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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:190796..193922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018210 ID=XLOC_018210|Name=XLOC_018210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3127bp|location=Sequence derived from alignment at sc0000023_pilon:190796..193922- (Clytia hemisphaerica_ch_hm2_pilon)
CTTATTGATTTAACTTCGACCACGTAGGTTTATCATTGGTTGTCCTACCC
TAAATTTTGCGGTTTAAGTTGATTCCTGCAAAATTTTCCGGGAATTTTCC
AGATGCAAAAAAATGTATTTATTTTTTAGAACTGCAACGTCAAGATCCAA
TGTTACTCAAGCTACTGTTCTTCGTGATTCCTCGTCAACACAAACTGCGT
AAGTTTTCCAAAATAAAAAGGAGCCTGAAAAAATAGAGCCATTTCTTTGC
CAAAAATTACTTAAGTATAGAGGTTTTGGGCTTTATACAATATTGCTTCA
TTTTGTTTGCCTTCTTACACAAGAGTTCAATAGAAAGTGCTAAATTTTGT
ACAAAAACCACTAAACATTTTAGTCATTAGGATCCAACAATTTAATCATA
ACTAATTGCTTTTTTTAGAACTTCAACAAGATCAAGATCCAATGTTACTC
AAGCTACTGTTCTTCGTGATTCCTCGCCAACACAAACTGTGTAAGTTTTC
CAAAATAAAAAGGAGCCTGAAAAAATGGGGCCATTTCTTTGCCAAAAATT
ACTTGAGTATAGAGGTTTTGGGCTTTATACAATATTGCTTCATTTTGTTT
GCCTTCTTACACAAGAGTTCAATAGAAAGTGCTAAATTTTGTACAAAAAC
CACTAAACATTTTAGTCATTAGGATCCAACAATTTAATCATAACTAATTG
CTTTTTTTAGAACTTCAACAAGATCAAGATCAAATGTTACTCAAGCTATT
GTTCTTCGTGATTCCTCGTCAACACAAATTGCGTAAGTTTATGAAATTCA
CTGTTGCAATAATTTTCATGGTAAAGGAGAATGACGACAGCTGTCATTTA
ATACCCCTTCCCCGTCAAAGAAAACAAAAATGCACTGACATAAGATTTGA
TTTTTCTTTCAGTTCAATGGCTGCTGATACTGATGATGACATAACCTCCG
GACTTGCAGACTCAGTGTCCAAATACAACATTATGTAAGTTTAGATGTTT
TGATAGAGCTTTGGATCGGAATTAAGTTCTCAATTTTAACTCCTCCTATC
ATAAATCACTCGCCTTTTTGTTACATTATTTTCATAAAAAAGTCAATAAT
TTTGCATCATACATTTTGACACAAACAGACCCCCCCTCCTTATTATTTTT
TGGGAAAATGTTTTTGAAAGTTCCCTTTTTTGTCCCAATTCTACTGTATT
AGCCTTGCTTAAAAAACTTTTCCACCAGGGCATTTTTATTCAAACTCCAC
CCCCCCCCCGCTTATTAACTTTTGAGATTTTTTCCACCCTACCTCGCTTA
TTCCAAACCCTCCCCCTTCGGCTATTACGTGTACCCGAGATTACCATGAA
AACACTTCCATGAACCCATTTCCATCGCATTAATTAAATTGTACTTTTTA
TTTTGCTTCCTTTATCATTCAGCTGAATTACCACTTCAAGTATAAATATA
TTGTTTTTATCGTTATTGTTTTTTTAGGAAACCAGCCATCGAGAATTGGT
CAACGTGTAGAATATGTACCGGAATCATCGGCAGTTCTCCAGCTCATATG
ATGTCCTGTAAGTGCAGGTATCATCATATTTGTATCGAAGAATTAACAAA
AAATAGTAACAATTGTCCTACGTGCAACACAATATCAACTAATGCTGTAC
AGTTGGAATCGTATAAAGACATCATCCAGATATGGTTCTGTAAATTTTCT
GACAGCGTCAATATAGACTTAACAGAAAGATCTGATCTGTCTGTTAGAAG
GTCTAAGCTTTACATTGACACCCTAAAAAAGCTTCCGAGAATCATGAAGA
AGGGAATTGTTCCATTATACGTCATATTCGCCGATGAAGACGGTGGTGAT
CAAGGTGGCCCGACAAGAGAATTCTTTACTGAGGTTTTTGACCTTTTCGT
TGGAAAATTGGTGCACGGTGAAAATAGAAAATACACCTTCATACACGACT
TAGTGAGACTCAACAATAATGAATACAAGTACTTTGGATTTCTTACTGCT
CTGGCCCTGGTGCATGGTTGTGTGGGACCAAGATTTTTTTGCGAATCCAT
AACCAATTTCATCTTTACCGAAACAGCTGAACCGAAAGTGGAAGAGATAC
CCGATGCTGACATCAAAGAAAAGCTAAAGGTCCTACAAAATTGCGAAGAT
GAGGAAGCATTCAAAAATATTATGATGGATCTTAGTGATTCTCGATTTGA
TTCTGGATTTGTTGCTGCAAATGTATCTTTTAAAGAGAAAGATGAACTGA
TAAAGACATTATCTTATCACCACGTCATTTCCCATTGCCATCAGGAGTTG
AGACAATTCATGGCTGGATTGGAAATTGGGGACGTCCTTACAACGTTGAA
ATGTCATATCATGTTTAAAAAGGAGTTTGAGTATGATGAAACGCTTATCA
CCGCTGATCGTGTGAAAAGAATTTTCAAGGTACGTATCTCATAGTAGGCA
ACATTCCTCCAACCCCACCTGAAAAAAGTCACACCACCTTTTAAAGCTTT
GCCACCATCTGAAAGATGCGCAATACTCAACCCCCACCTTCTTATGCCTA
CCCCATTTGAATTTTACGAACAACAAGTTTCTCCATTTATTTTAGCCAAA
TTGTTAGGTTGAATATCCTTTAAGCTCTATTACTTGGATTTTCATTAATT
CAATGGTGATTATTTTTGACAGATTTGAATTTGACTCCACTTAATATGAA
GAAAACTCGCTAATGCTCCAACCCCCATCTAACCCCAAGTCACCCTTCTT
GTACAACGTTACCCTAAACTTTATTTTTATTTTTATTTTTTTTCTTCAAT
TTTTGCACCATGCTGGAAACATTGGAGGACTCTCCTCGGGAGGTTGAAAT
ACAAGACATGCCAAATGAAAAGATTACCATCACGACGATCGGTTTGTCCG
ATGTGTTGCAATACATCACAGGATCAAAGTACCTCCCCTTGTACAATGAG
GTCAGTTATTTGATCAAAATCATTCCATGTAAAGACGAAGGAAGGCGCAG
TTTTGCTTACAGTTGTAGCTGTGAAGTGACCATTCCCGCAACTGAAAGAT
ATGTCGACGAAGAAAATTTTATTGCTAACTTTTTAGAAGACATGGTGATG
AACTCGAAAGCATTTTCTCTCGCCTAA Coding sequence (CDS) from alignment at sc0000023_pilon:190796..193922- >XLOC_018210 ID=XLOC_018210|Name=XLOC_018210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3158bp|location=Sequence derived from alignment at sc0000023_pilon:190796..193922- (Clytia hemisphaerica_ch_hm2_pilon)
CTTATTGATTTAACTTCGACCACCTTATTGATTTAACTTCGACCACAACT
GCAACGTCAAGATCCAATGTTACTCAAGCTACTGTTCTTCGTGATTCCTC
GTCAACACAAACTGCAACTGCAACGTCAAGATCCAATGTTACTCAAGCTA
CTGTTCTTCGTGATTCCTCGTCAACACAAACTGCAACTTCAACAAGATCA
AGATCAAATGTTACTCAAGCTATTGTTCTTCGTGATTCCTCGTCAACACA
AATTGCAACTTCAACAAGATCAAGATCAAATGTTACTCAAGCTATTGTTC
TTCGTGATTCCTCGTCAACACAAATTGCTTCAATGGCTGCTGATACTGAT
GATGACATAACCTCCGGACTTGCAGACTCAGTGTCCAAATACAACATTAT
TTCAATGGCTGCTGATACTGATGATGACATAACCTCCGGACTTGCAGACT
CAGTGTCCAAATACAACATTATGAAACCAGCCATCGAGAATTGGTCAACG
TGTAGAATATGTACCGGAATCATCGGCAGTTCTCCAGCTCATATGATGTC
CTGTAAGTGCAGGTATCATCATATTTGTATCGAAGAATTAACAAAAAATA
GTAACAATTGTCCTACGTGCAACACAATATCAACTAATGCTGTACAGTTG
GAATCGTATAAAGACATCATCCAGATATGGTTCTGTAAATTTTCTGACAG
CGTCAATATAGACTTAACAGAAAGATCTGATCTGTCTGTTAGAAGGTCTA
AGCTTTACATTGACACCCTAAAAAAGCTTCCGAGAATCATGAAGAAGGGA
ATTGTTCCATTATACGTCATATTCGCCGATGAAGACGGTGGTGATCAAGG
TGGCCCGACAAGAGAATTCTTTACTGAGGTTTTTGACCTTTTCGTTGGAA
AATTGGTGCACGGTGAAAATAGAAAATACACCTTCATACACGACTTAGTG
AGACTCAACAATAATGAATACAAGTACTTTGGATTTCTTACTGCTCTGGC
CCTGGTGCATGGTTGTGTGGGACCAAGATTTTTTTGCGAATCCATAACCA
ATTTCATCTTTACCGAAACAGCTGAACCGAAAGTGGAAGAGATACCCGAT
GCTGACATCAAAGAAAAGCTAAAGGTCCTACAAAATTGCGAAGATGAGGA
AGCATTCAAAAATATTATGATGGATCTTAGTGATTCTCGATTTGATTCTG
GATTTGTTGCTGCAAATGTATCTTTTAAAGAGAAAGATGAACTGATAAAG
ACATTATCTTATCACCACGTCATTTCCCATTGCCATCAGGAGTTGAGACA
ATTCATGGCTGGATTGGAAATTGGGGACGTCCTTACAACGTTGAAATGTC
ATATCATGTTTAAAAAGGAGTTTGAGTATGATGAAACGCTTATCACCGCT
GATCGTGTGAAAAGAATTTTCAAGGAAACCAGCCATCGAGAATTGGTCAA
CGTGTAGAATATGTACCGGAATCATCGGCAGTTCTCCAGCTCATATGATG
TCCTGTAAGTGCAGGTATCATCATATTTGTATCGAAGAATTAACAAAAAA
TAGTAACAATTGTCCTACGTGCAACACAATATCAACTAATGCTGTACAGT
TGGAATCGTATAAAGACATCATCCAGATATGGTTCTGTAAATTTTCTGAC
AGCGTCAATATAGACTTAACAGAAAGATCTGATCTGTCTGTTAGAAGGTC
TAAGCTTTACATTGACACCCTAAAAAAGCTTCCGAGAATCATGAAGAAGG
GAATTGTTCCATTATACGTCATATTCGCCGATGAAGACGGTGGTGATCAA
GGTGGCCCGACAAGAGAATTCTTTACTGAGGTTTTTGACCTTTTCGTTGG
AAAATTGGTGCACGGTGAAAATAGAAAATACACCTTCATACACGACTTAG
TGAGACTCAACAATAATGAATACAAGTACTTTGGATTTCTTACTGCTCTG
GCCCTGGTGCATGGTTGTGTGGGACCAAGATTTTTTTGCGAATCCATAAC
CAATTTCATCTTTACCGAAACAGCTGAACCGAAAGTGGAAGAGATACCCG
ATGCTGACATCAAAGAAAAGCTAAAGGTCCTACAAAATTGCGAAGATGAG
GAAGCATTCAAAAATATTATGATGGATCTTAGTGATTCTCGATTTGATTC
TGGATTTGTTGCTGCAAATGTATCTTTTAAAGAGAAAGATGAACTGATAA
AGACATTATCTTATCACCACGTCATTTCCCATTGCCATCAGGAGTTGAGA
CAATTCATGGCTGGATTGGAAATTGGGGACGTCCTTACAACGTTGAAATG
TCATATCATGTTTAAAAAGGAGTTTGAGTATGATGAAACGCTTATCACCG
CTGATCGTGTGAAAAGAATTTTCAAGAAGTCACCCTTCTTGTACAACGTT
ACCCTAAACTTTATTTTTATTTTTATTTTTTTTCTTCAATTTTTGCACCA
TGCTGGAAACATTGGAGGACTCTCCTCGGGAGGTTGAAATACAAGACATG
CCAAATGAAAAGATTACCATCACGACGATCGGTTTGTCCGATGTGTTGCA
ATACATCACAGGATCAAAGTACCTCCCCTTGTACAATGAGGTCAGTTATT
TGATCAAAATCATTCCATGTAAAGACGAAGGAAGGCGCAGTTTTGCTTAC
AGTTGTAGCTGTGAAGTGACCATTCCCGCAACTGAAAGATATGTCGACGA
AGAAAATTTTATTGCTAACTTTTTAGAAGACATGGTGATGAACTCGAAAG
CATTTTCTCTCGCCTAAAAGTCACCCTTCTTGTACAACGTTACCCTAAAC
TTTATTTTTATTTTTATTTTTTTTCTTCAATTTTTGCACCATGCTGGAAA
CATTGGAGGACTCTCCTCGGGAGGTTGAAATACAAGACATGCCAAATGAA
AAGATTACCATCACGACGATCGGTTTGTCCGATGTGTTGCAATACATCAC
AGGATCAAAGTACCTCCCCTTGTACAATGAGGTCAGTTATTTGATCAAAA
TCATTCCATGTAAAGACGAAGGAAGGCGCAGTTTTGCTTACAGTTGTAGC
TGTGAAGTGACCATTCCCGCAACTGAAAGATATGTCGACGAAGAAAATTT
TATTGCTAACTTTTTAGAAGACATGGTGATGAACTCGAAAGCATTTTCTC
TCGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:190796..193922 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1246-1575:331 |
| Aaloc | 1189-1245:392 |
| Aaloc | 238-1188:1650 |
| Aaloc | 166-234:2215 |
| Aaloc | 94-162:2417 |
| Aaloc | 25-90:2998 |
| Aaloc | 1-21:3128 |
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