGGACGACGGACATCTTCATT CAATGACAGTGTTTTATTACACATACAGTGTTATGCGCTGCTCTACCGAA ACCCTACTGATATTATAAACACATAGACAAAAGGGAAATTGACCGTTAAT TCATATTATTTACCTATATAGTGACTTCATGTTGAAGGAAATTAAATTGA AATTTTTGGTGGAAATACGAAAATTTCTATCGAAATTCTAAATTCGAGTT AAAAAAACCCAGAGTACTACTACCCTCTAATTATAATGCAATGGATAATT GCATGCGCCGAAAGTAATTTTTCAAAGAGTAAGCCTTGTGCCAAAACGTG CCAAAAACTGGTACCAACATTGAGTTTCTTACAGAAGGTTTAGTGAGTGA GACATGCCAATGAGAAAATACTTTGACTAACATGAACTGATTCATTCTTG TGGACATTTGAAGCACAGTGTTACAGCAAAAAATGGTTGAGCATGGGAAG CAGCGAGCAGAAAAATGTAAACAGAAGCGGAACAAAAGCCGAAAAACAAT GGATTATGGAGTATTTGATGCTATTTTGTGAATAATTCTTTACTCCAATA TTGAAGCTTAAGTAAACTTTGAAAATGCTGTTTATGTCACTGTGCCAGAA CGGTACTTGGATATGTATGTACGCCGAAGATTTTCAGCCTCATATTGTGA AGAGACTCGGACACTCTCTCTACTAATACCACCATGGCACACTGTACCGT ATTGATGTTGAACACAGGAGCATACTTTGCTCAAATCAAAACTGAACAAA CCTTTTGACCTTTTAGAACCAGACGTCCAATAAAATACAAACACAATGTT GTACCTACCTGTGAAGTGAAAAGTTTTTAACCATGTTGAGGGTGGTTACA ACAGGACACGGTTTCTGAAGTTCCCCTGGCCTTTATTTTCAAAACATATG GATTGAAGACAAGATGAATCTGTTTTTATGAAACAAACAAACACACTTGG TGAAATATACCGTGAGATTGGGTAACTTGCATCAGTGGAGGCTAACATGC ATAGCCCTCAAATGAAAGACCTGGCTGGTTATTAAAATACAACTACGCAG CTCCGCTCGCAGCTCTACTCTGCCATTTTTGTTTTGATTTAATTTTGTAT TTTAATGACCAGCCAGGTCTTTCGTTTGAGGGCTATGCATGTTAGCCTCC ACTGATGAAAGTTACCCAATCTCACGGTACAAAGTCTGGCACTACTTTAA TTGGATCAGTTTATATTTCGTAGGAATTACCTTAAGAGTATGAATTTATG CGAGGACAAATTAATGCAGGATTAATTAATGCAGGATTATGTGTGCAGTG GTGGATTAGATGATGTTTTAATATTTTCATGGTGACTAACTTTCGCTGAA GGCCCCTTTTCAGATTTTCCTAGGATTTTATTTTATGGTCTTTCGTAAAT AAGAACAAAGGCTGTGAAATCTGGGAAATTTTTAATCCCTGAAAATTGAT TCAACTGCCAATTTTGAGAGCAACTATCAAATTCATGTCTTTAGTAACCA TGAAGAAATTTTATTCTAACTGAAAACTTTTGCAGAAACACGTATGAAGA TTGTTAAAGTTTTTCAGATAATTTTCAGTAACCTTTGATACAAATAAATT ATATCTACAGTATGCCACCAGTCCAAAGTTACTCACTTTTTAAATTTCAA ATCAAATGACTGAAATTGTATTCAATTTCCTTTTGGAATTCACCTTTAAT CTGCATTATGTACCTTAAGTGGATAAATTTTGGCGGGGATTAAATTTGGC GAATTTGGCGAATTTTGCCAAATTTCGCCAAATTAAATCCTCGCCAGAAT TTCCAAATTCGGCAATTCGCCAAATTAAACCCCCGCCAACTTTAACAAAA AGAGAATTATGTGAAAAATCACAACTTTTTAGTATATTTTTGAGTAATTT TCACCCATTTCAGTGTGACAAAATTTCCAATTCGCCAAATTAAATCCCCG CCAAATTTTACGAAATTGATCTATCGCCAAATTAAATCCCCGCCAAAAAT CGTGTTTTGGCAAATCGCCAAATTAAATCCACGCCAAAATTTATCCACTT AAGGTATTCTTTATGGAAGGGAAGGACAGTACACATTCTTATGTTTGGGT TTTCAAAAATGATTTTTATTTGGTGATTGAAGAAAATCAACTCTGATATC ATTCTTGTTCTTAACATGTTGCGAAACCTGTAATGGTTTTAATTTAGGTC ACTTTGCATCAGAAAGTGTAGATTAAACATGTTTTTTTTTGGATTGACAC TTTTGTTATGTATGGATCTTACTGAGAAAATTTTAACCACATCGGCTCGT GTTTCTTAAAACTTTAAACAGCTCTAGTAACATTGAGCACTTTTTATGAA GACTCATTTCACCAATTTATAGTCTGATTATGATTCCCTTGCTCTCTTCA TGGCTAAGTTCCTCTGGGCTAATATCTGCTATCGGCGGGGCATTCATAGC GACAGCTACTTGCTAGTTTATATAAAGACATTAAATTAAATTGTGGTGCT AAATATTTTTTGGCACCAACTTGCAAAATTTTAAATTATTCAGTTTTTCT TTCTACATTGCCTTCATTATGCCTTTTATTATTTGTTTTATAAACAGGTA GGTCCATAAAAGTATCGCTTGTCTTTTTCTACAGTAGGTCAAGCCATACC ATCTGAGGGCACCATAACTAGTTTTGGAAAGTTCATTTATTTGGGACCGA CTCTCCCTAACAGGGGTGGGCTCTTGGGTCTTTTTCCTGATATGGATGTT CTGTGGCAGTAAAGTTAAATTTAAGTTTTGAGTTACTGAAAGGCTCTTAC CCCTACTTTGCCCCTTCTTGCTTGCCTGCTAACTGTCAAGCAACTCTCTT TTTTTCAGAGAACCACCGAACATCGTTTTATGCAGTGTGTCAGGTTGTTG CAATCCAAAGAAATATTCCTGTTCGAAAACTAACTTTCCCGTCTGTAGTT TGCAGTGCTACAAGACCATCAATACTATCAAAATGGAAGAGGTAGTCACT TGA

Coding sequence (CDS) from alignment at sc0000263_pilon:107214..115716-

>XLOC_019812 ID=XLOC_019812|Name=XLOC_019812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000263_pilon:107214..115716- (Clytia hemisphaerica_ch_hm2_pilon)
GATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAAGAA
GCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACGTTG
ACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGACGAA
GGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCACCAC
AGAGATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAA
GAAGCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACG
TTGACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGAC
GAAGGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCAC
CACAGAGGTACCGTCAGACAATACCGGTGAACAAGGAGATGATCAAGATG
AAGATGAAGAATTGAACAAGAAAGAAGCCAAAAGGAAAGCTCGCAGGGTA
CCGTCAGACAATACCGGTGAACAAGGAGATGATCAAGATGAAGATGAAGA
ATTGAACAAGAAAGAAGCCAAAAGGAAAGCTCGCAGTGACAAATTAGAGG
AAGATCGTTGGCTGGAAGCTCTTGAGAAAGGCGAGCTGGATGATAGTGGT
GGCCTGAAGAAAGTGAAAAACAAATCACTCATGACTGCTAGACAGTGACA
AATTAGAGGAAGATCGTTGGCTGGAAGCTCTTGAGAAAGGCGAGCTGGAT
GATAGTGGTGGCCTGAAGAAAGTGAAAAACAAATCACTCATGACTGCTAG
ACAGAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTATCTGATGC
AACTACCAATGTAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTA
TCTGATGCAACTACCAATGTATCCTGAACGAACGGAAGAAGAGAATGAAG
AGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAACAAATG
CAACAGCAAATCGAAGAGACAAAAATCCTGAACGAACGGAAGAAGAGAAT
GAAGAGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAACA
AATGCAACAGCAAATCGAAGAGACAAAAACTCAAACAGTTGAGAAGCTGC
TTACGAAGACTCAAAAAGCAAGCAAGAAGGATAAAGAGATAAAAACTCAA
ACAGTTGAGAAGCTGCTTACGAAGACTCAAAAAGCAAGCAAGAAGGATAA
AGAGATAAAACAAACAAGTGGTGAAGACAAGCAGCCACACATTCGATACG
TAGATCGTGTTGATGGTCCAATAACCCTCTCTTTCACCCATGAAATGAAT
TTCCCGATGTATCCAAAGAAGGCTAACAAACAAGTGGTGAAGACAAGCAG
CCACACATTCGATACGTAGATCGTGTTGATGGTCCAATAACCCTCTCTTT
CACCCATGAAATGAATTTCCCGATGTATCCAAAGAAGGCTAAAGAACCAC
CGAACATCGTTTTATGCAGTGTGTCAGGTTGTTGCAATCCAAAGAAATAT
TCCTGTTCGAAAACTAACTTTCCCGTCTGTAGTTTGCAGTGCTACAAGAC
CATCAATACTATCAAAATGGAAGAGGTAGTCACTTGAAGAACCACCGAAC
ATCGTTTTATGCAGTGTGTCAGGTTGTTGCAATCCAAAGAAATATTCCTG
TTCGAAAACTAACTTTCCCGTCTGTAGTTTGCAGTGCTACAAGACCATCA
ATACTATCAAAATGGAAGAGGTAGTCACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_019812XLOC_019812-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000263_pilongenomesc0000263_pilon:107214..115716 -
Properties
Property NameValue
Aaloc748-891:145
Aaloc631-744:5599
Aaloc565-630:5779
Aaloc463-564:6177
Aaloc403-459:6542
Aaloc295-402:7528
Aaloc205-291:7731
Aaloc1-201:8504