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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:105452..111849+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019303 ID=XLOC_019303|Name=XLOC_019303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6398bp|location=Sequence derived from alignment at sc0000067_pilon:105452..111849+ (Clytia hemisphaerica_ch_hm2_pilon)
GATACTGATGAACCAAGTGGACAGTTTTTGTTGGCAGAGGTATTTAAATA
TGCTAAGCGGTACCTTTTCAGTACACTTTTATATGGATGGATAAATCTTT
TGACAGACTACAAAGCAGCTGACTATCTATGGACAAAGTATATAAAATTC
TGGAGGGAATTGAACTGTTAGAACCTGGTATACAATATATTAACCTTTGA
TTGTCATGTCTAAAGATACTATtgattttttactactttatcgACAATAA
GCCAAACCTTATTGCTTCATTTCTAGGGCTCTGGGTTATCAAACGATGGT
GCTGCCATACTTCCACAAggtatttttcttcattttaaatACTATTACCA
ATAAGCCAGTAcccttttgactttttttatgacCGCCTTATTTTAGATTT
TCCCCCATTCTTCTCTGAGCCCCCCTACAGTTGAGTTATATGGAAACAGG
CACGAAAGAGTAAGCTGTGTTACTTTAGCTTTCTACTTAGAGGTAGGATA
GGAACCCCTTCCTTTTCAATCGTCATGGAGTGAACTTTGTGACTTTGCAG
ATACGCCATTTCGGAGTTCACGACGCCATTTTGTAAGCGGAGCAAATCTA
ATGGCGGGGGTGCAGTCGGCCTCAACTAGAGAATCATTTCAGAGAGCCGT
AAGCTACGATCTCGGACTATTATCGAGTTGTACCCGACTGAGACGGAGCA
AAACAAGCCCCCTAGGGTGATTCCTCCAGCACTCCCTCGTCGTGTCTaca
caaaaagtaaacaaacctttaaaaattcgATTGAAACTTATCCTCAAACg
gtcaaaatataattttctactTAGAACAAAATCTATCATGGATGTCACTA
CACAAAACctaaatatttctcttttttagctTATCAAGAGTCCTCCATTC
TTCATCGTATCTGATTGTTCACATCTaaaaaaaCAATGCTGTGACTGGGG
TCTTTCTATGTATATAATCATATCAAAGAAAACAGGAATCAAACAAAAGG
AGTCTCCTCTAAAGAATTGTTCCGATTCCCTTTTTCTAGGTATTTTCCAT
TGGAAATTCCCATGCCTCAAAGCAATGATAAATAATATCAGAACATATTT
TTGCTAATTATACATcactttgttattgttttgtacAGAGTTTTATATAT
TCAACATGAATTTGTGATTAACAAAACAAAGTCTGCTAAAAACTGCTTTT
AgctcaataaaaaaatataaaaaataagatctattaTTTAGGAGAACAat
ggtgtaaaaaatttgatgatatATTAGAAATTCAACTAAAAGGAAGAATA
AGTTTGGGTATGCTATTCATAAGtaaatttttgtaagaaaaaaccacGAT
CGTTTGTTTTATAAAGTCTTAAAGCAGCTGTGGTGAGAGCCAATTTATCC
GTACATAATCCATAATTTTTTACCGTTGACTGTctataaaatatgttttt
ttcaaCGGATAGCCCATTCACAAAGTCTTGATGATTATACACAACACAGT
CTAAGATTTAGTTTATACTATTCAAAAATTGCCTTTGTAACAGCATCGTA
TCGTGTCATGAACCCATCGGTTGATCTTTGATGAACAGGTTCAAAATCAG
AAGTTTTCCAACAAAAGCGTGTGCTATAAAATTTGTCTGTATTGCCACTT
GTAGCataattctatcaaaagaaTAGTACCGTGaacggccataacttgca
aCACGGACTTAACTTGCAACAGTATTCAAATTTCCTTTGAGAGTAATTTG
TCTGCCATTAAAACACTTCCTCTTTTGTTACTATACAAACCAGATAACAT
CAACCATCAACAAGGCCAAATAGATAACAACTAGTTTTCTCTCTACCATG
TTTGCTAATTCTGCtaaattcattcattttgtcatttgtttttctctaaa
ataaatAATAGGAAAATGTGAAACCATCCTGATACTGTCCATACATTGtc
aagtgaaccgctgcaatTTGGGATTGAACCTCAGTCGCCTCTGTACAGCA
ACCAAGAAAAATGACCACTATCCCACAGCGCCTTAGTGTATATCTACTAG
TGTATATCCCAATAGAGCAAAAGGTATAAAAAATATATCCGAGAGGAGCA
TAAAGCTAGCCTAGCTAGCAAGGTTGCTACCAAAACCATCAACAAGAAGC
TTCTAAAAATCAGAGCAAGCAAAGgttacacacacacagacagagaGAAG
GTTATTACCTGCCTAACTAATCCAGTACATAATACTGTAAAAAGACAATG
ATAAAGCAGTAATCAAACACTTTTATGGTAATTTAGTGATTTAGTGAGCA
AATACAAAAAGACAGCCTTCTCTTTCCATTTTCCATCCACCAAGAAATGA
GAAACTGCAGAATAGTTTTTAGAAAGGGGAttctgttttgtttacaaagG
AATCTCCGCCGGTCTCTGCCCTTCCACGGCCATTTTTTGCTCCGCCTGCA
AAATGGCGTCGCGAACTCCGAAATGGCGTATTATGAACAAGTGCTCTACG
GTAAAGCTATTGTCACCATGGTCACCCAACTTTGcctctattttatttta
ttctgttttttattcacttgggtatgaacttttttggcatttaactttCT
ATATAACTCGCTCCGTTTATTTCTTTCTAGTCAACGATGAAGGAAGACAG
TTTGTCAAAGATCTAGTAGTAAATGTTATTTAGTTATCTTAATAAAGGCT
TAGTGTTCTGTTCTGagaaaagaaaggtttttttaaatgtcatttAAAGT
TATAAGATATATCGTAATCTCAGCAGCTTAGATCagaataaatctttttc
aatagccCAGTTTACAATATGCACATAATAGTTAATCTTTAGTAGTTTAA
TTGATAAATGTTTATAtaagatttcaaatttctttgttttacaGGGAGAC
GATGGCTACGAAgcagatgatgaaaatgataatgGAAAACGTTTACCCCA
TAATTTAATCGACGATCCAATGTAAATTAATTTCTCAGTGACATAAAAAT
CTTCTAGATAGCACAGTGATGTAGCTACCGGGGGAGGTATTAGGGAGTAT
TTTTCTcctaaaattgaatattttcctcttaattttgaatttatatgAAT
GAATTTAGTTTTTAAAGTGCCTTTTCAGCCATTCTAGAGCTCTTGATTCC
AAAATTTACTTGTCTGGGTAAAACTTTTCGCATGATAATGGGGTTGATAA
ATTTCAGGGTCTTCTAATCCATTCTGTTCTTTTATTTCTTCAgatattta
tcaaattttcagatGAAGGCACAAATCAAAGATTATAACGAGACAATGGA
AAAGAAAGTTAAGGCACCTAATGCATCCAGGTAAAAATATTAGCATTACT
TATTGGGAACTGAAATAGAGctcattttctcctttttaatgcaaaattac
TCGAGCCAGTTTTGGAAAACAATATGAATGTTTTCGAGATAAAGGGAAAA
ACAGTGTCAGAAGTGCCCAATCATAATTTTcgttgtctttttctttttca
agttttcacaAGAAGTTCTGATCTTCTCTCTGTTTATCCggttgaaacaa
aaaatatatttgatccCCTCTCTCGCCCTGATCACAGTATTAGAGAGAAA
TACCAGACGAACAGATCTGTTATATATCACTTTAATCGTACTAAAATGCC
AAGGAAGAATGCATCTATAGAAAGAACAAAAATAGCCTTttggtcatgca
gttattatgtGAACACTATGACACTTACTACATGGTGGTGTAACAATTGA
AAAACTGAAAGACAGTTACTCCAAGGTGGAGTAAGTGCAGAAATGGGTGG
TCCTTCTTTAAAATATGGGGACTttagttattattttttgtacTAACTGC
AGCTGACTGCAgctaaaatttaaagattttgcaaATTGTTTCTGGAATAT
AACATCaattattcaataaaaacagataaataCATTAATTTTTATCCAGT
TTATTAACCTCCATCTGTCTTAGGGTAAAAGATCATAAAGAActttgttt
gatttggtctgatttggccattgttttttttttgttttttttttgttttt
ttaaattgcaAATACAATTCATTCATCCAACGCAAACCTGCTCATTCTGA
TAGAAACCCATGTTCGAATCATAGTGTATTGTACCGGTTGTGCAGCCCCA
ATTTGGACATACAATGCCAAGGATCACTACTTAGGTGTACACCCTAACCA
CAAACTCAACGATTACGTCACAACTAAAGAGAGGGAGGCAATGGAATCTA
TCTCaaaaaaaGGACCAAAACAATAACTAAATTGACATTTGATCTAGATC
TTTGAAACTCATATTTGTCATTGCCcgtttataaacatttttaaactaTA
GATGTAGTATAGTATTTGTTTTTCTAGAGAGTAATATAgtaatgttttca
attttattttaaccttactatggtattttttgtttatttgtccagtttta
gttcatttaAGTACAACTAGGTATAACAGTTTTATTTCGAAGcagaatat
tttgaaagataatTTGAAAGTCTTTTAAAGTATAAACTAAAGGAATATTA
TTGACTTTGAATCtcttaaaactgcttaaaaagtaTTCCTAGGAGTGGGG
AATGTCGTATCTAGTATATTTTCTTGATATGTAAGTTTAGTAAATGCTGT
AGGACAATTTTAGGGGGTGGTATGTGCATTTTGGAGAGCGAAAACACTTA
CTCCAaagtggagtaactgcaagggtggtggtgttggcaaaaaaattcga
aaaattccaGTTACTCATCAAAGTGTCATGGAGTAACTgcgtgacccccc
ccccctcctcccTGTATGGAAGCTATTTTCTTGTAAATCATAATCAAGCT
CTCGAGAAAGTGCTCCTTTTCCCAGTCATCtttttttCccgttttatttg
atttataaTTCACTACTTCAATTACCTTTTTAGAGAAAACATTGTCACCG
TGGAAGATTTCTTCTCGCTTGATTTTCCTGGGTAGGTTAGAAGTTGAATT
TCATAATTTACagctaagtaagtaagtctgcgaccgcagtcggaggcgac
ccgaaggctcctctttcgatagctgtctacccgaaggtaggggagggcgc
cactctttctccctggattgctccacttacccttgatccttctcttaatt
gctgagcatctagcagagaggcatcaagtaccattttgggaatctttggt
atgacccggctgggggttgaacccacaaccttgcgcaccgtagccggatg
ctctaccactgcactacggtcgctacaTGAATGTAATATAAATGTTAAAC
TGAAAGCAAGAGATAATTGGTTGGTCTTATTAATTTCTGatgtacactct
ttttttttataagcatacgggaaaatcaggtcgaggctcaatatgcttag
caaaatctcatttcagccttaatttatgcttaatTATATGCTTGGACttg
aacttgattttctttgactcaatgaaaatttcgaatttttaaacCTGGAT
AATGATTCTGCTCAAAGAATGAAATTTGTaatttggcgccgcaggcaaaa
atctTTGGTCTATGAATgctcaaacagctttaaaagtaacccgaaaaagg
tcaatattttagaaaagctgcaagatttttttgatttcagctttgaggta
tgcttagcattatgcttatttttcggcaaatttgagccaaattatgctta
taaacgttatgcttaaaaaaaaaGGAGTGTAGCTACGTTCTGCGACACTC
ATGAAAATACTAAtgtcattattttcttcttttaagcaTAACTCAAAGAA
AATGGACCATCTTCCACGAGTGTGTAACTATTTCAGATACTTTCAGCATA
ACttttttacgaaaaatcatctatctgtctatccatccatccatccatcc
atttttctctttttttcttaaaattcataGAAGATTTGATTATGCttcat
gaatttatttttattataggcGATGCAAGAAGAGCCAATTGAAGGAACCT
GAACGAGAACTTGAAAAGGAAGAAAGACTCAGACAATATCATACTCTATA
TTAGTATGTAACTATTTCAGATACTTCCAGCATAACTTTTTTACGAAAAA
TCAATGACATTTAATTTCTACATACCCCCCTACctatccatccatccatc
catctttctcttttttcaaaattcatagaaGATTTGATTATGCttcatga
atttatttttattaaagcCAATGCaagaagagcagattgaaggaacccga
aggagaaccagaaagagaagaagaacctgaaagaaaagaagaacctgaaa
gaaaagaagaacctgaaagaaaagaagaacctgaaagaaaagaagaacct
gaaagagaagtagaacctgaaagaaaaactaaagccaaagGCATAAGG Coding sequence (CDS) from alignment at sc0000067_pilon:105452..111849+ >XLOC_019303 ID=XLOC_019303|Name=XLOC_019303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000067_pilon:105452..111849+ (Clytia hemisphaerica_ch_hm2_pilon)
GATACTGATGAACCAAGTGGACAGTTTTTGTTGGCAGAGGATACTGATGA
ACCAAGTGGACAGTTTTTGTTGGCAGAGGGCTCTGGGTTATCAAACGATG
GTGCTGCCATACTTCCACAAgGGCTCTGGGTTATCAAACGATGGTGCTGC
CATACTTCCACAAgTCAACGATGAAGGAAGACAGTTTGTCAAAGATCTAG
TATCAACGATGAAGGAAGACAGTTTGTCAAAGATCTAGTAGGAGACGATG
GCTACGAAgcagatgatgaaaatgataatgGAAAACGTTTACCCCATAAT
TTAATCGACGATCCAATGGAGACGATGGCTACGAAgcagatgatgaaaat
gataatgGAAAACGTTTACCCCATAATTTAATCGACGATCCAATatattt
atcaaattttcagatGAAGGCACAAATCAAAGATTATAACGAGACAATGG
AAAAGAAAGTTAAGGCACCTAATGCATCCAGatatttatcaaattttcag
atGAAGGCACAAATCAAAGATTATAACGAGACAATGGAAAAGAAAGTTAA
GGCACCTAATGCATCCAGAGAAAACATTGTCACCGTGGAAGATTTCTTCT
CGCTTGATTTTCCTGGAGAAAACATTGTCACCGTGGAAGATTTCTTCTCG
CTTGATTTTCCTGGcaTAACTCAAAGAAAATGGACCATCTTCCACGAcaT
AACTCAAAGAAAATGGACCATCTTCCACGAgcGATGCAAGAAGAGCCAAT
TGAAGGAACCTGAACGAGAACTTGAAAAGGAAGAAAGACTCAGACAATAT
CATACTCTATATTAgcGATGCAAGAAGAGCCAATTGAAGGAACCTGAACG
AGAACTTGAAAAGGAAGAAAGACTCAGACAATATCATACTCTATATTAcC
AATGCaagaagagcagattgaaggaacccgaaggagaaccagaaagagaa
gaagaacctgaaagaaaagaagaacctgaaagaaaagaagaacctgaaag
aaaagaagaacctgaaagaaaagaagaacctgaaagagaagtagaacctg
aaagaaaaactaaagccaaagGCATAAGGcCAATGCaagaagagcagatt
gaaggaacccgaaggagaaccagaaagagaagaagaacctgaaagaaaag
aagaacctgaaagaaaagaagaacctgaaagaaaagaagaacctgaaaga
aaagaagaacctgaaagagaagtagaacctgaaagaaaaactaaagccaa
agGCATAAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:105452..111849 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 460-639:6219 |
| Aaloc | 376-456:5971 |
| Aaloc | 343-372:5788 |
| Aaloc | 295-339:4935 |
| Aaloc | 208-291:3245 |
| Aaloc | 130-204:2895 |
| Aaloc | 94-129:2633 |
| Aaloc | 49-90:277 |
| Aaloc | 10-48:1 |
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