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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:107214..115716- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019812 ID=XLOC_019812|Name=XLOC_019812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8503bp|location=Sequence derived from alignment at sc0000263_pilon:107214..115716- (Clytia hemisphaerica_ch_hm2_pilon) GATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAAGAA
GCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACGTTG
ACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGACGAA
GGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCACCAC
AGAGTATTTCTCATTTATTTCACTGCGGTCATCTTGAAGATTTGGCAGAG
TCTACATGAATTGTTATAATTTTCACTTTGAGAAGGAAAGACCATGGTTT
TTACCCCCCCCCTTGAAATAAGGTGGAAGTAAAAAAATGCCTTTTGACAA
AGGGGAGATTTTTGTCTTTTTTTTTTACAATAAGGGGGAGTTTTTATCAA
GGGCTGCAAGAATTTATCGAAACAAGAAAAAAGGGGGAAATAAAATTTGA
AATTTTTTGATTGAATTACCAATCTGTATCCTCTCTTCCCTTTTTCTTTA
TTGTAAAAATTTGTTTGTTGAAGGGGATTAAAAAACATCTTAAGGGGGGC
TGCTTTTTTTTAAGGGGGGACTGGGGGCATTCTGGTAATTTTTGTTCGAT
TTAAGGTGGAGTTTTCTTTAAGGGCAAAGTTGCATTTTAAGGGGGGAGGG
CTGAAAAAGTAGGCAGAAACCATGAAGACTACGCGAGTTCTTATTTCGCT
TTAAAGAGGGAAAGGCAACGTCCTCATGTTCGTATAATTTAATCGTATAA
AATGGGAAATTTCCTTTATTAGGGTACCGTCAGACAATACCGGTGAACAA
GGAGATGATCAAGATGAAGATGAAGAATTGAACAAGAAAGAAGCCAAAAG
GAAAGCTCGCAGGTTTCACTCATTTCTCATAACGCTTTTGTTTGGTCTGC
TCGTCAGACATTTTGTAGACCCCCCCCCCTCGCACGATGCGGAAGTGTAA
TTATTATTTTCTTGTTTTTGTACAGTGACAAATTAGAGGAAGATCGTTGG
CTGGAAGCTCTTGAGAAAGGCGAGCTGGATGATAGTGGTGGCCTGAAGAA
AGTGAAAAACAAATCACTCATGACTGCTAGACAGGTATTTTCTCTTAGTT
TAGCAAGTAGCTGAACAACTTAAAGAATAAAAAAAAGGGCCATAGTGTGC
AGAGGGGTCTGAACCCCCCCCCCAATTTTTATTTCATCCCCCAGTCATTC
AAAACCAAAAACATTGAAATTTGTATTAAAAATATAATTATCAATTGTTT
TTTAGTTGTCCTACACCAAATCAATATAAAATATGATAGATATTTTGACC
AAACGTTGTTTCCCCGCTATTTTTACTTGACCCCCCTAAAATCTCAAACC
CCCAATTTTATTCGAAAGATTTCTTATCCTCCCTATAAAGCACTTCTGGA
AAAGTTGGATCCCTTCCTTAAAAAGGAGGGCAGGGGGTCACACTATTTTT
ATTAAAGCAAACTATATAAGAATATAAGGCTTCGATGGCCAAAATGTTAA
GAACAAGTTAAGAACATTTTAAGGTTTTGTGGTCAAAAATACTCACAGAA
TGGTCAAAATAAGAACATGTTAAGAACATTTTAGGCTTAAAACTCAAAAA
GTTAAGAATATCCTAAGGCTTCAAAATTTTTGGATGTTCTTCTAAAACAA
TGTGTATCTAGAATGAATATCCACTAAATATGTGAGGTTTTTTCAGAAAT
GGAAAAATGATGATGAAATAGAGGTCCATAAAAGTAAAAAAACTAATGAT
AAAAGTAGCTATAAAAAGAAGAAAGCAACTCAAAAAAGTCAAGATGGAAA
AAAGCAGCAGCAATATGAGTCAATAGGTAATTTCAAAAAACACATAATAT
GCCCCTAAGTTATCAACCTACACAGGATTTTTGCTATTCCCAAAATTTAT
ATATCGTCTTGTTTGTTGTGTCTTTAAAGTTAAACAAAATAAAAATACTT
CACTTGTTCTAGAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTA
TCTGATGCAACTACCAATGTGTAAGTGAAGAACAAAAAGCATATTATCAT
TTCTGAAAAAAATAGTAGCGCTTCTTTTTAATAATTCATATGACTTGTGA
AAGTGGCTGCCTAGAGACAAATCAGGACAAGAGACTTCTCTAACTCGTCA
ATCAGACGAACCACTAGAGGAAATTCTTTGACGATTTCTTTGCACCGTAA
CCAGTCGAGCACGACTAACGTCATACAACTTTTAATGGTTGCATTTCCTC
GAGTGTTCAAATAAGGGACAGTTTGTGCTTTTACAACTGCATAAAATGAG
AGACATCAATTACTTTCTTCTTCAGATCCTGAACGAACGGAAGAAGAGAA
TGAAGAGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAAC
AAATGCAACAGCAAATCGAAGAGACAAAAGTAAGCCATTTTTCCTACGTC
ATTCGTCGATCTCTGGAATCAGTCTTACTTCTACTTTAAAAGGCAACCCT
TCTACCTCGTTTTAGGAAGTGAAGGCGCCAGTTTCCATTCTTTACTTGAA
AAAGGTCGAGAGAAGTCATTGTATTGACGTGTTCTACAGTCGAATTTCCA
ACTTTCTTCGAACACGCGATCAAGAAGGGCGGAAAGCTGGTCGTCCAAAT
CAAGTCTTAAATCAGGCCTGTTTAGTGATTTTTATTGATCAATTTTAACA
AAACCTTTCCTTTATTTTCTTTTAGACTCAAACAGTTGAGAAGCTGCTTA
CGAAGACTCAAAAAGCAAGCAAGAAGGATAAAGAGATAAAAGTAATTTAA
CGTAATTTTCTTGTGTTTGGGAAATGGATTGAAATCCCTTAACAAACATT
TTTGATGAACAAGCATAAAAATACTGTGTAACTATATATTGTTTTCTCTC
TCCAGCAAACAAGTGGTGAAGACAAGCAGCCACACATTCGATACGTAGAT
CGTGTTGATGGTCCAATAACCCTCTCTTTCACCCATGAAATGAATTTCCC
GATGTATCCAAAGAAGGCTAAGTAAGCTTTGTACTAATTCATCGAATCTC
GTCAATGGATAAACATTCTGAAAAAGATTTTGTCTATTTTTTTTCGCTTT
GAATTTATTATGAAAGAGTTTGAAAGGAAATAAAGCCTCCATGGGAATCC
GATTCAGTGTAAGTTTGAGAATTACTCAAGCATTAAAAATGGCTTTAGCG
GGAATCTTTTTTGAATTCCTCGACCTCGTTTTCATCTTCATCATAGTTCT
GTAAGCAAATATAATCTTGCTCTTGTCTGGACCCTTCGAACCAGATCTCA
TAATAGTCGATGTTGCTCAAATTCTTATGTTTAGTGTCATAAAACACTAC
ATAGCAATGGTCGTCGTCGAATGTCTCATTGTTCGATTTCAAAGAGTTGC
GCAGGATGTCGATATCATGATTTACGTTTTCCTCTCGGTATTGTTTATGA
AAATATCCGGCGTATTGTATCCGCTTGTAATCCCTCCGAATGAAAATGTC
TTTATGTTGTGGGCCGGGTGGATCCTCAGTGAAATATTTAGAGATGGGCA
TTGACACTGTGAAGTCCTCCTTTTGCCTGTTCACCGAGATGCTCTTTCGC
ATGGTCACCGGGCATGTCCTCGGAAGGCGGTAGTCCCGCTGGTTTTTACC
TTTGAAATACTTTTCTAAGCGAGGTTTGGTAGATTTCCAACTATCTTGAA
AGGAAGAACCATTCTCAATGGTTGAGACCCATACTGTTTGCGAATAGTGT
CGTGTTGCGTAGATACGGTTGTAATCTAAAGCAGTGAATACTGGTCCGTC
AAGATTCTTGTAAAATTTCGGTTTGTGGAAGACGTCTTTGTGCTTACTAT
TGTCATGAACCTTGACTGTTTCGTCGGAGAAGAAACTGATAACGGCCCCC
ATTTCGTCGATCGCTCTCCTCTTTATGAAATGAGTGAAGAGAGAAATTAT
TGCACTTCTTTTGATTTATTTCATCTGTATGTTTTCCATCTGAAGTCTTC
ACACTAATTCCCCTCTTTTTAGTGCTTTGCTCCTTTGGACTAAAATTGCA
ATAAAAGATTGCGAAGAGAAAATGCTGATTGTTTGATCAGATAAAAGACC
TCCTTCATCAGATCTTTTTGCCGTTCAAGTTATCATTTCTAGTGTGTGGT
TTTTCTTCAGCTTTTCTGTGCTCTTTTCACATTTTTCTGTTGTTGTGAAA
ATGGTTTTATTTTGATGAAGTAATAAGGAATAATTAATGAAAAGCATTTC
TCTTTCCTGTGAAATGAACTGTGCGAAAGTCCTATTTTTATTTTGAAGAA
CTTTAAAACTATCTGTTTTTTACTATTCGTTATCTAATAAACTTTTCAAC
TTCGCAATGGGAAATTTCACCTGACTTCACTCCTCTCTCTTTTTCAAATC
ATCATTCGATTAGCTAGAACACTATTCTAGTTTCACTTATCTAGTTTTCC
AATTGTGATTATGACTGAAAACTGTCCCTCATAATTAACTTTTTTTCAAG
CATGTGTGACACCTCTCTTTCGCAGATTGATTGATTATATCTACATACAT
TTTAATACGCCATTGTTCTAGAAATGGATTACGTAGCTTTTGCATCACTA
ACCATTTTTTTAAGTTGGCGACAGTTTTCTTTGCTTTCTTCTTCACATGC
AATTCAATTCAACATTTGAACATGCACTCGTCAGAGTACTCATTCCTCTT
TACTGTTTATGTCAGTTATGCAACAGTTTTAATTTGATAATAGATAAAAG
AAAAGAAAAGAAACACAAAGAGGTGCGCAAGACTGGACATAAATTAAAAT
TCTAAAGTATAGTGCTGGTAGTGCAGTGTAGCAATAATCGTCCTTCCAAA
CAGGAGTCAAGGGTTCGATTCCAACTGCTGCATTTAACTTGACAAGTTCA
TTATTTTTGGACCTACCTGGAGGTCCTATAAATGAACCTGTGTTCGTCTG
TTACTAACTTCTCTCGGGATTAAATCATAGGAATTATTTGGTTTTTGATA
CAAAGGTGCAAAATGGTGATTACCAAAATGTGTCGGAGCCCAACTTTCAA
AAACAAAATTTTTTGGCCAATTTGGGCCCAAAAATGACCAAAAATAGGGT
TTTTTGGACTTTGTTAAAAATCTGTTCATTAGTTTTTCCTGATTTTTGCC
CCGCAGGGGCTTTTGTTGCTTCACGTAGCGGACCTGCTCGCCAGAAAAAT
ATTCATGTTTTTTCCGATTTTTTTCGTGATATTTTTTTTAACTTTCGTGC
ATTTTACACAGAGCATTTGTGAAAGCGAGAAATCGAAAGTCCCGTCTGCA
CTGCCAGTCCACACAGCTATAAGCTTTCACAAACAACAAACAGCACACAA
GATTTTTGCTTGGTTAATATCTTTTTAACGTAGTTGCTCAACTGGATTTA
CTTGAGGGACATTGTTTGCTACTGAATGAATAACTATCAAACTACTGATA
TTGGATCAAACCTTATACGATTGTAAGAATGGACGACGGACATCTTCATT
CAATGACAGTGTTTTATTACACATACAGTGTTATGCGCTGCTCTACCGAA
ACCCTACTGATATTATAAACACATAGACAAAAGGGAAATTGACCGTTAAT
TCATATTATTTACCTATATAGTGACTTCATGTTGAAGGAAATTAAATTGA
AATTTTTGGTGGAAATACGAAAATTTCTATCGAAATTCTAAATTCGAGTT
AAAAAAACCCAGAGTACTACTACCCTCTAATTATAATGCAATGGATAATT
GCATGCGCCGAAAGTAATTTTTCAAAGAGTAAGCCTTGTGCCAAAACGTG
CCAAAAACTGGTACCAACATTGAGTTTCTTACAGAAGGTTTAGTGAGTGA
GACATGCCAATGAGAAAATACTTTGACTAACATGAACTGATTCATTCTTG
TGGACATTTGAAGCACAGTGTTACAGCAAAAAATGGTTGAGCATGGGAAG
CAGCGAGCAGAAAAATGTAAACAGAAGCGGAACAAAAGCCGAAAAACAAT
GGATTATGGAGTATTTGATGCTATTTTGTGAATAATTCTTTACTCCAATA
TTGAAGCTTAAGTAAACTTTGAAAATGCTGTTTATGTCACTGTGCCAGAA
CGGTACTTGGATATGTATGTACGCCGAAGATTTTCAGCCTCATATTGTGA
AGAGACTCGGACACTCTCTCTACTAATACCACCATGGCACACTGTACCGT
ATTGATGTTGAACACAGGAGCATACTTTGCTCAAATCAAAACTGAACAAA
CCTTTTGACCTTTTAGAACCAGACGTCCAATAAAATACAAACACAATGTT
GTACCTACCTGTGAAGTGAAAAGTTTTTAACCATGTTGAGGGTGGTTACA
ACAGGACACGGTTTCTGAAGTTCCCCTGGCCTTTATTTTCAAAACATATG
GATTGAAGACAAGATGAATCTGTTTTTATGAAACAAACAAACACACTTGG
TGAAATATACCGTGAGATTGGGTAACTTGCATCAGTGGAGGCTAACATGC
ATAGCCCTCAAATGAAAGACCTGGCTGGTTATTAAAATACAACTACGCAG
CTCCGCTCGCAGCTCTACTCTGCCATTTTTGTTTTGATTTAATTTTGTAT
TTTAATGACCAGCCAGGTCTTTCGTTTGAGGGCTATGCATGTTAGCCTCC
ACTGATGAAAGTTACCCAATCTCACGGTACAAAGTCTGGCACTACTTTAA
TTGGATCAGTTTATATTTCGTAGGAATTACCTTAAGAGTATGAATTTATG
CGAGGACAAATTAATGCAGGATTAATTAATGCAGGATTATGTGTGCAGTG
GTGGATTAGATGATGTTTTAATATTTTCATGGTGACTAACTTTCGCTGAA
GGCCCCTTTTCAGATTTTCCTAGGATTTTATTTTATGGTCTTTCGTAAAT
AAGAACAAAGGCTGTGAAATCTGGGAAATTTTTAATCCCTGAAAATTGAT
TCAACTGCCAATTTTGAGAGCAACTATCAAATTCATGTCTTTAGTAACCA
TGAAGAAATTTTATTCTAACTGAAAACTTTTGCAGAAACACGTATGAAGA
TTGTTAAAGTTTTTCAGATAATTTTCAGTAACCTTTGATACAAATAAATT
ATATCTACAGTATGCCACCAGTCCAAAGTTACTCACTTTTTAAATTTCAA
ATCAAATGACTGAAATTGTATTCAATTTCCTTTTGGAATTCACCTTTAAT
CTGCATTATGTACCTTAAGTGGATAAATTTTGGCGGGGATTAAATTTGGC
GAATTTGGCGAATTTTGCCAAATTTCGCCAAATTAAATCCTCGCCAGAAT
TTCCAAATTCGGCAATTCGCCAAATTAAACCCCCGCCAACTTTAACAAAA
AGAGAATTATGTGAAAAATCACAACTTTTTAGTATATTTTTGAGTAATTT
TCACCCATTTCAGTGTGACAAAATTTCCAATTCGCCAAATTAAATCCCCG
CCAAATTTTACGAAATTGATCTATCGCCAAATTAAATCCCCGCCAAAAAT
CGTGTTTTGGCAAATCGCCAAATTAAATCCACGCCAAAATTTATCCACTT
AAGGTATTCTTTATGGAAGGGAAGGACAGTACACATTCTTATGTTTGGGT
TTTCAAAAATGATTTTTATTTGGTGATTGAAGAAAATCAACTCTGATATC
ATTCTTGTTCTTAACATGTTGCGAAACCTGTAATGGTTTTAATTTAGGTC
ACTTTGCATCAGAAAGTGTAGATTAAACATGTTTTTTTTTGGATTGACAC
TTTTGTTATGTATGGATCTTACTGAGAAAATTTTAACCACATCGGCTCGT
GTTTCTTAAAACTTTAAACAGCTCTAGTAACATTGAGCACTTTTTATGAA
GACTCATTTCACCAATTTATAGTCTGATTATGATTCCCTTGCTCTCTTCA
TGGCTAAGTTCCTCTGGGCTAATATCTGCTATCGGCGGGGCATTCATAGC
GACAGCTACTTGCTAGTTTATATAAAGACATTAAATTAAATTGTGGTGCT
AAATATTTTTTGGCACCAACTTGCAAAATTTTAAATTATTCAGTTTTTCT
TTCTACATTGCCTTCATTATGCCTTTTATTATTTGTTTTATAAACAGGTA
GGTCCATAAAAGTATCGCTTGTCTTTTTCTACAGTAGGTCAAGCCATACC
ATCTGAGGGCACCATAACTAGTTTTGGAAAGTTCATTTATTTGGGACCGA
CTCTCCCTAACAGGGGTGGGCTCTTGGGTCTTTTTCCTGATATGGATGTT
CTGTGGCAGTAAAGTTAAATTTAAGTTTTGAGTTACTGAAAGGCTCTTAC
CCCTACTTTGCCCCTTCTTGCTTGCCTGCTAACTGTCAAGCAACTCTCTT
TTTTTCAGAGAACCACCGAACATCGTTTTATGCAGTGTGTCAGGTTGTTG
CAATCCAAAGAAATATTCCTGTTCGAAAACTAACTTTCCCGTCTGTAGTT
TGCAGTGCTACAAGACCATCAATACTATCAAAATGGAAGAGGTAGTCACT
TGA Coding sequence (CDS) from alignment at sc0000263_pilon:107214..115716- >XLOC_019812 ID=XLOC_019812|Name=XLOC_019812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000263_pilon:107214..115716- (Clytia hemisphaerica_ch_hm2_pilon) GATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAAGAA GCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACGTTG ACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGACGAA GGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCACCAC AGAGATTCTACCAGCAAGAAGAAGTCAAAGAAACATAAGAAGCATAAAAA GAAGCATTCACGAAGCACGCTTTCTGACGCCGAAGAAATTGACGTTGACG TTGACGTAGATGTCGTTAATAATGATGAGATGTCCTGCTCTTCACAAGAC GAAGGGAAAATAAAACTAAAGATCAAATTTGGTGGACGAACCATATCCAC CACAGAGGTACCGTCAGACAATACCGGTGAACAAGGAGATGATCAAGATG AAGATGAAGAATTGAACAAGAAAGAAGCCAAAAGGAAAGCTCGCAGGGTA CCGTCAGACAATACCGGTGAACAAGGAGATGATCAAGATGAAGATGAAGA ATTGAACAAGAAAGAAGCCAAAAGGAAAGCTCGCAGTGACAAATTAGAGG AAGATCGTTGGCTGGAAGCTCTTGAGAAAGGCGAGCTGGATGATAGTGGT GGCCTGAAGAAAGTGAAAAACAAATCACTCATGACTGCTAGACAGTGACA AATTAGAGGAAGATCGTTGGCTGGAAGCTCTTGAGAAAGGCGAGCTGGAT GATAGTGGTGGCCTGAAGAAAGTGAAAAACAAATCACTCATGACTGCTAG ACAGAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTATCTGATGC AACTACCAATGTAAAGCGCTGCACGGGGACGCAAAGGAGACAGGGAATTA TCTGATGCAACTACCAATGTATCCTGAACGAACGGAAGAAGAGAATGAAG AGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAACAAATG CAACAGCAAATCGAAGAGACAAAAATCCTGAACGAACGGAAGAAGAGAAT GAAGAGTTTGAAAGGAAAAGGAAATTGCGCGCTAAGAAAAGAAAACAACA AATGCAACAGCAAATCGAAGAGACAAAAACTCAAACAGTTGAGAAGCTGC TTACGAAGACTCAAAAAGCAAGCAAGAAGGATAAAGAGATAAAAACTCAA ACAGTTGAGAAGCTGCTTACGAAGACTCAAAAAGCAAGCAAGAAGGATAA AGAGATAAAACAAACAAGTGGTGAAGACAAGCAGCCACACATTCGATACG TAGATCGTGTTGATGGTCCAATAACCCTCTCTTTCACCCATGAAATGAAT TTCCCGATGTATCCAAAGAAGGCTAACAAACAAGTGGTGAAGACAAGCAG CCACACATTCGATACGTAGATCGTGTTGATGGTCCAATAACCCTCTCTTT CACCCATGAAATGAATTTCCCGATGTATCCAAAGAAGGCTAAAGAACCAC CGAACATCGTTTTATGCAGTGTGTCAGGTTGTTGCAATCCAAAGAAATAT TCCTGTTCGAAAACTAACTTTCCCGTCTGTAGTTTGCAGTGCTACAAGAC CATCAATACTATCAAAATGGAAGAGGTAGTCACTTGAAGAACCACCGAAC ATCGTTTTATGCAGTGTGTCAGGTTGTTGCAATCCAAAGAAATATTCCTG TTCGAAAACTAACTTTCCCGTCTGTAGTTTGCAGTGCTACAAGACCATCA ATACTATCAAAATGGAAGAGGTAGTCACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000263_pilon | genome | sc0000263_pilon:107214..115716 - |
Properties
| Property Name | Value |
| Aaloc | 748-891:145 |
| Aaloc | 631-744:5599 |
| Aaloc | 565-630:5779 |
| Aaloc | 463-564:6177 |
| Aaloc | 403-459:6542 |
| Aaloc | 295-402:7528 |
| Aaloc | 205-291:7731 |
| Aaloc | 1-201:8504 |
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