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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:65209..67176- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018482 ID=XLOC_018482|Name=XLOC_018482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1968bp|location=Sequence derived from alignment at sc0000098_pilon:65209..67176- (Clytia hemisphaerica_ch_hm2_pilon)
TCGGCCGTCTTGCATGGTACACGAGAACGCCAAGAGAGATTGAAGAATGG
AATAACACAAATCCGCTACAAATATACTTTTGCGGATATCGTGTACATTA
CAGATGTTACAAGTACCCATGAGATCACAAGTTGGGTCTTACCGCTACCT
CTGGATTCAGTCCGCGTTTCTGATAACGATCAACACCAATACAACGCCGC
AGTATCGCGCATTGCTCAAGACCCGAAGATCATCACATCGCATTCAGTGT
TCGTGATCGACTGCAGTGGATCAATGAAATCAGCAGACGTTGAAGCACAT
CGCTGTCGAGCAGATGCCGTCAGTTATTCAGTGGCCAGTGAATTCATCGC
AAAGCGACTTCACAACCCATCTTTTGGTGTGACACCTTATAACGTGGTAA
CAGTGATTGAGATGAGAGAAGACGCACAAATTGTGTTTAAGAAAGAACCC
ATGAGTTGGGTATTTTACAACAAGTTCGTGCAACGATCAAAGACCAGCAA
ACCGAGTTCACACGGCAGCTACATCCCTTCTCTTGACTTGGCCATGCAGG
CTCTTAAGGAGAATGACCACGAACATTTGGCGCTGTTTCTCTTCTTTCTA
TCGGATGGTCGTCCAAGCGATGTGTGGTTATCTAAACACGGAGACAGTAT
CTATCCGTCTGTGTCAAGACAGGATATCTACAGACGAGCTTCGGCTATCG
GCAGTCACTTTCAGGAGAGACTCAACTTTGGTATGGTTGGGTTTGGTCGA
CCGTTCGATGATCTGAGTGTTCTCAATGAAATGGCTAACCAAATGACGAT
TCAGGGAGCTGTTGGAAGTTTCCATCGATCTGATTTGAAGAAAATCAACT
CCTTGTCAACATCACTTGCCAACATGTCAAGCACACTCACAAAGACGTGT
ACCTTGCTTACAAATGCACGTGTCGGAGATTCACGCAAAGAGCGATCTGT
CACCATATCTCAGTTCCAAAAGCACATCATTATTCCGCCCAATGATTGGG
ACAGCAAAACTGTTCGCCAGAACCGACTCGTTTGCTCCGAGTTGACGAGA
CACGAGACAGGTTTTGTGTGGACACAGCGCCATCTTTTAGAGCCCAAAGC
AGCCGGAATATCGTTTAGTAATGATCCTTTTGGAAAAGGTGCCGAACGTC
TTGTGTATCAACTACGTGAAATCGATGCCAATGGCAAAATAATTGGCACT
CCGTTGGTCGCCAAAGATGGAAAATATGTCGAGGATTACAATCAACTTAA
AGATTTTCATTATTCCTTCTGTAAAACACAAAAGATCGCTGCAAACTTAG
CTGTAAAGTTCAATGACCGACTTGATCAATCTCCACAAGTGGCAAAAACT
GTTCCCCGAGTCAAATTCCTTGACTGTTTTGTCTATACATTTTATGACCA
GTACGATGAATACAATTACTTGGTGGAGAAGCAACTTGATCACAATCAGT
ACAGGAAATGGAATGACAATCAAGGTGGAATACAAGGTCAAAAGAAAGTG
GAATCTCCGTACCCAGGGATGGTGAAAGAAGTAGCTCCTCTCCAAATGTT
GAAAGATTTGAAATTAAAACCCATCATGTCAGACATCATCGAAGAAGAGA
ACTCGGAAGACGAAGAAGATGATGCAAGCGATGATGAAGCGTCTCGCCGT
CCAGAACCCCAACCCACTGTAACCACAAGTAATGTGGCACCAAAAAGTGA
ACTGGACATACTTAACGAAGACGTTCCTCAAGCATTCAGCCATTTCTCTC
ACAAACGAAGCCGACGAAGAAGAATGGTTTGTGATCTACAAGGCGTCTTA
GATACGTCACAGAAGCCACCGATGTTCGAGCTGACAGACCCGGTCATTCA
CTACAAGTCAAGCAGAAACCGCGAGAATGTTTACGGGAAGACAGACAAAG
GTCAGAAAGGAATCAATGATTTCTTCCAGACCCATAAATGTAACAACTTG
TGCAGAGCACTTGGCATC Coding sequence (CDS) from alignment at sc0000098_pilon:65209..67176- >XLOC_018482 ID=XLOC_018482|Name=XLOC_018482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3936bp|location=Sequence derived from alignment at sc0000098_pilon:65209..67176- (Clytia hemisphaerica_ch_hm2_pilon)
TCGGCCGTCTTGCATGGTACACGAGAACGCCAAGAGAGATTGAAGAATGG
AATAACACAAATCCGCTACAAATATACTTTTGCGGATATCGTGTACATTA
CAGATGTTACAAGTACCCATGAGATCACAAGTTGGGTCTTACCGCTACCT
CTGGATTCAGTCCGCGTTTCTGATAACGATCAACACCAATACAACGCCGC
AGTATCGCGCATTGCTCAAGACCCGAAGATCATCACATCGCATTCAGTGT
TCGTGATCGACTGCAGTGGATCAATGAAATCAGCAGACGTTGAAGCACAT
CGCTGTCGAGCAGATGCCGTCAGTTATTCAGTGGCCAGTGAATTCATCGC
AAAGCGACTTCACAACCCATCTTTTGGTGTGACACCTTATAACGTGGTAA
CAGTGATTGAGATGAGAGAAGACGCACAAATTGTGTTTAAGAAAGAACCC
ATGAGTTGGGTATTTTACAACAAGTTCGTGCAACGATCAAAGACCAGCAA
ACCGAGTTCACACGGCAGCTACATCCCTTCTCTTGACTTGGCCATGCAGG
CTCTTAAGGAGAATGACCACGAACATTTGGCGCTGTTTCTCTTCTTTCTA
TCGGATGGTCGTCCAAGCGATGTGTGGTTATCTAAACACGGAGACAGTAT
CTATCCGTCTGTGTCAAGACAGGATATCTACAGACGAGCTTCGGCTATCG
GCAGTCACTTTCAGGAGAGACTCAACTTTGGTATGGTTGGGTTTGGTCGA
CCGTTCGATGATCTGAGTGTTCTCAATGAAATGGCTAACCAAATGACGAT
TCAGGGAGCTGTTGGAAGTTTCCATCGATCTGATTTGAAGAAAATCAACT
CCTTGTCAACATCACTTGCCAACATGTCAAGCACACTCACAAAGACGTGT
ACCTTGCTTACAAATGCACGTGTCGGAGATTCACGCAAAGAGCGATCTGT
CACCATATCTCAGTTCCAAAAGCACATCATTATTCCGCCCAATGATTGGG
ACAGCAAAACTGTTCGCCAGAACCGACTCGTTTGCTCCGAGTTGACGAGA
CACGAGACAGGTTTTGTGTGGACACAGCGCCATCTTTTAGAGCCCAAAGC
AGCCGGAATATCGTTTAGTAATGATCCTTTTGGAAAAGGTGCCGAACGTC
TTGTGTATCAACTACGTGAAATCGATGCCAATGGCAAAATAATTGGCACT
CCGTTGGTCGCCAAAGATGGAAAATATGTCGAGGATTACAATCAACTTAA
AGATTTTCATTATTCCTTCTGTAAAACACAAAAGATCGCTGCAAACTTAG
CTGTAAAGTTCAATGACCGACTTGATCAATCTCCACAAGTGGCAAAAACT
GTTCCCCGAGTCAAATTCCTTGACTGTTTTGTCTATACATTTTATGACCA
GTACGATGAATACAATTACTTGGTGGAGAAGCAACTTGATCACAATCAGT
ACAGGAAATGGAATGACAATCAAGGTGGAATACAAGGTCAAAAGAAAGTG
GAATCTCCGTACCCAGGGATGGTGAAAGAAGTAGCTCCTCTCCAAATGTT
GAAAGATTTGAAATTAAAACCCATCATGTCAGACATCATCGAAGAAGAGA
ACTCGGAAGACGAAGAAGATGATGCAAGCGATGATGAAGCGTCTCGCCGT
CCAGAACCCCAACCCACTGTAACCACAAGTAATGTGGCACCAAAAAGTGA
ACTGGACATACTTAACGAAGACGTTCCTCAAGCATTCAGCCATTTCTCTC
ACAAACGAAGCCGACGAAGAAGAATGGTTTGTGATCTACAAGGCGTCTTA
GATACGTCACAGAAGCCACCGATGTTCGAGCTGACAGACCCGGTCATTCA
CTACAAGTCAAGCAGAAACCGCGAGAATGTTTACGGGAAGACAGACAAAG
GTCAGAAAGGAATCAATGATTTCTTCCAGACCCATAAATGTAACAACTTG
TGCAGAGCACTTGGCATCTCGGCCGTCTTGCATGGTACACGAGAACGCCA
AGAGAGATTGAAGAATGGAATAACACAAATCCGCTACAAATATACTTTTG
CGGATATCGTGTACATTACAGATGTTACAAGTACCCATGAGATCACAAGT
TGGGTCTTACCGCTACCTCTGGATTCAGTCCGCGTTTCTGATAACGATCA
ACACCAATACAACGCCGCAGTATCGCGCATTGCTCAAGACCCGAAGATCA
TCACATCGCATTCAGTGTTCGTGATCGACTGCAGTGGATCAATGAAATCA
GCAGACGTTGAAGCACATCGCTGTCGAGCAGATGCCGTCAGTTATTCAGT
GGCCAGTGAATTCATCGCAAAGCGACTTCACAACCCATCTTTTGGTGTGA
CACCTTATAACGTGGTAACAGTGATTGAGATGAGAGAAGACGCACAAATT
GTGTTTAAGAAAGAACCCATGAGTTGGGTATTTTACAACAAGTTCGTGCA
ACGATCAAAGACCAGCAAACCGAGTTCACACGGCAGCTACATCCCTTCTC
TTGACTTGGCCATGCAGGCTCTTAAGGAGAATGACCACGAACATTTGGCG
CTGTTTCTCTTCTTTCTATCGGATGGTCGTCCAAGCGATGTGTGGTTATC
TAAACACGGAGACAGTATCTATCCGTCTGTGTCAAGACAGGATATCTACA
GACGAGCTTCGGCTATCGGCAGTCACTTTCAGGAGAGACTCAACTTTGGT
ATGGTTGGGTTTGGTCGACCGTTCGATGATCTGAGTGTTCTCAATGAAAT
GGCTAACCAAATGACGATTCAGGGAGCTGTTGGAAGTTTCCATCGATCTG
ATTTGAAGAAAATCAACTCCTTGTCAACATCACTTGCCAACATGTCAAGC
ACACTCACAAAGACGTGTACCTTGCTTACAAATGCACGTGTCGGAGATTC
ACGCAAAGAGCGATCTGTCACCATATCTCAGTTCCAAAAGCACATCATTA
TTCCGCCCAATGATTGGGACAGCAAAACTGTTCGCCAGAACCGACTCGTT
TGCTCCGAGTTGACGAGACACGAGACAGGTTTTGTGTGGACACAGCGCCA
TCTTTTAGAGCCCAAAGCAGCCGGAATATCGTTTAGTAATGATCCTTTTG
GAAAAGGTGCCGAACGTCTTGTGTATCAACTACGTGAAATCGATGCCAAT
GGCAAAATAATTGGCACTCCGTTGGTCGCCAAAGATGGAAAATATGTCGA
GGATTACAATCAACTTAAAGATTTTCATTATTCCTTCTGTAAAACACAAA
AGATCGCTGCAAACTTAGCTGTAAAGTTCAATGACCGACTTGATCAATCT
CCACAAGTGGCAAAAACTGTTCCCCGAGTCAAATTCCTTGACTGTTTTGT
CTATACATTTTATGACCAGTACGATGAATACAATTACTTGGTGGAGAAGC
AACTTGATCACAATCAGTACAGGAAATGGAATGACAATCAAGGTGGAATA
CAAGGTCAAAAGAAAGTGGAATCTCCGTACCCAGGGATGGTGAAAGAAGT
AGCTCCTCTCCAAATGTTGAAAGATTTGAAATTAAAACCCATCATGTCAG
ACATCATCGAAGAAGAGAACTCGGAAGACGAAGAAGATGATGCAAGCGAT
GATGAAGCGTCTCGCCGTCCAGAACCCCAACCCACTGTAACCACAAGTAA
TGTGGCACCAAAAAGTGAACTGGACATACTTAACGAAGACGTTCCTCAAG
CATTCAGCCATTTCTCTCACAAACGAAGCCGACGAAGAAGAATGGTTTGT
GATCTACAAGGCGTCTTAGATACGTCACAGAAGCCACCGATGTTCGAGCT
GACAGACCCGGTCATTCACTACAAGTCAAGCAGAAACCGCGAGAATGTTT
ACGGGAAGACAGACAAAGGTCAGAAAGGAATCAATGATTTCTTCCAGACC
CATAAATGTAACAACTTGTGCAGAGCACTTGGCATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:65209..67176 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1795-1953:160 |
| Aaloc | 1696-1794:265 |
| Aaloc | 1243-1695:724 |
| Aaloc | 1063-1242:907 |
| Aaloc | 922-1059:1045 |
| Aaloc | 643-921:1327 |
| Aaloc | 43-642:1930 |
| Aaloc | 1-39:1969 |
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