XLOC_016958 (mRNA) -

Overview
NameXLOC_016958
Unique NameXLOC_016958
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:2103653..2104526+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016958 ID=XLOC_016958|Name=XLOC_016958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=874bp|location=Sequence derived from alignment at sc0000023_pilon:2103653..2104526+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCACGAAGCCTTTGGCTGAAGAACGAATTTCCTTTGCATATTTT TAAGATCATCATGTACTCAATTCAGGTAAGGTTGTATCTTTCTTGAGAAA CAGTATATGGCGCTCTCGTTTGAGTTCAATTACATGTTTTCAGTGGATTG ATTAcccaaataaaaactttaaattttccactctttctttttttgatttt cccaGCACTGGTGCAGGTGGTGTGCAAGACAATTCTATAAGTTCTGTAGG GTTGTATCTAATGTTGATACAACTCGTTTAATTTTGGATAATTATGGGCT TTAATTTCAATTATGTTTTCTTAACAGAATCAATATTCATACCGAGCCAT CGAACTATTATTGTCACATTTGGATAAGCACAAGAATAGTGAAGCAGAGA TGAGAGCTAGTGTGGTGGAGATGATTTCAGCATCTGTCAGCATTGCCACT GGTGGTTCTATAGGTGGGTTCTTCTTTGCTGCAAGAATTACTTAATTGAA ATAATTACTTGATAGATGGCTAATAATATAgacctttttattattatact CCCTAAATCGAGAtgtaaattttacaatttttgtgtGTTCAGCATTTTTT CACCAGAATTTGAGCCTATTAGTTTGGAGTTTTACTCATTACTTGCCAAA TTTGAAATGTCGAACCACCAAACCTACAAGAGTTCAAACCTTTGAGATTG GTTGTGTAACAAAGTGGGGGTGAGTGCACAACAATTTCATCGATAAAGTT TTCTACTGTCACCTTTTATATTTTAGGGCCATCAATATTGGAGGTGTTCA ACACTTTactgaaacatttgaaaatctcGGTTGATACCATGGGCATTCAG GTAAAGTATTCGTTGTCATGGTAA

Coding sequence (CDS) from alignment at sc0000023_pilon:2103653..2104526+

>XLOC_016958 ID=XLOC_016958|Name=XLOC_016958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000023_pilon:2103653..2104526+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCACGAAGCCTTTGGCTGAAGAACGAATTTCCTTTGCATATTTT
TAAGATCATCATGTACTCAATTCAGATGGATTCACGAAGCCTTTGGCTGA
AGAACGAATTTCCTTTGCATATTTTTAAGATCATCATGTACTCAATTCAG
AATCAATATTCATACCGAGCCATCGAACTATTATTGTCACATTTGGATAA
GCACAAGAATAGTGAAGCAGAGATGAGAGCTAGTGTGGTGGAGATGATTT
CAGCATCTGTCAGCATTGCCACTGGTGGTTCTATAGAATCAATATTCATA
CCGAGCCATCGAACTATTATTGTCACATTTGGATAAGCACAAGAATAGTG
AAGCAGAGATGAGAGCTAGTGTGGTGGAGATGATTTCAGCATCTGTCAGC
ATTGCCACTGGTGGTTCTATAGGGCCATCAATATTGGAGGTGTTCAACAC
TTTactgaaacatttgaaaatctcGGTTGATACCATGGGCATTCAGGTAA
AGTATTCGTTGTCATGGTAAGGCCATCAATATTGGAGGTGTTCAACACTT
TactgaaacatttgaaaatctcGGTTGATACCATGGGCATTCAGGTAAAG
TATTCGTTGTCATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016958XLOC_016958-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:2103653..2104526 +
Properties
Property NameValue
Aaloc214-309:779
Aaloc76-210:328
Aaloc1-75:1