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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000272_pilon:242708..246103+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017283 ID=XLOC_017283|Name=XLOC_017283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3396bp|location=Sequence derived from alignment at sc0000272_pilon:242708..246103+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGTAGAGGAAGAGTTTTTTGAGATATCCGCAAATCCTTTTGAGTG
TGGAATTACACCTCCAGGGCTTGTTGGTGAGCTGAAACGATGAAAGAATA
GCCCtcttcataaattattttggcTGCAATGGCTACCTCGTCTCGACACC
TTTACCAAGGGATTAAATTCCTTGAGTctttaagttttattttaataCCA
TAATGACcagttagtgagggctgtactatGAAATATTGACCGTAAGCCTC
TTATGAGCTCCGCTGGGAACCAATTAacataacaatattttgaaaaagag
gtaagcgttgctcgtgacgtaatttacaaaaatgttaCACATGTATCTTT
TGATAAAAGggaccaaatttaataaatgatttgttctttcaaagttttta
ttaaAACTCGAGAAAATTTTACTTGTGAAAGAGAAACTTTTCTATGGCGC
ATCGATCTAAAAAAGCATCTTATTTAACCCTTTGAATCATTTTGTGCGTG
ATGCAAGTATGGCTTCTTAGTTTCAGAAATATTCGACAGGCAACATATAT
ATGGATGTGTATCTTGATGAAATACAGCAAATTATTTCTCAGAGCCTAAA
ACTATTGTCTCAATATTGCTAGGATAAAACATGACATCGGTTTGTATTAT
TACAACGAAATGCAGTCTACTCTTTCTAGTTTTAAACCTTTGTTATTCCA
ATCTTTCTTTGGCgtttttacactttttgcttaaaaaacattaaaatcgc
ttaaatagagctttttaagcgttttaaagctattttagtgaaaattcgtc
ggttctgcccccttcgctggacttcaatgggtctaatccattgcaaggga
gtgtcccacgaggtttaggaccattgggaaccagctcaaccctaagctta
actaaggctccagtaaagcgctgtaagcttacagtgtaagcccaggcggc
tctgtaggcctaaaaaccggttttctggcaaaactactgttcccagccgg
ttctaaaccctctaaatcccTTCAGCACCATTgaaacatgctaattagag
cctgtGAAAGTAATCACACTCTGTAATTCTAATCTTTCTCTAAtcgatcg
aattagagagagtcaactgtttTGCGACAGGAGTAATAACTACTTTTCTT
TCCTAACGTTCTTTCTTGAAATTGATTGAGAATAAAACGAAGCCAAACTT
ACAAAGCTCTTGACAGTACTGATCTGGTAGCTTCAAACCGACGACTGTAT
GCAAAGTTAGCctgaaatgtaaaaaaagtGTTGAGTTTATTATAGATTTG
GTGAAAAACGactacttttgaaaaaagcttttaaaattaatttgtgGTAG
TTTTTGCGCATATTAGTCCTAATGAAGACCATGTTTAAAGCATatcctcc
ttttcaaaaaaagtaacTTTCTTTGATCAAAAACATAAAGAACAGGTTAT
GAGTAATCTACACAGGATAAAGATCGCAATGCACCTAGCTACAAAATTAT
TGTGACTGAAGATTTCACAAAGACGGAGCCCCGGGGAAGAGCTTCGGCAA
AAATTGGGTGCTAAGTATGTGGTTATGtgtggacggtaagggtcggtttt
ttcacacttcaaagtctctctaagggaaaattcatgatttcaggattttt
ttgatttcaggtgaaaaagaattaaaaagtctctctaataGTTGGGGGCC
AggggtcccgtgacatcttttttacgacctaaccatttttagtctatgTT
GAAAATATGACGATTTACTTACATATCTGTATGTCTTAACTTTTTCTGCT
AATTGCtttgtttattattttaaaGCTGATGTCATTTCCATTAGGGGTTT
TACATCGGCTGTCCTTTTAATTGTCACTAATTATTTTACTGTAGTGAAGT
GTATATTTTTTCCTTAGGCTTTTTATTATGAAGATACTACTCTATGAACA
AGAATATTACGTATATTACacgatatttttgagagggagaaCGCGGATAA
AGCCcgcgaaaactttttatgaccaaaataatGATGGAATAGGCAAAACT
GAAAGGGAAATGTGGGGTAGgaaaatagctgattttcaaaagtcaaaata
aacgaaaatgattgataccatctgaaagagcatgaaattctgagcaaaaa
atgtaGTACAACAATTCTCTGACAAAAACACACAAGGAGATACAGCCGAT
TGAAGTCCAAAAACATACAGACATTAGTACGACTTTacacaagatttgac
gtcaaatcacagttagagctgacagttagttgatCTTAACGCAGCAGGTC
CAGTTCACACATACCCCTCATATGTGCCatccctagtaccccccccccct
cggggaCGAAACGAATGAAGATCAAGGAAAAGTGTGAAATCGCAAAGAAA
CGAAATGAGGAAAGGAGCAAAGTAACAAAGATTTCATCTGGCGAGTGAAG
GGAAGTCCCAGGTAATGATACAGCGACCGGCAACGAATAGAGACATTATC
ACCCCGTCTTAGCAATATTGTGAATCCAGTTGATACTGTATCAACTTTAT
AGATAGGATTGTAACTAATAGTTGATattgaaatttccttaattcgaaca
atttGTATTCCCAGTGCGTTCGAGTTAAAGGGACTCCGCTGTAATAATTC
GAGGTGATGGACTCTTAATTTGGTGAAAATAATTCACTTATACGAGCCTC
GCGTAAATATGAATTAGAAGAATCAGACCAATTCCTGACATggaaatgtc
tttttttataaaaatagtgtactttgaatgagggtcaagtattcttaaga
aagtgccaaaattgagggtgaattattcttaacgtattcttacctttttt
agacttgacttttttacaaacatgagaaaagatcaatttgagagttttgg
acttttgagtgagcacttgggttaaaattacatttcttcctcaaagcttc
aatttatttctaacaaaggaaaaagtttttctgttaaccaaatacaaaat
gactgtattcttatcgaattctgtgaaattcaccctagagggtattctta
gggtattcttacgatttggccgattttcaccctgataatcctatagaaga
tattcttataaaaaaacttgtatttaGAAATTTCCCTTTTCCCTTTATGA
ATTAAAACTCGTCAAAACGATAAAGCATTGCCGGCTAACTGGGAAAGGGA
CAGAAAAAGCAAGTTTACCGGTGTATTGGGTGTGTTTGATGGGATGAAAT
GTTCATGTGAAGACCATAAGGATGAACGGTTGCCAGCTCGTGATATGTTG
ACCGGTGAGGAAGCAAAACCATCTGTTCCGCCATTATCATTATTCAGTCT
AAGTAAAAAGAATATGATTGTCAACTACCGAACATCCCCAATATAG Coding sequence (CDS) from alignment at sc0000272_pilon:242708..246103+ >XLOC_017283 ID=XLOC_017283|Name=XLOC_017283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000272_pilon:242708..246103+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGTAGAGGAAGAGTTTTTTGAGATATCCGCAAATCCTTTTGAGTG
TGGAATTACACCTCCAGGGCTTGTTGGTGAGATGAGGGTAGAGGAAGAGT
TTTTTGAGATATCCGCAAATCCTTTTGAGTGTGGAATTACACCTCCAGGG
CTTGTTGGTGAGAAAGCTCTTGACAGTACTGATCTGGTAGCTTCAAACCG
ACGACTGTATGCAAAAAAGCTCTTGACAGTACTGATCTGGTAGCTTCAAA
CCGACGACTGTATGCAAAGTTTACCGGTGTATTGGGTGTGTTTGATGGGA
TGAAATGTTCATGTGAAGACCATAAGGATGAACGGTTGCCAGCTCGTGAT
ATGTTGACCGGTGAGGAAGCAAAACCATCTGTTCCGCCATTATCATTATT
CAGTCTAAGTAAAAAGAATATGATTGTCAACTACCGAACATCCCCAATAT
AGGTTTACCGGTGTATTGGGTGTGTTTGATGGGATGAAATGTTCATGTGA
AGACCATAAGGATGAACGGTTGCCAGCTCGTGATATGTTGACCGGTGAGG
AAGCAAAACCATCTGTTCCGCCATTATCATTATTCAGTCTAAGTAAAAAG
AATATGATTGTCAACTACCGAACATCCCCAATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000272_pilon | genome | sc0000272_pilon:242708..246103 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 136-318:3214 |
| Aaloc | 82-132:1203 |
| Aaloc | 1-81:1 |
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