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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:99086..101491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016743 ID=XLOC_016743|Name=XLOC_016743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2406bp|location=Sequence derived from alignment at sc0000130_pilon:99086..101491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGATAGAAAGTGTATTTGGATGTTTCTATTCAGTTCAGCAATTAT
AGTTTGCTTCACTGCCGAGGAAATTAATGGTTCGAAAGTGTTTAATCTTG
CTGTGATAGACAAGAGTATCAAAGTTATCCCTTATCACGCGACAACAGCA
CATTACAGACAATGCTTCAGTATTTGTTCTCTCAATCCTAAATGTCTTTC
TTTCGACCATTCCTACACATTTGAGATAGGTGAATGTAGTTTTTACGATA
TTGGTTTACCTGTACTTAACCAAACAAATAAATTGATGGAGAAGACAGGC
TTCAAGTACTACACCATCCCGATCATTGCAACTGATTGTATTGACTGGTA
CAGGCTGGGCCATCGTGAGGACGGTGTCTATGAAGTCTATTTGCTGGCGA
AGTACAAACGTCGCGTTTATTGTCTTATGACTGGATCTGGAGGTGGCTGG
ATGGCCTTTCAGCGTAGATTCGATGGTAAGATTTGTTTTGGCAAGTTAAC
GCAACTTGCAACCTTCTACAGTTTCTAGGCGTGTTTTAAAATGAGAAACC
TATTCAACCAATAGGACGTTTTTGGATATTTCTGCTTCTACACGTCTTTA
TAAGAACAAACTGTACAAGAACGCGTGACTTCGATGGCCAAAAGATAAAG
AACACGTTAAGAACATTTTAAGGCTCAAGGATTCTAAAAAACCCAATTTC
ATAGGAAATTGAACAAAAATATACTTACAAAATGGAAAAAAAATTTAACA
GCATCTGAAGGCTTAAAAAATATTTCTTATAAAAAAACCTCTAACCCGAC
TAGAACCAAGTTTGAAGAACTAAAGACTGAGCAATAAGTGATGAAAGCAA
GGAACTTGGTGAAGGGATCAGCAAAATAGGGAAAAAAGAAAGAAATACGG
GATTGAAATGGAGTAATGGGAATCTTCGACTTTTAATTTCTTCAGGAAGT
GTACAGTTTTTCGGTCGAAATTGGGAAGATTTCAAAAATGGTTTCGGCGA
TTCTGATGGTGAATATTACCTTGGCAACGAGCTATTGCATTTATTGACAA
CTTCCGAAAAGCATGACTACATGGTACAAGCACATGCCAAAGATGGGAGT
CGAAAACGAAAACAGATTCACAACGTCCGCATTGAAAGCGAAGAGGAGAA
TTACAAGATCGAATACCGTGAAGAAGATATTGATAGCGTAATGAAAAGAT
TTTACTTTCAAGTTATTAGATTCGTGGGCAAGCATACTGGCCTCTTATTG
GTAACTCTCTTTGATGGGAGTTTTCTTTTGAAAGGGGTATCCGCAAAAGG
AGTTAATACAATACCTACAAATTTGTCTTTCTTCAAACGGTGCAACCTTT
ATATATCTCTGGACCAAGCTTTATCCACCATCTTTGATCAGAGTTTTTTT
TGAATTGGTACCCGTAAAGAAGCCATTACATTGTTCAAAATTTGTCTAAC
GACAAAATGGCGCTACATCACATCACACGAGCAAGCAAAGTAGATCTCGG
TGCGGGTACCACTTTCAAGAACACTCCGATCAAAATATTTTGCTTGGCCG
GAATTAATACCCCATTGAATATTGATATTGATTCCAGGGTTTATTCCTTT
TTTTTCGAAAAAAAGTTTTCACTTGGTCTATCCTTAGTCGTAATATTTTT
ACTATAAACTTTTACTAAGAATGTCTAGGTCTAGGAGTCGTCTCGATAGA
ACCGTTTAAGTAACGATTTATGTAACCTGTCAGCTCACTGAATGCAGTTT
CAGGATTTTCCGGAAGTACAATTCAACTTAGTTTTATAGGTTTTTCATGT
CTTAAGGCCGCTACCCACTCAGCATTTTATGGTCGGCGAACAAGGCGCAC
GGCTCGGGCGCTTTGGTCGAAAATGCTGAGTGGGTAGCGACCTTTATATT
ACGTAACTTTCGCCATTATGGAAGCAAACGTTCGGTTTGCGTAAAGACCA
GCCTCTCCAGATTCGAATATTTGCTTCCATAATGGCGGAAATTACGTAAC
TTAACAAAACATAAAATCCTCTATGGAATAAAACATTAAAATTTGATTTG
ACACGATCGCTTACGCAAATCGAATGTTTTCTTCCACTATGTCGGAAGTT
AGTCAAATATCCTTCTGATCAAAATGTTAAATTGATCAAAATAATTTTTT
TCAGGCCTCTGGTAGCGGTACCAATTATGGACTTGTTATGAGAGGTCAAG
ACTTCTTAACTTTTGATCATGACCGATATGACTGTGCTCAAAGATATGGG
GGATGGTGGCATAAAAAGTGCCATGCTGTCGCTATGAATGGAAACTATAT
ATCGACAAATCACGCTAACGGTATTATGTGGGGTGGTTGGAAAGGACATG
GTGAGTCACTACAAAGTTGTTTGTTGATGGTACGACGTTCTTCTTTTCAT
CATTGA Coding sequence (CDS) from alignment at sc0000130_pilon:99086..101491- >XLOC_016743 ID=XLOC_016743|Name=XLOC_016743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000130_pilon:99086..101491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGATAGAAAGTGTATTTGGATGTTTCTATTCAGTTCAGCAATTAT
AGTTTGCTTCACTGCCGAGGAAATTAATGGTTCGAAAGTGTTTAATCTTG
CTGTGATAGACAAGAGTATCAAAGTTATCCCTTATCACGCGACAACAGCA
CATTACAGACAATGCTTCAGTATTTGTTCTCTCAATCCTAAATGTCTTTC
TTTCGACCATTCCTACACATTTGAGATAGGTGAATGTAGTTTTTACGATA
TTGGTTTACCTGTACTTAACCAAACAAATAAATTGATGGAGAAGACAGGC
TTCAAGTACTACACCATCCCGATCATTGCAACTGATTGTATTGACTGGTA
CAGGCTGGGCCATCGTGAGGACGGTGTCTATGAAGTCTATTTGCTGGCGA
AGTACAAACGTCGCGTTTATTGTCTTATGACTGGATCTGGAGGTGGCTGG
ATGGCCTTTCAGCGTAGATTCGATGATGTTTGATAGAAAGTGTATTTGGA
TGTTTCTATTCAGTTCAGCAATTATAGTTTGCTTCACTGCCGAGGAAATT
AATGGTTCGAAAGTGTTTAATCTTGCTGTGATAGACAAGAGTATCAAAGT
TATCCCTTATCACGCGACAACAGCACATTACAGACAATGCTTCAGTATTT
GTTCTCTCAATCCTAAATGTCTTTCTTTCGACCATTCCTACACATTTGAG
ATAGGTGAATGTAGTTTTTACGATATTGGTTTACCTGTACTTAACCAAAC
AAATAAATTGATGGAGAAGACAGGCTTCAAGTACTACACCATCCCGATCA
TTGCAACTGATTGTATTGACTGGTACAGGCTGGGCCATCGTGAGGACGGT
GTCTATGAAGTCTATTTGCTGGCGAAGTACAAACGTCGCGTTTATTGTCT
TATGACTGGATCTGGAGGTGGCTGGATGGCCTTTCAGCGTAGATTCGATG
GAAGTGTACAGTTTTTCGGTCGAAATTGGGAAGATTTCAAAAATGGTTTC
GGCGATTCTGATGGTGAATATTACCTTGGCAACGAGCTATTGCATTTATT
GACAACTTCCGAAAAGCATGACTACATGGTACAAGCACATGCCAAAGATG
GGAGTCGAAAACGAAAACAGATTCACAACGTCCGCATTGAAAGCGAAGAG
GAGAATTACAAGATCGAATACCGTGAAGAAGATATTGATAGCGAAGTGTA
CAGTTTTTCGGTCGAAATTGGGAAGATTTCAAAAATGGTTTCGGCGATTC
TGATGGTGAATATTACCTTGGCAACGAGCTATTGCATTTATTGACAACTT
CCGAAAAGCATGACTACATGGTACAAGCACATGCCAAAGATGGGAGTCGA
AAACGAAAACAGATTCACAACGTCCGCATTGAAAGCGAAGAGGAGAATTA
CAAGATCGAATACCGTGAAGAAGATATTGATAGCGCCTCTGGTAGCGGTA
CCAATTATGGACTTGTTATGAGAGGTCAAGACTTCTTAACTTTTGATCAT
GACCGATATGACTGTGCTCAAAGATATGGGGGATGGTGGCATAAAAAGTG
CCATGCTGTCGCTATGAATGGAAACTATATATCGACAAATCACGCTAACG
GTATTATGTGGGGTGGTTGGAAAGGACATGGTGAGTCACTACAAAGTTGT
TTGTTGATGGTACGACGTTCTTCTTTTCATCATTGAGCCTCTGGTAGCGG
TACCAATTATGGACTTGTTATGAGAGGTCAAGACTTCTTAACTTTTGATC
ATGACCGATATGACTGTGCTCAAAGATATGGGGGATGGTGGCATAAAAAG
TGCCATGCTGTCGCTATGAATGGAAACTATATATCGACAAATCACGCTAA
CGGTATTATGTGGGGTGGTTGGAAAGGACATGGTGAGTCACTACAAAGTT
GTTTGTTGATGGTACGACGTTCTTCTTTTCATCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:99086..101491 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-969:253 |
| Aaloc | 478-717:1460 |
| Aaloc | 1-474:2407 |
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