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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:72878..78334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018902 ID=XLOC_018902|Name=XLOC_018902|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5457bp|location=Sequence derived from alignment at sc0000067_pilon:72878..78334- (Clytia hemisphaerica_ch_hm2_pilon)
GACGATTGTGATCAATTTGTGCCTGAATCATCACATCAAACGCCGGAACA
GTAAGTTTTGATATTGCTATCTGAAAACGACGTACTATAGGGATCTACAG
GGATGTAATTCGTATGATAATTATGCTGTGCTGTGATTTTGTGATTTTTT
CTTTCTTCTACTAATCTTGCTATAACCAAAAGGATTAAACGGAAACTAAT
TCTTTGTTTTTAAACTGTTTTAAGCTGACCTCTTCAGGTCATGCCTATTG
TTTGTTAAACCTAGTTAAACAAATAAACTTTCAGTAGAAGAGACTGTTTT
TCAAGTGTGACCACAAACTCACGCTTATGTAGCCCAGTGTAGCCTTATAT
GCCTTTGTCTTTTATCTTTAAAGATTTTTCTTTTATGTGCCTAGAAAAAA
AACCTTTGACAGCCATCATTCGCCAAAATTAGTAAATGCGAAAAATATTT
TCTAGGCGTGCAGAAATTAATACGTGTGAGAATTATACCAAGAAGGTAAT
CCATAAAATTATTCTGTATTTCTTAAGGTTTTCAATGAATGACACTTCGA
CATCAAATTCATCGTCCAACGATCCATTAGACAAAACTCCAGTAAAAAAG
ATGTAAGTTAACCAAATTGAATTAGCTGTTACCTAATAGAAGAGAGAAGC
GAGAGAAGCGGACCCTCCGAGGCCATTGCGACACACAGAGTCGTGGTGTA
TCGAGGATGATAATCCTACAGTACGGGAGAACATTGCGTTCTCGCAGGGA
CTGAACCTATGAGTACCACACCACATACAATGTCAGGCATATCTCCCCAT
ACTCTTGTATCAGAGTGATGGTATCCAATTCCCCTCACATGGTATGGGTT
AACCCGGGAGAAGGTACAATCACTTGCTAAGTGAATCGCAGCACTGAGTG
GCAATCGAACCCTGACCTCCAGCATGGAAGTCAAGAACGATGACCACTAC
ACTACTGCACCTAATAGAAGAGGGAGAAATAATCCACACTTCGGAAATAA
GTTGTTTATGGAAATTTTTTGAGTGCTGATTTAGGCTGAAAATCAGTATT
CAGTCTACTCCTACACGCTTTTTTTTTTATAAGAATACCTTTTATAAGAA
TATTAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATACCCTC
CAGGGTGAGTTTTAGTCAATTGATAAGAATAAGACTGTCATTTTTCAGAA
AATGGTAAAACAAAAGTGACACAGATAATTTAACAAAAGAGATATTGTAC
TTTCTTTCGTGTGTGTTACGTTTCTCTGAAATAATAAGAATACGTTAAGA
ATATTTCACCCTCAATTTTGGCAATTTCTTAAGAATACTTGACCCTCAGT
CAAAGTACACTATTCTTATAAAAAAAAAAGCGTGTACATGCACCAAAATG
GCCAGAATACCTCAAATAGGTATTTCTGTGAGGAGCTTGTACCTACTTGT
CGTTTAGTATTATAGCCAACTTGCTTTGAACTTTTACAATACTACAAAAA
GAAATTCTAAAAACAACTTATGTCCGAAGTGTGGATTGTGTCCCCCATAT
AACCTTATCACATCGCAAATTCTCAAACATTAAGAAAAACACACGATAGA
AGCACAGAAGAGTACAAAAACTGACACAAATTAATTAACGAGATATTGAG
GATATTAGATTCATATATTCAATCAAAAGTTGATTAATCTTTTATTGAGC
CCATGAATTATTTTTACAATCGTAGCGCTTTTTTAACTAGATATTCGATG
AATCATATGGATTGGTCTCCATCGATTTTATCATCCCCGATGTTATCAGT
GCCAACGAATCTATTGGATAAATCGCCGACAAAAAGCATGTAAGTTATAC
TTTTAACACAAAGAGGATGACCATTCATTGTAAAGTAAAAACTAAATGGA
GACATTTCCAGTAAAACAATGAAGGTTGTGTTTTTTATATGTCAACAACC
AACCAAATATTCGTAACTTGAAATTAAACGAAAATTAAAATCGAAATCGA
CAGTTAAATTTTTTGTCAAATGTCAACAGAGTATTTCAGTTGCCGCTGGT
TTTTTTTACTTGATATTTATTTTTCGGGTGCAAGTTCAATTGAAAACCTG
TTAATTTGGTATTGGAGCATTTATTTTTTAAATGCCTAATACAATATTTG
ACTTCAAAAAGTTGATCCACATTTTATTGTGTCGAGGATTGTATTAAGGA
TATCAGATTCATGTTATGTTAGAAGTTGATAAAGTTTATAATTATTGAGC
CTATGAAAATCGAAACTTATTTTTTTCAATCATGGCGCTTTTTGGACCTA
CCCCGGTGGGCTGTAGGTCCTATAAATTAACCTCTGTTCGTCCGTTCGTT
CGTTCGTCCGTTCGTTACTAGCTTTTCTCGGGATTGGCTCATTAGTTTTT
CCTAATTTTTGGCACAAAGATGCAAAATGGTAATGCCCAAAATGTGACGG
AGCCCGATTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGGAAATAT
GCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCATTAGTTT
TTTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAACATGGA
TTAGTCCGATTTTTGAGAAAAATTCTATTCCGGCTGAAAATGCCGGAAAT
ATCCCGGAAATCGCCGTTTTTGCAGATTTTCATTGGACTTTTTCCTTATA
TTTCGTTGTTTTTTCACACAAAAACATTATTTGTAGCAATGCCCACCATC
AAGCATGGTTTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACTTTCT
AAAAATCGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTTCTTGAA
TTTCTCGAGCTGTACTTTATATTTTTTCATGAAATTTTGCACACTGATGC
AAAATGGCAATACCTAAAATATGACAGAGCCTGATTTTCAATTAACGTAC
TTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGGC
ATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGAT
GCGTATTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAAAAAT
TCCATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGC
AGATTTTCATTGGACTTTTCCCTTATATTTCGTTGTTTTTTCACACAAAA
ACATTATTTGTAGCAATGCCCACCATCAAGCATGGTTTAATTGTCAATAA
AAGTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATT
TTCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTACTTTATATT
TTTTCATGAAATTTTGCACACTGATGCAAAATGGCAATACCTAAAATATG
ACAGAGCCTGATTTTCAATTAACGTACTTTTCCGGCCGAAAATGCCGGAA
ATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCATCATTA
GTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCTAAAACA
TGGATTAGTCCGATTTTTGAGAAAAATTCCATTCCGGCTGAAAATGCCGG
AAATATCCCGGAAATCGCCGTTTTTGCAGATTTTCATTGGACTTTTCCCT
TATATTTCGTTGTTTTTTCACACAAAAACATTATTTGTAGCAATGCCCAC
CATCAAGCATGGTTTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACT
TTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTTCT
TGAATTTCTCGAGCTGTACTTTATATTTTTTCATGAAATTTTGCACACTG
ATGCAAAATGGCAATACCTAAAATATGACAGAGCCTGATTTTCAATTAAC
GTACTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTT
TGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAA
AGATGCGTATTAGCAATGCCTAAAACATGGATTAGTCCGATTTTTGAGAA
AAATTCCATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTT
TTGCAGATTTTCATTGGACTTTTTCCTTATATTTCGTTGTTTTTTCACAC
AAAAACATTATTTGTAGCAATGCCCACCATCAAGCATGGTTTAATTGTCA
ATAAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCC
TATTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTACTTTA
TATTTTTTCATGAAATTTTGCACACTGATGCAAAATGACAATACCTAAAA
TGTGACGGAGCCCGATTTTCGAAAAATATTTTTTCCCGGCCGAAAATGCC
AGAAATATGCCGGAAAACCGTTTTTTTTTTACATTTTCTCGAATTTTCTT
TTTTAGCTTTTTCTGATTTTTTTGCAGAAAGATGCGTATTTGCAATGCTC
AAAACATGGCCGAGTTCGATTTTTGAGAAAAAATTTTTTCCAGTTGAAAA
TGCCTGAAATCGCCTCTTTGCAGATTTTCATTATATGTTTTCCTTGTATT
TCTATGTTCTTCACACAAAAACATTATTGATAACAATGCTCACCATCAAG
CATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTTCTATT
AATTTTTCCCTACAACCCTTCCCTCTCCCCCTATCAACAATCAATGATGA
ATTTATTGCGTTATGCATTTTCGCTAAACGATATATTTTCTGACTGATTT
TTTTCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCA
GCATCTAGCTTGTTTAACTAGACATTCAATGAATCATATGGCTTGGTCTC
CATCAAATTTGTCGTCTTCGATGTTATCAGTGCCAACCAATCTATTGGAT
AAATCGCCGACAAAAAGCATGTAAGTTATACTTTTAACACAAAGAGGATG
ACCATTCATTGTAAAGTAAAAACCAAAATGATTCATTTCTGTGCAGAGTA
ATCTCAAATAACCCTAAACTACACAATTATCATCATTGCACCTGTATAGA
TAATTACCATTCTTAAAGGTTATTTAAACCATATTTTTATTTAACGATCT
TTAAGTAATGCTACGCGTTCAACAGATGAAGGTCGATCGGAGAATGCAGT
ATTAATGGACAGGTAATATACTTTCGTTTAAAGTAATATTCAAAATACAT
CAGTCAAAACTATGTCTAGTTGTACTTTCATTCTGCTTTTCTGCTGGTAC
ACCCCGGAACCTGTTTTTTTTTCAATTTAAGTTTTCGAGCCTAACTCAAA
ACCAAAATAGCCAAATTTTCAACTTTTATTACAATTATTCTTTTTTATGT
TTTTCCAGGAGTGCTAGCAATCAAGATGATGTTCAGTCAAACCCTCCAAA
AAAAGTC Coding sequence (CDS) from alignment at sc0000067_pilon:72878..78334- >XLOC_018902 ID=XLOC_018902|Name=XLOC_018902|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=858bp|location=Sequence derived from alignment at sc0000067_pilon:72878..78334- (Clytia hemisphaerica_ch_hm2_pilon)
GACGATTGTGATCAATTTGTGCCTGAATCATCACATCAAACGCCGGAACA
GACGATTGTGATCAATTTGTGCCTGAATCATCACATCAAACGCCGGAACA
GTTTTCAATGAATGACACTTCGACATCAAATTCATCGTCCAACGATCCAT
TAGACAAAACTCCAGTAAAAAAGATGTTTTCAATGAATGACACTTCGACA
TCAAATTCATCGTCCAACGATCCATTAGACAAAACTCCAGTAAAAAAGAT
ATATTCGATGAATCATATGGATTGGTCTCCATCGATTTTATCATCCCCGA
TGTTATCAGTGCCAACGAATCTATTGGATAAATCGCCGACAAAAAGCATA
TATTCGATGAATCATATGGATTGGTCTCCATCGATTTTATCATCCCCGAT
GTTATCAGTGCCAACGAATCTATTGGATAAATCGCCGACAAAAAGCATAC
ATTCAATGAATCATATGGCTTGGTCTCCATCAAATTTGTCGTCTTCGATG
TTATCAGTGCCAACCAATCTATTGGATAAATCGCCGACAAAAAGCATACA
TTCAATGAATCATATGGCTTGGTCTCCATCAAATTTGTCGTCTTCGATGT
TATCAGTGCCAACCAATCTATTGGATAAATCGCCGACAAAAAGCATTAAT
GCTACGCGTTCAACAGATGAAGGTCGATCGGAGAATGCAGTATTAATGGA
CAGTAATGCTACGCGTTCAACAGATGAAGGTCGATCGGAGAATGCAGTAT
TAATGGACAGGAGTGCTAGCAATCAAGATGATGTTCAGTCAAACCCTCCA
AAAAAAGTCGAGTGCTAGCAATCAAGATGATGTTCAGTCAAACCCTCCAA
AAAAAGTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:72878..78334 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 382-429:49 |
| Aaloc | 325-378:302 |
| Aaloc | 226-321:586 |
| Aaloc | 127-222:3717 |
| Aaloc | 52-123:4930 |
| Aaloc | 1-48:5458 |
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