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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2399549..2404994+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018161 ID=XLOC_018161|Name=XLOC_018161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5446bp|location=Sequence derived from alignment at sc0000019_pilon:2399549..2404994+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTCAACAGCATTATAGCGCTTTTAGTTTTGGCATTTCTTCCCGA
CACTGTTTCAGGTAgaaaaGtttcttatttcttCcCGACACTGTTTCAGG
TAGAAAAGTTTCTTATTTCCTTCCCGACACTGTTTCAGGTAGAAAGTTTT
CTTATTTCTTCCCGACACTGTTTTCAGGTAAAAGTTTCTTATTTCTTCCC
GACACTGTTCAGgtagaaaagtttttatttctttctttcccGACACTGTT
TCAGGtagaaaagtttctttttacGCTGTTTTTCTTCCCGACACTGTTTC
AGGTAGAAAAGTTTCTTATTTCTTCCCGACACTGTTTCAGGTAGAAAAGT
TTCTTATTTCTTCCCGACACTGTTTCAGGTAGAAAAGTTTCTTATTTCTT
CCCGACCAATGTTTAGGTTTCAGAGAAAAGTTTCTTATTTCTTCCCGACA
CTGTTTCAGTAAAAGTTTCTTATTCTTCCCGACACGTTTCAGAAAAGTTT
CTTATTTCTTCCCGACACTGTTTCAGGTAGAAAAGTTTCTTATTTCTTCC
CGACACTGTTTCAGgtagaaaagttttttatttcttcccGACACTCTTTC
AGGTAGAAAAGTTTCTTATTTCTTCCCGACACTGTTTCAGGTAGAAAAGT
TTCTTATTTCTTGTTAGACTTCTTAGATTGCAGGCCCGGCAGAAAAACTA
TAAAAGGGGGAGGCTGAGTGCTCAAAACGAGATcaaattcgctaggaatt
taAGAAATAAGTCTCACTTGCTCAAAGTTGAGGAGGCTGAAACCACTCAG
TCTGGATTGTAAAACGTTTTCGATTCACCTCTTTAAGGAAAAGGTAGGTC
AATTAGTTACCGCGTTAGTCTCTAGTCTTTGGGACAAAGGAGCAAGGTGC
AATTATGATGACCTTTGCTAGCTCCTTTTACTTGTAACATCAGTCTTTAA
TGACAAAATTGCCTTTCCCTGTTCACGTGCACCttttttttCGAAtgatc
aagaaaaatattttcctgaaatgggctcttcgagaaaaaaaatttacatg
gggggtgaaggatatattgtccgggggtagcaaaaatcatcaaaatttgc
cttgtccggggtgtAATTTGGtgtgtccggggggtcagcagatgcttgtc
cggggggtaaaacttattgtccggggggtaaatcactaaaaattgttata
tcctccaccccccatgtaaaattttattctggaagagcccaatttgcTCC
TTACTTTGTAGCTTAGCAAAGatctctctctttttctctGACAACAGGAG
TTTGTCAAGACAAGGTCGGAGAATGTGCGAAGTATATGAAAACGGGATGG
TATACGTGCTGGGTTGGAAGTTATATGTATGATTACTGCCCAAGAACTTG
TGGTTTCTGCGATAAAGGTGAGTTTGGAAAACTATATCTTTAGTAGATCT
CTTTATAAAttacatcacttgcctcgtatccaaacaattaccatggtgat
gaTGTCTCTTGaaacattaaattatttttttatgaagtaGGTTTTAATAA
ATTTCACTGGGAGTTACTTTAGGCgtaaaaactttcgcgagcagaaactt
tcgcgaatttcgcgaattttggtaCTTTTTGCGAATgcaaatgtctttaa
aaattctatgaAGGGCCATTCgggaaagtttatgctcgcgaaaaattctt
gacaaaataaaaaatctgtaaaacttcaaactttgaataaaatgtaactt
ttatgacactttttagcctgctaaaagaccaATAAGTCCAagaacaaatg
tttcaagccaatccaagaagtatttgtccctctaagccattttttcatgt
gaaaattctcaattttacgtcttgatttgcaaaagtttatgcttgcgaaa
aatattttcccgttaaattcgcaaaagtaaatgtcgcgatttttcgcctt
tgcgatttttcgtcctcgcgaaagtttctgctcgcgaaagtttgtacgcc
taaaggtGGATTAATGGCTACCGAGGAGTAGTGGGGAGATAAATTTGTCT
CTTTCGAAACGATATCTTTCACCCCTTACCAAAAGTACGGAATTTTGTGG
AAAAGCAAAATTGCTAATTTTGAAACCTTTCAATACTGTAATATTGTTAA
AATCCGCCCTAAGACATAACATACAGTTGAACACCCgcttttcacagacc
cactgggaacctttcccactggaaaaattggtgaaaatatcATACCAAGT
GGAAAACcatttctaatttttaattGTACCTGCTGAAAATAATCGGATAa
gaaaatcctcactgcaaagtaTTATGCTGTTTTATCATCCCCGCTGAATA
TCTTCTTGCTCGAAAAGAATGAAATTCAAACCTCAAGCCATAAAAACATG
CGAATATCATTGcttctactttaatgggataaactttcgcggggattaaa
tttcgcggatttgggtgtcatctgcgaaaatccgcgaaattaagtcccaa
tggaaatttggaagggcctcatccgcgaaatatttctaaacattttCTGA
CATCAAAGAAGCggtaataatgtgtatttcaacaaccaaaatgcacgatt
tgacagtataagtcacaaaatcgtgaatatattgccacccaatagtgcca
cccacGAAATTAATTCCCCACGAAGTTTtggaatttcgcggataggccca
accgtaaaatttaatccccgcgaaagtttatcccattaaagtagaatGAA
CTAATTACATGAAGAGCCGTGATGGGACTAAGTACGAGCATGTTTGAACC
TAAAATCATCAACAAattggtttttattttcaaggGCCAATACCGAAACC
GAAGCCAGGATGTCATGATTTCGAAAAGAATTGTGGGACATGGAAAAAGA
TGGGTTATTGTGAAAATAATGCATTGTTCATGAAAAAGTATTGCGCTAAA
ATGTGTGATATGTGCAGACCAGGTAACTTTATATTACTCTCTCCTTCTCG
CCAAAAGACGTGAATCGCTGATCAATTTCTTATTCCAACTTTTCACATCC
CTGCtgacttttttgtgaaaatattttccttttcagttCCCAATCTTACC
TAGACTGgtacgccagtcgggctggaacggtatcacgcgggaaaagtgag
cgtaggagttaggtaagcgtaggaagaaattttgtcggcggtaAGGGCTG
AAAGCTAatgttaatcagcagcctctcaccaacttttgctcgttctccta
cgcagctcctattctagcaaacgcccaccgcctttatgttcccgtcctct
gacatgattaattaacagactagtttgctagtctaaatCTTACTTGATTC
TTATACGAGGCTTCTTTAACACGctcttgttttttataagaaccagaaaa
ttttgatgaggctcggctgttcttttTGGCCACTTTGAGACtccaaattg
ttcttattttattcttatttttatagggtgaaattgaggtattttaagat
ttatacccaatttttactactttaacccctaaattgcttgaaacatCAGG
CTCAgtgttgttcttcttttttttggagattttgagTAATTACAGTACTT
TTTCAATACTTTCAGTTCCCACACAAACTCTTGGACGATGTAGCGATAAA
CATCAACATTGTGCTGACTGGGCAAAAAATGGAGAATGCAAAAAGAACCC
GAAATTCATGTTGATGAATTGTaaaaaaaGTTGCAAAGCCTGTTATCCAA
GTAAAGTCttatttaaactttttgagcttaaaaTTAGGCGACCCCAgaac
agtgccgtaggaagcattttcatattgggggctgaagtttagtgacaccg
cgagggccaaccatggtttggcccgagggggaaaatgttgctacggcact
gcagaaAGAATATCCCATGCTTGGGAGGTCGAGACCTTGTACTGAATTGA
CATTAAATAtactcaatttttcttgttctttttctGGCCGATACAAGGCC
CCTAAGTTTATAACACGTACAGACTTTATGGATTCTTGAATAAATACCAT
CCCTCCCTtactccaaaatttgaaaacttcatGGATTTTAGACCTCGTCA
ATAGAGTGCCCTTTTTTCATCCAGTTCCAACAAGAGGCAGTCTATGCAAA
GACCAACACCAGCATTGTGCTGACTGGGCGAAAAATGGGGAATGTAAGAA
AAATCCGAAATTCATGTTGGCCAGTTGCAAGAAGAGTTGTAGAGCTTGTC
TTTTAGGTAAAACTTTTTCagtaaatttagtttttaaagtTTCTGAGGCT
CTTGAAATTTCATTAAGTCAAGAGTTCACTACAGACTTTACACCCCCAGA
AGTTGGGCGTTACCGGGCGGACGTCTCGGGACACCCAAAATACTCCCGAA
CAAGAGAAACTTTGACCATATTCACTTTCCCCATTGAGCAATTATATTCC
TCACCCGGGGAGTATACAAAGTAGCCCGTTGTTCTTGTTCAAGCTAGTAT
CATTTCATCACATTTCCGTCCTGAATCCACTAGAATTCCGATTCATTCCA
TCCCAAGCTTTATAAATCGAACGGAAAAAATGTAGTTAAACGGCAACATG
ACTTGAAACATGTTCAACAAACATTTCTATAGAAACCTTCCTATTTCTAT
TTATTATATAGTGACACCAACAAGATATCCTGgcccaaccaaacatcaaa
accCGTGTCACGATGAAGACCCTTCATTCTGTGCTGCCCAAAAATCAAAT
TGCTTTTGGAACAGTGCAATCATGTCGAAGAAATGTAAATTAACATGTCG
CATGTGTTCAACGCTGGCTGATTGCTTCGATAAGAACAGCTATTGTCCTA
AATGGGCAGAATCTGGGAAGTGTAAAGTAGGCAGCCCCTACAGACCGTGG
ATGCTGGAGACTTGTGAATTCACATGTACACACTGTGGCAAGGTCCTACC
CACCACTGCTCCCCCACCACCTCAAGCATGTGCAGATGAAGATCAAGCAT
TCTGTCGACAACACAAAGGAGATTGCATCTTTAACAGCAAAGTCATGTCC
AAAAAGTGCAAGTTAACTTGTCAGATGTgttcgcaaaatttgaaatgctt
TGATCAAAACAGTTATTGTCCACAGTGGAAAAAAGAAGGTAGTTGCTTAA
AGAAAAGCCCCTATCATGTTTTTATGATGACAACATGTCCTTATACATGT
ACTAAATGTGGTACCGTACCCCTCCCTACAGAAGCACCGACCAATGCTCC
AACCAAAGCTCCTACCAGGGCACCACCCTCAAAATGCATGGATACCGACC
CTGGATTCTGTTTGGAACAGAAAGACCAATGTTTCAATAACAATGATGTC
ATGTCtacaaaatgtttcaaaacatGTAAGATGTGTTCACCATCCACTCA
TTGTTTCGATTCGGACAGCTACTGTCCGAAATGGAAGGAGCTCGGT Coding sequence (CDS) from alignment at sc0000019_pilon:2399549..2404994+ >XLOC_018161 ID=XLOC_018161|Name=XLOC_018161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000019_pilon:2399549..2404994+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTCAACAGCATTATAGCGCTTTTAGTTTTGGCATTTCTTCCCGA
CACTGTTTCAGATGCAGTTCAACAGCATTATAGCGCTTTTAGTTTTGGCA
TTTCTTCCCGACACTGTTTCAGGAGTTTGTCAAGACAAGGTCGGAGAATG
TGCGAAGTATATGAAAACGGGATGGTATACGTGCTGGGTTGGAAGTTATA
TGTATGATTACTGCCCAAGAACTTGTGGTTTCTGCGATAAAGGAGTTTGT
CAAGACAAGGTCGGAGAATGTGCGAAGTATATGAAAACGGGATGGTATAC
GTGCTGGGTTGGAAGTTATATGTATGATTACTGCCCAAGAACTTGTGGTT
TCTGCGATAAAGgGCCAATACCGAAACCGAAGCCAGGATGTCATGATTTC
GAAAAGAATTGTGGGACATGGAAAAAGATGGGTTATTGTGAAAATAATGC
ATTGTTCATGAAAAAGTATTGCGCTAAAATGTGTGATATGTGCAGACCAG
gGCCAATACCGAAACCGAAGCCAGGATGTCATGATTTCGAAAAGAATTGT
GGGACATGGAAAAAGATGGGTTATTGTGAAAATAATGCATTGTTCATGAA
AAAGTATTGCGCTAAAATGTGTGATATGTGCAGACCAGTTCCCACACAAA
CTCTTGGACGATGTAGCGATAAACATCAACATTGTGCTGACTGGGCAAAA
AATGGAGAATGCAAAAAGAACCCGAAATTCATGTTGATGAATTGTaaaaa
aaGTTGCAAAGCCTGTTATCCAATTCCCACACAAACTCTTGGACGATGTA
GCGATAAACATCAACATTGTGCTGACTGGGCAAAAAATGGAGAATGCAAA
AAGAACCCGAAATTCATGTTGATGAATTGTaaaaaaaGTTGCAAAGCCTG
TTATCCAATTCCAACAAGAGGCAGTCTATGCAAAGACCAACACCAGCATT
GTGCTGACTGGGCGAAAAATGGGGAATGTAAGAAAAATCCGAAATTCATG
TTGGCCAGTTGCAAGAAGAGTTGTAGAGCTTGTCTTTTAGTTCCAACAAG
AGGCAGTCTATGCAAAGACCAACACCAGCATTGTGCTGACTGGGCGAAAA
ATGGGGAATGTAAGAAAAATCCGAAATTCATGTTGGCCAGTTGCAAGAAG
AGTTGTAGAGCTTGTCTTTTAGTGACACCAACAAGATATCCTGgcccaac
caaacatcaaaaccCGTGTCACGATGAAGACCCTTCATTCTGTGCTGCCC
AAAAATCAAATTGCTTTTGGAACAGTGCAATCATGTCGAAGAAATGTAAA
TTAACATGTCGCATGTGTTCAACGCTGGCTGATTGCTTCGATAAGAACAG
CTATTGTCCTAAATGGGCAGAATCTGGGAAGTGTAAAGTAGGCAGCCCCT
ACAGACCGTGGATGCTGGAGACTTGTGAATTCACATGTACACACTGTGGC
AAGGTCCTACCCACCACTGCTCCCCCACCACCTCAAGCATGTGCAGATGA
AGATCAAGCATTCTGTCGACAACACAAAGGAGATTGCATCTTTAACAGCA
AAGTCATGTCCAAAAAGTGCAAGTTAACTTGTCAGATGTgttcgcaaaat
ttgaaatgcttTGATCAAAACAGTTATTGTCCACAGTGGAAAAAAGAAGG
TAGTTGCTTAAAGAAAAGCCCCTATCATGTTTTTATGATGACAACATGTC
CTTATACATGTACTAAATGTGGTACCGTACCCCTCCCTACAGAAGCACCG
ACCAATGCTCCAACCAAAGCTCCTACCAGGGCACCACCCTCAAAATGCAT
GGATACCGACCCTGGATTCTGTTTGGAACAGAAAGACCAATGTTTCAATA
ACAATGATGTCATGTCtacaaaatgtttcaaaacatGTAAGATGTGTTCA
CCATCCACTCATTGTTTCGATTCGGACAGCTACTGTCCGAAATGGAAGGA
GCTCGGTTGACACCAACAAGATATCCTGgcccaaccaaacatcaaaaccC
GTGTCACGATGAAGACCCTTCATTCTGTGCTGCCCAAAAATCAAATTGCT
TTTGGAACAGTGCAATCATGTCGAAGAAATGTAAATTAACATGTCGCATG
TGTTCAACGCTGGCTGATTGCTTCGATAAGAACAGCTATTGTCCTAAATG
GGCAGAATCTGGGAAGTGTAAAGTAGGCAGCCCCTACAGACCGTGGATGC
TGGAGACTTGTGAATTCACATGTACACACTGTGGCAAGGTCCTACCCACC
ACTGCTCCCCCACCACCTCAAGCATGTGCAGATGAAGATCAAGCATTCTG
TCGACAACACAAAGGAGATTGCATCTTTAACAGCAAAGTCATGTCCAAAA
AGTGCAAGTTAACTTGTCAGATGTgttcgcaaaatttgaaatgcttTGAT
CAAAACAGTTATTGTCCACAGTGGAAAAAAGAAGGTAGTTGCTTAAAGAA
AAGCCCCTATCATGTTTTTATGATGACAACATGTCCTTATACATGTACTA
AATGTGGTACCGTACCCCTCCCTACAGAAGCACCGACCAATGCTCCAACC
AAAGCTCCTACCAGGGCACCACCCTCAAAATGCATGGATACCGACCCTGG
ATTCTGTTTGGAACAGAAAGACCAATGTTTCAATAACAATGATGTCATGT
CtacaaaatgtttcaaaacatGTAAGATGTGTTCACCATCCACTCATTGT
TTCGATTCGGACAGCTACTGTCCGAAATGGAAGGAGCTCGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2399549..2404994 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-1371:4664 |
| Aaloc | 457-585:4127 |
| Aaloc | 322-453:3618 |
| Aaloc | 184-318:2837 |
| Aaloc | 64-180:1300 |
| Aaloc | 1-60:1 |
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