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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:502712..504490- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018400 ID=XLOC_018400|Name=XLOC_018400|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1779bp|location=Sequence derived from alignment at sc0000254_pilon:502712..504490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAGTGCCCCTGAGCTGACCATCGATACCTTCTACGGTGATCCAAT
GGAGTTCGAGTACTTTATGTCTACCTTCGAGGAAGTCATTGAAACAAAGA
TCGACGAAGACAGAAGGCGTCTGGCCAGTCTTATCCAATTCACTGGGGGC
GAAGCAAAGGACCTCATCAAAGGATGCAGCCTTCTTCGTCCAACAGAAGG
ATACCAGTCTGCAAAGACCTTGTTACGAAAAAGATATGGTGACCCATACA
GAATACTGGCGTCGTATCGTAAAGAAGTACAAGAACTAACACCAATCAAG
AACGCTGACGCTGCATCACTCCGAACTCTCTACTCTTTCCTGGTTAAAAG
CAAGTTTATCATCGGCAACAAGTTCGACACCCCCGACAACATTTGTCTTG
TACTGACAAAACTTCCTATCAGTATGAGGGACCGCTGGAATCGCTACGTA
TATCAAATTCGAACTTCCTTCCATCGTGAACCAAAATTCGACGACTTAAT
CGACTTCGTAGATAAAGAGACTGTGTTGGCCAACGATCCATTGTATTCAA
GGGAAGCGATGCACGGCGATACTGACAACAATGCATCAAACCGTAAAACT
GTAAGAACCTTTAATACTGATTTCTCAAAATGTCCATTTTGTGAAGAGGG
TCACGATCTAGACAATTGTCCAGAGTTTAAGAAAGTAGACTGTAAAGAGA
AAGGGAAATGGGCATTGAAGAGTGGTCGTTGTTTTTCATGCCTTAAACGA
GGGCACTTGGCTAAAGAGTGTAAAGCGCCAAGAAAATGTGAAGAGTGTGG
TGGCAAGCATCCAACATCATTTCATGGCTATAGAAAGGGTCTTTTCAAAA
CGGAAGCTACTAGTCCTGAAAAGCCATCAGAATCTTTAGAAATTCACGTA
ATTAGAAACAATGACTTTGTTAGTATGTGCATCGTACCAGTTTTTATCAA
ATTAAATCAGAATCGTGTGTTAACCTATGCTCTGCTTGATAATTGTAGTC
AGGGAACATTCATCGATAACGACTTGTTGTCACAACTTGGATCCAATTTC
CCAAAGACCACATTGAATATAAAAACTCTAAACGGAGAAGAAGTCACCAG
TGCTAAAGTAGTTGAAGGTCTTCAAGTATGTGGTGTGGATCAACCAGAAA
AATGGATAAACCTCCCAAAGACCTACAGTCGAAAGGATTTTTCGGTGAGC
GACAAACGACAACCAATCACCAAAGAGCTGCTCCAACGATGGCCACACCT
CCATCCTTTAAAGACCAAACTGTCCGAGACTGGCGACAATCATCCAATGA
AGGTTGGCATCCTAATTGGTGCAAACTGCCCCAAAGCAATTCAGCCCACG
AACGTAATCCCAAGTCCAGTTGAGAGAGGACCCTATGCCTTCGAGACAAA
CCTAGGGTGGTGCATAGCAGGTCCACTTGACAACACCAAACCAAACATCA
CGTCATGTTATCGTATCAACTTCGACTTGAAATCAGAACGAAAACCAACC
CATAGATTCGTGAAACAAGAGCAGGTGGCTGACCATTCGATCGAAAAAAT
GATTGGATCAGTCTATGGTGAAGAGCAAACAGTCAACGACAAATCATTAG
GTGACGAGTTCTCCCAAGACGACGTCAAGTTCCTGAGCATCATGAACACC
AACTGTCAAAAGGTAAGTGGACATTACGTTCTTCCCTTACCTTTTCGCAA
TGATAAAGTCAATTTGCCTAACAACAAATCACTTGCTTTGAAGAGGCTTA
ATCTATTAAAGAAGAAATTTTCTCGAGAT Coding sequence (CDS) from alignment at sc0000254_pilon:502712..504490- >XLOC_018400 ID=XLOC_018400|Name=XLOC_018400|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3558bp|location=Sequence derived from alignment at sc0000254_pilon:502712..504490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAGTGCCCCTGAGCTGACCATCGATACCTTCTACGGTGATCCAAT
GGAGTTCGAGTACTTTATGTCTACCTTCGAGGAAGTCATTGAAACAAAGA
TCGACGAAGACAGAAGGCGTCTGGCCAGTCTTATCCAATTCACTGGGGGC
GAAGCAAAGGACCTCATCAAAGGATGCAGCCTTCTTCGTCCAACAGAAGG
ATACCAGTCTGCAAAGACCTTGTTACGAAAAAGATATGGTGACCCATACA
GAATACTGGCGTCGTATCGTAAAGAAGTACAAGAACTAACACCAATCAAG
AACGCTGACGCTGCATCACTCCGAACTCTCTACTCTTTCCTGGTTAAAAG
CAAGTTTATCATCGGCAACAAGTTCGACACCCCCGACAACATTTGTCTTG
TACTGACAAAACTTCCTATCAGTATGAGGGACCGCTGGAATCGCTACGTA
TATCAAATTCGAACTTCCTTCCATCGTGAACCAAAATTCGACGACTTAAT
CGACTTCGTAGATAAAGAGACTGTGTTGGCCAACGATCCATTGTATTCAA
GGGAAGCGATGCACGGCGATACTGACAACAATGCATCAAACCGTAAAACT
GTAAGAACCTTTAATACTGATTTCTCAAAATGTCCATTTTGTGAAGAGGG
TCACGATCTAGACAATTGTCCAGAGTTTAAGAAAGTAGACTGTAAAGAGA
AAGGGAAATGGGCATTGAAGAGTGGTCGTTGTTTTTCATGCCTTAAACGA
GGGCACTTGGCTAAAGAGTGTAAAGCGCCAAGAAAATGTGAAGAGTGTGG
TGGCAAGCATCCAACATCATTTCATGGCTATAGAAAGGGTCTTTTCAAAA
CGGAAGCTACTAGTCCTGAAAAGCCATCAGAATCTTTAGAAATTCACGTA
ATTAGAAACAATGACTTTGTTAGTATGTGCATCGTACCAGTTTTTATCAA
ATTAAATCAGAATCGTGTGTTAACCTATGCTCTGCTTGATAATTGTAGTC
AGGGAACATTCATCGATAACGACTTGTTGTCACAACTTGGATCCAATTTC
CCAAAGACCACATTGAATATAAAAACTCTAAACGGAGAAGAAGTCACCAG
TGCTAAAGTAGTTGAAGGTCTTCAAGTATGTGGTGTGGATCAACCAGAAA
AATGGATAAACCTCCCAAAGACCTACAGTCGAAAGGATTTTTCGGTGAGC
GACAAACGACAACCAATCACCAAAGAGCTGCTCCAACGATGGCCACACCT
CCATCCTTTAAAGACCAAACTGTCCGAGACTGGCGACAATCATCCAATGA
AGGTTGGCATCCTAATTGGTGCAAACTGCCCCAAAGCAATTCAGCCCACG
AACGTAATCCCAAGTCCAGTTGAGAGAGGACCCTATGCCTTCGAGACAAA
CCTAGGGTGGTGCATAGCAGGTCCACTTGACAACACCAAACCAAACATCA
CGTCATGTTATCGTATCAACTTCGACTTGAAATCAGAACGAAAACCAACC
CATAGATTCGTGAAACAAGAGCAGGTGGCTGACCATTCGATCGAAAAAAT
GATTGGATCAGTCTATGGTGAAGAGCAAACAGTCAACGACAAATCATTAG
GTGACGAGTTCTCCCAAGACGACGTCAAGTTCCTGAGCATCATGAACACC
AACTGTCAAAAGGTAAGTGGACATTACGTTCTTCCCTTACCTTTTCGCAA
TGATAAAGTCAATTTGCCTAACAACAAATCACTTGCTTTGAAGAGGCTTA
ATCTATTAAAGAAGAAATTTTCTCGAGATATGCAAAGTGCCCCTGAGCTG
ACCATCGATACCTTCTACGGTGATCCAATGGAGTTCGAGTACTTTATGTC
TACCTTCGAGGAAGTCATTGAAACAAAGATCGACGAAGACAGAAGGCGTC
TGGCCAGTCTTATCCAATTCACTGGGGGCGAAGCAAAGGACCTCATCAAA
GGATGCAGCCTTCTTCGTCCAACAGAAGGATACCAGTCTGCAAAGACCTT
GTTACGAAAAAGATATGGTGACCCATACAGAATACTGGCGTCGTATCGTA
AAGAAGTACAAGAACTAACACCAATCAAGAACGCTGACGCTGCATCACTC
CGAACTCTCTACTCTTTCCTGGTTAAAAGCAAGTTTATCATCGGCAACAA
GTTCGACACCCCCGACAACATTTGTCTTGTACTGACAAAACTTCCTATCA
GTATGAGGGACCGCTGGAATCGCTACGTATATCAAATTCGAACTTCCTTC
CATCGTGAACCAAAATTCGACGACTTAATCGACTTCGTAGATAAAGAGAC
TGTGTTGGCCAACGATCCATTGTATTCAAGGGAAGCGATGCACGGCGATA
CTGACAACAATGCATCAAACCGTAAAACTGTAAGAACCTTTAATACTGAT
TTCTCAAAATGTCCATTTTGTGAAGAGGGTCACGATCTAGACAATTGTCC
AGAGTTTAAGAAAGTAGACTGTAAAGAGAAAGGGAAATGGGCATTGAAGA
GTGGTCGTTGTTTTTCATGCCTTAAACGAGGGCACTTGGCTAAAGAGTGT
AAAGCGCCAAGAAAATGTGAAGAGTGTGGTGGCAAGCATCCAACATCATT
TCATGGCTATAGAAAGGGTCTTTTCAAAACGGAAGCTACTAGTCCTGAAA
AGCCATCAGAATCTTTAGAAATTCACGTAATTAGAAACAATGACTTTGTT
AGTATGTGCATCGTACCAGTTTTTATCAAATTAAATCAGAATCGTGTGTT
AACCTATGCTCTGCTTGATAATTGTAGTCAGGGAACATTCATCGATAACG
ACTTGTTGTCACAACTTGGATCCAATTTCCCAAAGACCACATTGAATATA
AAAACTCTAAACGGAGAAGAAGTCACCAGTGCTAAAGTAGTTGAAGGTCT
TCAAGTATGTGGTGTGGATCAACCAGAAAAATGGATAAACCTCCCAAAGA
CCTACAGTCGAAAGGATTTTTCGGTGAGCGACAAACGACAACCAATCACC
AAAGAGCTGCTCCAACGATGGCCACACCTCCATCCTTTAAAGACCAAACT
GTCCGAGACTGGCGACAATCATCCAATGAAGGTTGGCATCCTAATTGGTG
CAAACTGCCCCAAAGCAATTCAGCCCACGAACGTAATCCCAAGTCCAGTT
GAGAGAGGACCCTATGCCTTCGAGACAAACCTAGGGTGGTGCATAGCAGG
TCCACTTGACAACACCAAACCAAACATCACGTCATGTTATCGTATCAACT
TCGACTTGAAATCAGAACGAAAACCAACCCATAGATTCGTGAAACAAGAG
CAGGTGGCTGACCATTCGATCGAAAAAATGATTGGATCAGTCTATGGTGA
AGAGCAAACAGTCAACGACAAATCATTAGGTGACGAGTTCTCCCAAGACG
ACGTCAAGTTCCTGAGCATCATGAACACCAACTGTCAAAAGGTAAGTGGA
CATTACGTTCTTCCCTTACCTTTTCGCAATGATAAAGTCAATTTGCCTAA
CAACAAATCACTTGCTTTGAAGAGGCTTAATCTATTAAAGAAGAAATTTT
CTCGAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:502712..504490 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1779:1780 |
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