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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000402_pilon:24219..26849- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018093 ID=XLOC_018093|Name=XLOC_018093|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2631bp|location=Sequence derived from alignment at sc0000402_pilon:24219..26849- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAAAATGGCTAACAAAAAAGGTAAGTTGGGTAAAATAACTGGCTTTGA
AAGAAATTTGGATATTTTACGGTTACTAATTATGAAGGTTCTTATATGAT
AGTCCATTTCTTTCTTAAGATGTTACTCACCATAGTTTCTGGGGGGGGGG
GTCTTGGGTTTCGATGAACCAAAAGCAAGGGGGGTGTTAAAAGTATGACT
TTCCTAAGGGGGTTGCCAGTTAAGGGGGGGGGGGTCTTCTTACCTAAGAC
CCCCCCCCCCCGTCTTCATAGATAAGGGGATCTTCCTTGAATTATGCGAA
ATTTCAATTTTTTCATTTATACTAATTTTTTCACTTAGTCGGAATAAAAA
TAAAGAAATCGACTGAAACTAGATGGTGATCGATCTTTCCATATTTTTCA
AGGGATTTAAATACCATTGTTTTCAAGTCAGAAATATAGCACAATATTTT
GTAATGAGGATTTGTTTATTTGATTATTTTCAGCGGGGACAAAAATTGAA
GAATAATTTTCCACGGGGACGATATTTTTGCCCATTTTTCTAGTGGGAGG
TGGTCTCAATCACAGATTTCTGTAAAGCCCGAAGGGCTAAATGTCGTGCT
TTAAGCCATCGCAGGCAAAAAAAGAGAAAGTCGCAAAAATATTGTTGCTA
GTATTTTCGAAAACCCACGAATCTTTTGATTGGTCAAGCGCTGAAACCCT
ATTGTAATGTCACGTGGCCTAGGCAGGAGTTCCTACCTAATACAGTACAC
TTTTCAGCCAAAACACGAAATCTAGCCCTTCGGGCTTTATAAATCTATGG
TCTCATCGGGTCTCTGAGAAGGGGGTGTTTAACTGATAATGATGTCTTTA
ATATTTTTTTCAGTTGAATAGTAAGGTAACGAAATTAAGGTACAAATAAA
AGTTTACTGTTGACTCTTGCTAATTCGAACTCGAAGGGGGGATCTTATTT
GTTCGAATAACAGAGAGATTTGTATTAAAGACAGTAATTTAACAGGGTTT
TGCCCTGACGGGAGCTGAGAATAAGTTCGAATAATAGAAGTGTTAATACG
CGAGAGTTGACTGTCCCGCCTAGACTTCTAAACTAGTTTGATTCAGTCAC
TAGGATAAATCTGATGATAAGTTGTGACTGAATAACAGTATTCAAAGGCA
AAATTAAAACCCGCAAATTTAAAAAGTCTTTAAAGCGCCGAAAACGCTAT
AATATTGTCTATGCCATGTGTCTTAGCCTTGTGAATACGGGCTTACTCTC
GGGTACCTAATAGCCGTCCCCCCGCTAATTAATTTTTCGAAAATTTTCCA
CCCAGGACATTTTATTACAACGCCCCCACCCCCGCTTATCAAGTTTTGAG
ATTCTTTCCAACCCCCCCGGCTATTAGGTACCCGAAAGTAGTCAACTAGG
TTATTGACTGTTTATATTTTGACTTATAGGACTGCTGATCGCGACTCTTA
TCATACTCATCATTGTCGTTGCCGTAACTTTAGCTCTTGTCTTCACATTG
AAGAAAGATGTTGACAACAAGAGCTTACCAACAAGTTCCTTTAAAGTCGT
ACAAACAAAGCAAGGTGGAATGGAAGGGAAAATCATCAAAGTAACCAGAG
ATGACGGCGAAACAGAGAATGTGTATCGATTTCGGAATGTCCCGTATGCT
GAACCACCTATCAGAGATTTAAGATGGAAAGCTCCTAAACCAATACAAAC
ACAAAGTAAAACATTGAAATATAGTGATCAACAGATCTGGTGCGCTCAGA
TTAAACCCCCCAATAATATCCTCAATATAACTGAAGATTGTCTTATATTG
ACTATCAGGCAACCGGAATCTGCAACTCCTGATCAACCGCTACCAGTGCT
TTTCTGGATTCACGGTGGCGCATTAGCTAGAGGATCCAGCGATTGGTACT
ATCCTGATGAACAAACTTCAGCATCTCTCGGTATGGTTACTGTCTCCGTA
AACTATCGATTAGGAATCTTCGGTTTTTTATCTATCAAAGAGTTATGGTC
AACCAATGATGGCGAGGAAGGACAATATGGCAATTTTGGGATCCTGGATA
TGATCGAAGCATTGAAATGGGTTAAAATGAATATCAAATCTTTTGGTGGT
GATCCTAACAAAGTGACAATCCTTGGTGAATCTGGCGGTGGTGCTGCAGT
GTTTTCATTAATAACATCACCGCTAACGGATGGTCTTTTTAATAAAGCTA
TTGCAGCAAGTGGTTATCCAGTATCTTTAGAAACGACTTTTGAAAGAGCT
GATTCGAGATATGGTTCCAGTTTCAAAGAGGATTTACGATGTTCAAACGG
GAATGATGGAGATGTAATGACCTGTCTTCGTGAGAAAACAATGACCAGTA
TTCTTGACAAGGATCCTTCAATGATGAGACCCTTAAATGAATCCTCCTGG
GTATTCCCCTTCAATCAAAGACTCAACGATTACCCCATTCGCGTCATTGA
TGATGAAATCATCGATACTCCTTTGGGTTCACCAGGGAAATATCTCCAAA
AAGGATTGAAAGTTCTTATAGGAAATACTGCTGCGGAGTTACCCCCACAA
AATGCAACTAAAACAATCCAAGGACTTGAGGAGTTTCTAAAACCAAGGAT
TCTAAGTTTCACCAATATGGATACTTATGAG Coding sequence (CDS) from alignment at sc0000402_pilon:24219..26849- >XLOC_018093 ID=XLOC_018093|Name=XLOC_018093|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000402_pilon:24219..26849- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAAAATGGCTAACAAAAAAGAGGAAAATGGCTAACAAAAAAGGACTGC
TGATCGCGACTCTTATCATACTCATCATTGTCGTTGCCGTAACTTTAGCT
CTTGTCTTCACATTGAAGAAAGATGTTGACAACAAGAGCTTACCAACAAG
TTCCTTTAAAGTCGTACAAACAAAGCAAGGTGGAATGGAAGGGAAAATCA
TCAAAGTAACCAGAGATGACGGCGAAACAGAGAATGTGTATCGATTTCGG
AATGTCCCGTATGCTGAACCACCTATCAGAGATTTAAGATGGAAAGCTCC
TAAACCAATACAAACACAAAGTAAAACATTGAAATATAGTGATCAACAGA
TCTGGTGCGCTCAGATTAAACCCCCCAATAATATCCTCAATATAACTGAA
GATTGTCTTATATTGACTATCAGGCAACCGGAATCTGCAACTCCTGATCA
ACCGCTACCAGTGCTTTTCTGGATTCACGGTGGCGCATTAGCTAGAGGAT
CCAGCGATTGGTACTATCCTGATGAACAAACTTCAGCATCTCTCGGTATG
GTTACTGTCTCCGTAAACTATCGATTAGGAATCTTCGGTTTTTTATCTAT
CAAAGAGTTATGGTCAACCAATGATGGCGAGGAAGGACAATATGGCAATT
TTGGGATCCTGGATATGATCGAAGCATTGAAATGGGTTAAAATGAATATC
AAATCTTTTGGTGGTGATCCTAACAAAGTGACAATCCTTGGTGAATCTGG
CGGTGGTGCTGCAGTGTTTTCATTAATAACATCACCGCTAACGGATGGTC
TTTTTAATAAAGCTATTGCAGCAAGTGGTTATCCAGTATCTTTAGAAACG
ACTTTTGAAAGAGCTGATTCGAGATATGGTTCCAGTTTCAAAGAGGATTT
ACGATGTTCAAACGGGAATGATGGAGATGTAATGACCTGTCTTCGTGAGA
AAACAATGACCAGTATTCTTGACAAGGATCCTTCAATGATGAGACCCTTA
AATGAATCCTCCTGGGTATTCCCCTTCAATCAAAGACTCAACGATTACCC
CATTCGCGTCATTGATGATGAAATCATCGATACTCCTTTGGGTTCACCAG
GGAAATATCTCCAAAAAGGATTGAAAGTTCTTATAGGAAATACTGCTGCG
GAGTTACCCCCACAAAATGCAACTAAAACAATCCAAGGACTTGAGGAGTT
TCTAAAACCAAGGATTCTAAGTTTCACCAATATGGATACTTATGAGGACT
GCTGATCGCGACTCTTATCATACTCATCATTGTCGTTGCCGTAACTTTAG
CTCTTGTCTTCACATTGAAGAAAGATGTTGACAACAAGAGCTTACCAACA
AGTTCCTTTAAAGTCGTACAAACAAAGCAAGGTGGAATGGAAGGGAAAAT
CATCAAAGTAACCAGAGATGACGGCGAAACAGAGAATGTGTATCGATTTC
GGAATGTCCCGTATGCTGAACCACCTATCAGAGATTTAAGATGGAAAGCT
CCTAAACCAATACAAACACAAAGTAAAACATTGAAATATAGTGATCAACA
GATCTGGTGCGCTCAGATTAAACCCCCCAATAATATCCTCAATATAACTG
AAGATTGTCTTATATTGACTATCAGGCAACCGGAATCTGCAACTCCTGAT
CAACCGCTACCAGTGCTTTTCTGGATTCACGGTGGCGCATTAGCTAGAGG
ATCCAGCGATTGGTACTATCCTGATGAACAAACTTCAGCATCTCTCGGTA
TGGTTACTGTCTCCGTAAACTATCGATTAGGAATCTTCGGTTTTTTATCT
ATCAAAGAGTTATGGTCAACCAATGATGGCGAGGAAGGACAATATGGCAA
TTTTGGGATCCTGGATATGATCGAAGCATTGAAATGGGTTAAAATGAATA
TCAAATCTTTTGGTGGTGATCCTAACAAAGTGACAATCCTTGGTGAATCT
GGCGGTGGTGCTGCAGTGTTTTCATTAATAACATCACCGCTAACGGATGG
TCTTTTTAATAAAGCTATTGCAGCAAGTGGTTATCCAGTATCTTTAGAAA
CGACTTTTGAAAGAGCTGATTCGAGATATGGTTCCAGTTTCAAAGAGGAT
TTACGATGTTCAAACGGGAATGATGGAGATGTAATGACCTGTCTTCGTGA
GAAAACAATGACCAGTATTCTTGACAAGGATCCTTCAATGATGAGACCCT
TAAATGAATCCTCCTGGGTATTCCCCTTCAATCAAAGACTCAACGATTAC
CCCATTCGCGTCATTGATGATGAAATCATCGATACTCCTTTGGGTTCACC
AGGGAAATATCTCCAAAAAGGATTGAAAGTTCTTATAGGAAATACTGCTG
CGGAGTTACCCCCACAAAATGCAACTAAAACAATCCAAGGACTTGAGGAG
TTTCTAAAACCAAGGATTCTAAGTTTCACCAATATGGATACTTATGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000402_pilon | genome | sc0000402_pilon:24219..26849 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 25-1224:1201 |
| Aaloc | 1-21:2632 |
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