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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:305109..307256- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018062 ID=XLOC_018062|Name=XLOC_018062|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2148bp|location=Sequence derived from alignment at sc0000078_pilon:305109..307256- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAATCACATTGTGGTGGATTTTGGTGATAATGTTACATCAATCTT
TTATTGGTATTATGTTGACTCTCTTCAAAAATTGAAAAACAGCATCGAAA
AGCGATTCAAAATTCAACTTGAAGACCAAACTTTCAAACATGGAGATATC
GTTGTTGATGAAAACTCTTTTGGGGAACTTTATAAAAATCGGTTCACAGA
AGATATTGATTTGAAAGTTCTTTCTTCGGACATTTCATTGATTCGGAATG
AACGAAAACGAGTTTCAATGAATGAGGAACCTTCAGGTCGAGTTGATATT
CCATGGCTTGACCTTGAAGATCGTGAATTCGTAACAGGAGGGGACAGCGA
AAAAACTATATCAAATCTGAGGCAGGAGTTTCAGAAAATGATTCATAAGC
CAAGACTAGACAATGTTGTATTTTTGCTGGATGATCGCATCGTGTTGAAT
GAAGACCAATTAATAGCTGATTTGCTTCTCGATCGTGAATACTTGACCTT
AGGTGTTATAGAGAAGTATTATGAATTAGACCGTGAAGGAATGGGTTTAG
GGCGTGGTTTGAATATTCTACCACGTGTTTATATAATTATTCCACAGATT
GACGTTGGGACTAATACTGTTGAGTATCCTCTATTAGACGTTCGTCACAT
CAGTTTATCTACCATGAAATCTTGGATTGAAAGTATCCATCAAATTCCCT
GCCAAGAACAAGAGTTGGTATGCAATGGGAAGGTGGTTTCAAGTGAAAAC
TTCCCTGGTAAAATGTATTACCATCCACCCGAGCCTAAAATTGTCAAATT
GCACGTCTGTCCAACGCAAGATGAGAAGTTGAACTATTTTTACCTTCAGA
ATAATATAAGAACAATGCCAACAGTCCATTTAACCAGTTTTGATAATGAA
CGTGAATGGAAATACTTTTATCGTGGAGTAAAGGGAAAGAATGTCAACGA
GTTCATCGAGGATTCTTTACAAATACCACAAACAAAACAATATCTATTTA
TCAACAACAGGAGAGTCTCTCACAATGAACTGGCAAAACTGTTGAGGGAA
TATGGACACAATGTTTTAGCTCCGTTCAAAGTTAATCTTATCGTGCAAGC
GGACGATGGGGCAAAGGGGTTGCTATGGACATTGGAGCTATATGGTATTC
GTCGAATGCGCTCCGTTGTTGTGAAACATCCGGAAACCGCTGCTATTCTT
TTCGATATCTCTTTATCCAAATTCAACGAAAGACAACCACTTGTCGATGT
TATTTCTAAACGTTGCCCAAATCTATCGGCAGATTGTGTAAGTCTTTTCC
ACAAGCAGGAAAAACTGGATGATGCATTTTTTGTGAAGGATATGTTCGCT
TTGATGTTTAGTGACGGTTCAATTGAGGAGAATTTCGTCGTCACACTTGC
TGTTAAACCTAATATCAGAGAGGATATGAAAGAATTTTGCGAGAAAAACG
CAATCAAATACTTGGGAAACATCAATATTAATTTTCTGACTGGACAGTTC
TCCATCGATCTTTCTTTGATCACGGCGCGAACGATCAAAGATTTGAAAAA
TCAGATTTATAAAGTCAAACGGACGCCTCCTCATTTGCAAATGATTTTCT
ATCAAAACGCCGAATTGTCAGACTCGAATCAACTCACTTCACATAGCTAC
AATCAAGAATCACTCACTTTCAATATGGTTGTTAAACCAGGCAAAGAAAT
AGAACTTTTCATCAATTGTGTTTTTCTTGACGGTTTGCACATGGACCTTA
AAGTGTGCGAAACAGACACCATTGGTGACCTCAAAGAAATGGTCAGTCAG
AGGTCAGGGATCCCCTCTTCTTTGATGGTCGCTGGTAGCTATCTAGGTGA
ACCTGATCATGTACAGATCTGGGAGACTGGGTTCCAATATGTCTTCCCTG
TCGACTTTAACAAGAAAGTTTTACTGCTAATCAAACGAAAAGGTAAAGAA
GTTCAACGTAAAAGCCACCTAATTCGATATTACGATTATGACACTATCGA
AACACTTTGTGAGGACGTTCAACGAGAATTGGAAGGGGAAGGTCACGTGA
CTATGGAGAAGAACGGGTTCAATAGAGACACATTATTGAAAGATGTTGGA
GAAAAAGAAATCACTTTTTTGGTCAATAAAAACTGCTCACTCATGTAA Coding sequence (CDS) from alignment at sc0000078_pilon:305109..307256- >XLOC_018062 ID=XLOC_018062|Name=XLOC_018062|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4296bp|location=Sequence derived from alignment at sc0000078_pilon:305109..307256- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAATCACATTGTGGTGGATTTTGGTGATAATGTTACATCAATCTT
TTATTGGTATTATGTTGACTCTCTTCAAAAATTGAAAAACAGCATCGAAA
AGCGATTCAAAATTCAACTTGAAGACCAAACTTTCAAACATGGAGATATC
GTTGTTGATGAAAACTCTTTTGGGGAACTTTATAAAAATCGGTTCACAGA
AGATATTGATTTGAAAGTTCTTTCTTCGGACATTTCATTGATTCGGAATG
AACGAAAACGAGTTTCAATGAATGAGGAACCTTCAGGTCGAGTTGATATT
CCATGGCTTGACCTTGAAGATCGTGAATTCGTAACAGGAGGGGACAGCGA
AAAAACTATATCAAATCTGAGGCAGGAGTTTCAGAAAATGATTCATAAGC
CAAGACTAGACAATGTTGTATTTTTGCTGGATGATCGCATCGTGTTGAAT
GAAGACCAATTAATAGCTGATTTGCTTCTCGATCGTGAATACTTGACCTT
AGGTGTTATAGAGAAGTATTATGAATTAGACCGTGAAGGAATGGGTTTAG
GGCGTGGTTTGAATATTCTACCACGTGTTTATATAATTATTCCACAGATT
GACGTTGGGACTAATACTGTTGAGTATCCTCTATTAGACGTTCGTCACAT
CAGTTTATCTACCATGAAATCTTGGATTGAAAGTATCCATCAAATTCCCT
GCCAAGAACAAGAGTTGGTATGCAATGGGAAGGTGGTTTCAAGTGAAAAC
TTCCCTGGTAAAATGTATTACCATCCACCCGAGCCTAAAATTGTCAAATT
GCACGTCTGTCCAACGCAAGATGAGAAGTTGAACTATTTTTACCTTCAGA
ATAATATAAGAACAATGCCAACAGTCCATTTAACCAGTTTTGATAATGAA
CGTGAATGGAAATACTTTTATCGTGGAGTAAAGGGAAAGAATGTCAACGA
GTTCATCGAGGATTCTTTACAAATACCACAAACAAAACAATATCTATTTA
TCAACAACAGGAGAGTCTCTCACAATGAACTGGCAAAACTGTTGAGGGAA
TATGGACACAATGTTTTAGCTCCGTTCAAAGTTAATCTTATCGTGCAAGC
GGACGATGGGGCAAAGGGGTTGCTATGGACATTGGAGCTATATGGTATTC
GTCGAATGCGCTCCGTTGTTGTGAAACATCCGGAAACCGCTGCTATTCTT
TTCGATATCTCTTTATCCAAATTCAACGAAAGACAACCACTTGTCGATGT
TATTTCTAAACGTTGCCCAAATCTATCGGCAGATTGTGTAAGTCTTTTCC
ACAAGCAGGAAAAACTGGATGATGCATTTTTTGTGAAGGATATGTTCGCT
TTGATGTTTAGTGACGGTTCAATTGAGGAGAATTTCGTCGTCACACTTGC
TGTTAAACCTAATATCAGAGAGGATATGAAAGAATTTTGCGAGAAAAACG
CAATCAAATACTTGGGAAACATCAATATTAATTTTCTGACTGGACAGTTC
TCCATCGATCTTTCTTTGATCACGGCGCGAACGATCAAAGATTTGAAAAA
TCAGATTTATAAAGTCAAACGGACGCCTCCTCATTTGCAAATGATTTTCT
ATCAAAACGCCGAATTGTCAGACTCGAATCAACTCACTTCACATAGCTAC
AATCAAGAATCACTCACTTTCAATATGGTTGTTAAACCAGGCAAAGAAAT
AGAACTTTTCATCAATTGTGTTTTTCTTGACGGTTTGCACATGGACCTTA
AAGTGTGCGAAACAGACACCATTGGTGACCTCAAAGAAATGGTCAGTCAG
AGGTCAGGGATCCCCTCTTCTTTGATGGTCGCTGGTAGCTATCTAGGTGA
ACCTGATCATGTACAGATCTGGGAGACTGGGTTCCAATATGTCTTCCCTG
TCGACTTTAACAAGAAAGTTTTACTGCTAATCAAACGAAAAGGTAAAGAA
GTTCAACGTAAAAGCCACCTAATTCGATATTACGATTATGACACTATCGA
AACACTTTGTGAGGACGTTCAACGAGAATTGGAAGGGGAAGGTCACGTGA
CTATGGAGAAGAACGGGTTCAATAGAGACACATTATTGAAAGATGTTGGA
GAAAAAGAAATCACTTTTTTGGTCAATAAAAACTGCTCACTCATGTAAAT
GAGAAATCACATTGTGGTGGATTTTGGTGATAATGTTACATCAATCTTTT
ATTGGTATTATGTTGACTCTCTTCAAAAATTGAAAAACAGCATCGAAAAG
CGATTCAAAATTCAACTTGAAGACCAAACTTTCAAACATGGAGATATCGT
TGTTGATGAAAACTCTTTTGGGGAACTTTATAAAAATCGGTTCACAGAAG
ATATTGATTTGAAAGTTCTTTCTTCGGACATTTCATTGATTCGGAATGAA
CGAAAACGAGTTTCAATGAATGAGGAACCTTCAGGTCGAGTTGATATTCC
ATGGCTTGACCTTGAAGATCGTGAATTCGTAACAGGAGGGGACAGCGAAA
AAACTATATCAAATCTGAGGCAGGAGTTTCAGAAAATGATTCATAAGCCA
AGACTAGACAATGTTGTATTTTTGCTGGATGATCGCATCGTGTTGAATGA
AGACCAATTAATAGCTGATTTGCTTCTCGATCGTGAATACTTGACCTTAG
GTGTTATAGAGAAGTATTATGAATTAGACCGTGAAGGAATGGGTTTAGGG
CGTGGTTTGAATATTCTACCACGTGTTTATATAATTATTCCACAGATTGA
CGTTGGGACTAATACTGTTGAGTATCCTCTATTAGACGTTCGTCACATCA
GTTTATCTACCATGAAATCTTGGATTGAAAGTATCCATCAAATTCCCTGC
CAAGAACAAGAGTTGGTATGCAATGGGAAGGTGGTTTCAAGTGAAAACTT
CCCTGGTAAAATGTATTACCATCCACCCGAGCCTAAAATTGTCAAATTGC
ACGTCTGTCCAACGCAAGATGAGAAGTTGAACTATTTTTACCTTCAGAAT
AATATAAGAACAATGCCAACAGTCCATTTAACCAGTTTTGATAATGAACG
TGAATGGAAATACTTTTATCGTGGAGTAAAGGGAAAGAATGTCAACGAGT
TCATCGAGGATTCTTTACAAATACCACAAACAAAACAATATCTATTTATC
AACAACAGGAGAGTCTCTCACAATGAACTGGCAAAACTGTTGAGGGAATA
TGGACACAATGTTTTAGCTCCGTTCAAAGTTAATCTTATCGTGCAAGCGG
ACGATGGGGCAAAGGGGTTGCTATGGACATTGGAGCTATATGGTATTCGT
CGAATGCGCTCCGTTGTTGTGAAACATCCGGAAACCGCTGCTATTCTTTT
CGATATCTCTTTATCCAAATTCAACGAAAGACAACCACTTGTCGATGTTA
TTTCTAAACGTTGCCCAAATCTATCGGCAGATTGTGTAAGTCTTTTCCAC
AAGCAGGAAAAACTGGATGATGCATTTTTTGTGAAGGATATGTTCGCTTT
GATGTTTAGTGACGGTTCAATTGAGGAGAATTTCGTCGTCACACTTGCTG
TTAAACCTAATATCAGAGAGGATATGAAAGAATTTTGCGAGAAAAACGCA
ATCAAATACTTGGGAAACATCAATATTAATTTTCTGACTGGACAGTTCTC
CATCGATCTTTCTTTGATCACGGCGCGAACGATCAAAGATTTGAAAAATC
AGATTTATAAAGTCAAACGGACGCCTCCTCATTTGCAAATGATTTTCTAT
CAAAACGCCGAATTGTCAGACTCGAATCAACTCACTTCACATAGCTACAA
TCAAGAATCACTCACTTTCAATATGGTTGTTAAACCAGGCAAAGAAATAG
AACTTTTCATCAATTGTGTTTTTCTTGACGGTTTGCACATGGACCTTAAA
GTGTGCGAAACAGACACCATTGGTGACCTCAAAGAAATGGTCAGTCAGAG
GTCAGGGATCCCCTCTTCTTTGATGGTCGCTGGTAGCTATCTAGGTGAAC
CTGATCATGTACAGATCTGGGAGACTGGGTTCCAATATGTCTTCCCTGTC
GACTTTAACAAGAAAGTTTTACTGCTAATCAAACGAAAAGGTAAAGAAGT
TCAACGTAAAAGCCACCTAATTCGATATTACGATTATGACACTATCGAAA
CACTTTGTGAGGACGTTCAACGAGAATTGGAAGGGGAAGGTCACGTGACT
ATGGAGAAGAACGGGTTCAATAGAGACACATTATTGAAAGATGTTGGAGA
AAAAGAAATCACTTTTTTGGTCAATAAAAACTGCTCACTCATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:305109..307256 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2148:2149 |
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