XLOC_017492 (mRNA) -

Overview
NameXLOC_017492
Unique NameXLOC_017492
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000309_pilon:248617..249464-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017492 ID=XLOC_017492|Name=XLOC_017492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=848bp|location=Sequence derived from alignment at sc0000309_pilon:248617..249464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAATTGTGGCAGTTAACAAATCACTTAAAGCTAAAGCAAAATC CAAGAAAAAATCAGAGATTTGCTTTGTTGAACTCAAGAGATCTGCTGAAA CTGGTTAGTATATTTTGTTTGTGCGGGACAACTGAAACTCTAAATTTTGT CATCAATACAGACCAAAGAGATTTATCCCTGTTTCAAACTTTTCAGCCTG AATTTTGTTGCACAAAAACTTTTGAAAGGTTTAATTTTTAGCTAAGCTTT GTTGTCTTGTTCAATTTTAAATGCATGCATTCTTTCTCTTTTTTTTGGAT AATCTAGGTCAAAGGATCTTCAAGCTGAAGAGACCAAAACATAACAATCG AATGAAAAGAAGAATATCAAATACTGGTAAATGTGCAGTTACATTATTTT ATACACTGGGTAATATTGAGGTACCTAAATCTAAATAGAGTTGTGTGTGT TGTATGTATTGAAATTTCAACTCTTTCTTGTTATTTTCATCAGTAATCAC TGCAGATGAGCAAGTTTTGGACATTGATGTAGAAAATTCAAACTGGCAAA TTGCAGAAAATGTGGACACCATCGATAATGAATTAAATGACATAAATTCA CAAAGTGATACAAAAAGTAGGTATCATATCATCCCTTCTTGAAGACAATT AAGGAAAAAACATTGTTTAAAATTTTCACTGTTATAAGACTCTATGTAAG ATTAAATCCACCCTCATAAAAAAGGGGGAAAATTGGCAAAAAAACATTTT TGGTGTTAATGTAACAGAGTAATAACGATCAGCTATTTTAATTTATTTCA GTGAATAGTTGGTTAGAAACGCTTCTTAACTTTGTCAAAACAAAATAG

Coding sequence (CDS) from alignment at sc0000309_pilon:248617..249464-

>XLOC_017492 ID=XLOC_017492|Name=XLOC_017492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000309_pilon:248617..249464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACAAATTGTGGCAGTTAACAAATCACTTAAAGCTAAAGCAAAATC
CAAGAAAAAATCAGAGATTTGCTTTGTTGAACTCAAGAGATCTGCTGAAA
CTGATGAAACAAATTGTGGCAGTTAACAAATCACTTAAAGCTAAAGCAAA
ATCCAAGAAAAAATCAGAGATTTGCTTTGTTGAACTCAAGAGATCTGCTG
AAACTGGTCAAAGGATCTTCAAGCTGAAGAGACCAAAACATAACAATCGA
ATGAAAAGAAGAATATCAAATACTGGTCAAAGGATCTTCAAGCTGAAGAG
ACCAAAACATAACAATCGAATGAAAAGAAGAATATCAAATACTGTAATCA
CTGCAGATGAGCAAGTTTTGGACATTGATGTAGAAAATTCAAACTGGCAA
ATTGCAGAAAATGTGGACACCATCGATAATGAATTAAATGACATAAATTC
ACAAAGTGATACAAAAATAATCACTGCAGATGAGCAAGTTTTGGACATTG
ATGTAGAAAATTCAAACTGGCAAATTGCAGAAAATGTGGACACCATCGAT
AATGAATTAAATGACATAAATTCACAAAGTGATACAAAAATGAATAGTTG
GTTAGAAACGCTTCTTAACTTTGTCAAAACAAAATAGTGAATAGTTGGTT
AGAAACGCTTCTTAACTTTGTCAAAACAAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017492XLOC_017492-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309_pilongenomesc0000309_pilon:248617..249464 -
Properties
Property NameValue
Aaloc298-342:46
Aaloc175-294:354
Aaloc106-171:540
Aaloc1-102:849