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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:1086101..1090245+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018852 ID=XLOC_018852|Name=XLOC_018852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4145bp|location=Sequence derived from alignment at sc0000058_pilon:1086101..1090245+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGTATCAATTGGATGCCCAGCAAACCGACACCTCTTTCTCATTCC
ATCGAGAAGGTGAGTTTCATATCATTACTGGTGAGAAGGCAACGGCAACT
TTTGCGAGCAGAGAGCATGTAGTCAAtatctgatttttttatttttctaa
aacagcgatgcattgtgggattgttttggggtattacaataaaattccct
cgaggaattcctaagagatttctattgtaatacccccgaatcaatcccac
aatgcatcgcttttttagaaaaatcaacaaCTCCAATAAGATCTATAAGA
TGGTTTCCAAGATTGTAACCTTTAGAAATAAACTCCAGATTTCCGTAACT
CGAACGAATTCGGCTTCCCGTGCGTGTTCAAGTTACGCAGAGCACTCGCG
GGTAATGGCTTCCCCAGATTGAATGCGAAGGGTCCATAAGGGGAGGCGAA
TCTCTGCGAGGGTGaaaaaaaagtgagcaaaacataAGTTTCTGGAAAAT
GTTAGGAAAATTGCTATAAACTACAGTAGacgaaattttttatcaaattt
agaatATCATTTTCTGTGCGTCAAATGCGAAAAGTTGGCAAAGGAAATAG
ACTCATTTGTTAAGTTTTGTCCCTTGTGAAATTACGATTCTGTCAGACTT
CACGgggaccactgacctttatatatccctggaccaagctatatctgcca
tctttgatcgaagttttttgaaagtcggTACCCGCAAATAAGCCATCATA
GTGGTTGAAACTTTGCCcaacgacaaacggcgctacatcattagtgtaca
agcgaaactagatctagcgctctctccgcgggtGCCAATTTCAAAAGTAC
TCCGATcgtaatattttgcttggccggtattgagtaacttggtccaggga
tatataaaggtcagtgatgaGTACCCTCTAAATGGTAAACTATTATTTAC
ACTCTCTTTTTGATTTTAAGCTCACATGGACATGATCATGAAAGTGAAAC
AGATCAGGTACACTTTCGAACCACACAGACAAATTTTCGGGTGAATCcgc
caaatttgccaaatttcttATCGTcaatagcataccgcagtgattctaaa
aatacTGTTTGTCCGAATTTTAGtcccatcatcctttgcattaattgctt
ttggaagtcaattacacttatcgataatacaaaagtaataactagtacgc
attacgaatcaagatgaaaaggattgtgggattgaatttcggtcaaatgt
taaaagtaataattatgacgtttgcatagcggtGTGCTATCGGAATTGCC
GACAGCCAAAACAATCGCTCAAATTTGAACGAAATTTATTTAACGAGCTT
TACtgtgaaaaagttgaaaaactgATTGTCACTCATCTTCGTCCAGGTGC
AGTTAGAGTTGGAAATTTCTTTAAACCaatgtcattttgttttttttaga
cgGGTGtgattgaaatcaaaaaaagcGAAACATTATCGATGCATTTTGAC
CTGTAAGTGGTCTTCAATCAATGATCAGTTTGACAATATATGATATTGAA
ATCAGAAGAAATTATAGATGAAATTATAGATGAAATTTAGCTCAAAGATT
CAATCTAGTACTTTATTCTCCATATATTACATTCTGCAGTATACATAAAC
ATAATGAGAACTTCACATTTTCGTACATACTTTCACACTATAAGTAATCA
TTTACCCATCAGTTTATAATATTAATGTCTTCTGCTTACGCCTGATATTT
GTGTAGTGCACAGTTTATAATTTCACTTTCAGTTTTGGTAATGGAGATTA
TATTGGACCTGCAGAaggaaaattgaagattttatcACAATCACCTCTTT
CTATAGCACAAAAGGTATCGTTTGCGTTCCTCGGCTTAATGTGAGCTGTG
GGAACTTTTCGCGGAAACTGATTTTCGCTAGCGGGTTCTAGTTGTATATT
TGGCCATTTttcatcgaaaaatttgaaaaattcctaggaaaatgaaagaa
atgtgttcaaaataggacaaaaccgcgaaaaGTAATTACCGTaaaatgtg
atttttaaaattttttacagctgcaaaaattttttcccacTAAATtggtt
cccttaaggtaaaaaCAATTATGATAATCTTCGTACCCAGAGGagccact
tgcaccactttttgattttactgggATGGACGTTAGCACAATCgcgagcg
ctatcagaatcataaaaaattgaactaAGGGAGTTCGAGTTTGCAATTAT
GGTACTTTTTACGCCATGAAAAAGAGAATGATTATAACATTAGTTACTAT
TACGAGTTATCAGTTATCAGTGTTCCAAATTTGCAAAGTTacttcaatgt
ttttttttttcagacaacTGATGGAAGCGATTTGACTCTCTCGTGCAACC
AAATCGGAACATTTGATGCTCAAATCGAATTAGAGATTTCTGAAAGGTAT
GCTAGAGAAAGATACAATGAATATCTTTTCCCACAGAAAAACTCACAGAA
ATACCATCTCCACTGGGAGAAGTAATTGTAATTTTGAGAATCACTAGTGC
ATTTCACAGTTATTTATCACTGAGACAAAGAGGGGTAACCTAGTTTGTAC
ATCTGtgctaaatttcgcgaaaatgtccaaaattccCCACAATAAGGGAG
TAAAATAACTTAAATCTccgtaatagacgatatcggctttacatgaaaac
tcagatttgacccccgagaattgcccacgatgctttgcgcggaaaaaagt
tcacggtgaaattttttctGCACAAAGCATTATGGGGAATTCTCAGgagt
caaatctgagttttcatgtaaagccgatatcgtctattcgaACACGTACG
GGGAACATAGTTTAGTTCAAACTattgaaatttcgagttatggagattgg
tttatattttaaaagttatcttccatcaaaaaaaataaaaagtacatcAC
TCAGATTCGTTTATAAGATACTGTTAATTGAGGGGAccaaaaaacttgtt
cgagctgaggagacattcgagttgtagaggttcgagttatgaaaacACTG
TACTTTCATTCCTTAAACCTAAATTTATGGATGATGATTCTTTTGGCCgg
tttgaaattcaatatttttatttttacttgtcTAACCATCTACttttttt
tAGCTTATGCATACTTCAGACAACTATTCGAGTCAACGTGCTGGACAACG
GGAAATTCGAACGCAATCTGGTCATTATTATCTCTATAAGTTTCAGCATC
ACTGTTTGTATTATCGCCATGATAGTCAGCTTCATGATGTTCAAGAAAAA
CACTGCCAAAGAGCAtgcaatagaaaaagaaaatcaagcaAGACAGGCTG
AACTACGGTATGCGCTATCTGAATACATCTCTGTTATATTCACTTGCTTA
CTCTTTTATTGTGAACAGACAGGGGCCTGATTAAACAGAAATGTTTGAAA
GTCTTACTAGACAGGGAGTTTTGGAGTATGCATGGACGATcatatcgtct
acacaagatcactaaaaaggggAATAGTTTAGggggcgtgataaattcgg
gtggagtaagcagtggcggagatatTTAGTTTGTTACACACAATACCGCC
acttttcccgtaaaccgcccagACGCCCTGACTGTGCGTCCCTCTAAAAC
GGACCATAGAATAGTCTAGCATGGAGTATACAAGTTCCTTAGAATAAGCG
GAATGGgattgatttgaaaagaatcttttttcgtAATTTTATCCAGACAA
TATTTTATGATTTGTTCAATtctaatcaattttaaaatacattGAAATAA
GATATTAAAATTCTTGGATTTTATAAGTGGAGGGGAACACAAAGTATTCC
TCCATCAAATGACATAATGATGCTGTGAGCGGTGTTTTCTGTTTTAAAAA
TGAATCAACATTATTTTATCTATAGGTTTTTGGCTTCAATGAAACATTAC
CAAGAGCAGATGGAGATAACCGCAAGTATGTCGAAAAAAGGAAGCACAGG
TTTGGCGAAGCATGCTCGTTTGTCGGAACTCGGTGGACAACGTAAGAGTT
CGTTATCCCGACGAAATAGTTCGATTGTTTCTCGTGAGCATGTCGAACAA
ATACGAAAAGCAATGAGCGTGACTCAATCCCCTTCATCAACGTAA Coding sequence (CDS) from alignment at sc0000058_pilon:1086101..1090245+ >XLOC_018852 ID=XLOC_018852|Name=XLOC_018852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000058_pilon:1086101..1090245+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGTATCAATTGGATGCCCAGCAAACCGACACCTCTTTCTCATTCC
ATCGAGAAGATGTATGTATCAATTGGATGCCCAGCAAACCGACACCTCTT
TCTCATTCCATCGAGAAGCTCACATGGACATGATCATGAAAGTGAAACAG
ATCAGCTCACATGGACATGATCATGAAAGTGAAACAGATCAGacgGGTGt
gattgaaatcaaaaaaagcGAAACATTATCGATGCATTTTGACCTacgGG
TGtgattgaaatcaaaaaaagcGAAACATTATCGATGCATTTTGACCTTT
TTGGTAATGGAGATTATATTGGACCTGCAGAaggaaaattgaagatttta
tcACAATCACCTCTTTCTATAGCACAAAAGTTTTGGTAATGGAGATTATA
TTGGACCTGCAGAaggaaaattgaagattttatcACAATCACCTCTTTCT
ATAGCACAAAAGacaacTGATGGAAGCGATTTGACTCTCTCGTGCAACCA
AATCGGAACATTTGATGCTCAAATCGAATTAGAGATTTCTGAAAGacaac
TGATGGAAGCGATTTGACTCTCTCGTGCAACCAAATCGGAACATTTGATG
CTCAAATCGAATTAGAGATTTCTGAAAGCTTATGCATACTTCAGACAACT
ATTCGAGTCAACGTGCTGGACAACGGGAAATTCGAACGCAATCTGGTCAT
TATTATCTCTATAAGTTTCAGCATCACTGTTTGTATTATCGCCATGATAG
TCAGCTTCATGATGTTCAAGAAAAACACTGCCAAAGAGCAtgcaatagaa
aaagaaaatcaagcaAGACAGGCTGAACTACGCTTATGCATACTTCAGAC
AACTATTCGAGTCAACGTGCTGGACAACGGGAAATTCGAACGCAATCTGG
TCATTATTATCTCTATAAGTTTCAGCATCACTGTTTGTATTATCGCCATG
ATAGTCAGCTTCATGATGTTCAAGAAAAACACTGCCAAAGAGCAtgcaat
agaaaaagaaaatcaagcaAGACAGGCTGAACTACGGTTTTTGGCTTCAA
TGAAACATTACCAAGAGCAGATGGAGATAACCGCAAGTATGTCGAAAAAA
GGAAGCACAGGTTTGGCGAAGCATGCTCGTTTGTCGGAACTCGGTGGACA
ACGTAAGAGTTCGTTATCCCGACGAAATAGTTCGATTGTTTCTCGTGAGC
ATGTCGAACAAATACGAAAAGCAATGAGCGTGACTCAATCCCCTTCATCA
ACGTAAGTTTTTGGCTTCAATGAAACATTACCAAGAGCAGATGGAGATAA
CCGCAAGTATGTCGAAAAAAGGAAGCACAGGTTTGGCGAAGCATGCTCGT
TTGTCGGAACTCGGTGGACAACGTAAGAGTTCGTTATCCCGACGAAATAG
TTCGATTGTTTCTCGTGAGCATGTCGAACAAATACGAAAAGCAATGAGCG
TGACTCAATCCCCTTCATCAACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:1086101..1090245 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-738:3927 |
| Aaloc | 316-516:3155 |
| Aaloc | 232-312:2364 |
| Aaloc | 151-231:1784 |
| Aaloc | 97-147:1450 |
| Aaloc | 61-96:972 |
| Aaloc | 1-57:1 |
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