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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:199020..200963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_016159 ID=XLOC_016159|Name=XLOC_016159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1944bp|location=Sequence derived from alignment at sc0000256_pilon:199020..200963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACCTAAGAAagaagttatcaaaacaaaggaAGATGCCAGTAAATG
GCTCTCTAATTTGGGATTAGCTGTATCTGGAACAAAAGAGGAACTTTTAA
CAAGAATATCTGGCTAtcaaaaatggccaaaactcGTGGAAAAGCTAAAA
TCTCGAACAAAACGCTACTTTAAATTCAAGTGCAGCATGGATCCTACCTC
TATCCCCCCACCTTCAGCCTGCTGGGATGTCAAAGAATCCAAGTACCCAG
TAATTTCGCAGGATATTATGGAACATTATTTGTCATTTAAAAAAGAAGGA
AACAAGGGGCAAGTCGAAAAAGCTCATAGGATGTTACAGAGCAGAAAGAT
AATATCAGTTAAAACCCTGGAAGATCAAGGGGCAAAATATGTAAAAGCCA
TGATCCAAAAGTCTTATGGGAGTGAGTCACGTCCAGcagtaattttattt
ttcaataatcTCCCAACCAATGCCCATTGTAACTGTCCTGTTGGAGCCTC
TGGACTATGTTGTCATATAATTGCCTTACTGCTATTTTTAAAATACTACA
AGGACACTGGAGAGAAAATATTTAGACTAACTTGCACGGAACAATTGCAA
AAGTGGCACAAAAGAACAACTAAAGGGTCAATCCCAATGATGGCTCTAGC
CAAATTAAAACTTAGGtccgcaaaaaaaaagaaaagaatctcAGCTGCCG
ATTCAGATAATTCACGTAATAAAAGAAATGTTCCTGAGATAATTTCAAAG
ATGCAAGAAAAGCTTAAAAACTTTGTTCCTGTTACAGAACATGTCTATTC
CGTTTTGTCAAAGTCTGCTTTAGGAAGAAAAAGCTCAGTTGGACAGCATC
TTCTCTTTAAGAACAAAGTTAACTCCTTATCTGACCATCAGTATCTTGGC
CAATACAGTAATGAAATTTCcctcaaaaagcaaaaaattgaattaaaaag
tgaagtaattgataaaaaaattgaacaaatgcTTTCTGGTAAACCTGATG
ACTTTATTTTAAATCCAGATGTAAACAAAATCAAACCTGAAGATATCATT
TTACAAGATACTCTAAATATTGAACTTCAAGAATTTAAAAGTCTATATGA
AACTGATCCTGATTAtatttatttggaaaaaaacataCATGAACAATCAT
CTGGTGAAATAAGTATTGATATTTGTTTCCGTGAAAGCCCTATTCCATAT
TCAACTAACCATATTGATCTAGTCCAAAATACCCCTGAATGGCAAGAAGC
CCGGAAGTTCCGAATAACTGGTTCTAGGATATCCTCCCTTTTGGGCTTGC
ACGGTGAGAAAAAGTTTGTGAGTTGTTGGGATATTGTTCGTGGCGGTAAA
ACTGAAAGGAGCTTGAAGGGGATTACTAATATTGAAAGGGGACACTATTA
TGAAAAAGATGGTATACAgttctttcaacaaatttccaaaGCAACAGCAG
AATCTTGCGGTTTTTATATTCATCCAACAAATCCACGATTTGGGGCTAGC
CCAGACGCTCTTGGTCCAGACGGTATCCTTATTGAAATGAAAACTAGAAC
CGATAATGCGGAAAGCCCACTTGAAAGTATGTCTAGTTACCCGAACTACT
ATTTACAATGTCAACTACAAATGGAATGTACCGGTGCACACACTTGTATT
CTGGTATCTTATCTCCCAGAGAAAGAAACAGCTAATTTCTTTGCTGTAAA
GAGAGATCAAGTGCTAATGAATATCATCATGGATGTTTGTATGTCGATTT
TGAATAACGAGCCTTTGGTTGATTGGTATGAAGGCGATGACTTGATTAGA
AATATTGGACTCCAGCTCTTAAATAAACCGTTGAACTTTAACGTGATTAA
GCCGTTAACCAGATATATCAAAGACCAATGTAAGAGCAAAATACAAAGAG
TTAATTTCGTAGATGAGATTGATTTACAAGTCAATAGGCTATAA Coding sequence (CDS) from alignment at sc0000256_pilon:199020..200963+ >XLOC_016159 ID=XLOC_016159|Name=XLOC_016159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000256_pilon:199020..200963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACCTAAGAAagaagttatcaaaacaaaggaAGATGCCAGTAAATG
GCTCTCTAATTTGGGATTAGCTGTATCTGGAACAAAAGAGGAACTTTTAA
CAAGAATATCTGGCTAtcaaaaatggccaaaactcGTGGAAAAGCTAAAA
TCTCGAACAAAACGCTACTTTAAATTCAAGTGCAGCATGGATCCTACCTC
TATCCCCCCACCTTCAGCCTGCTGGGATGTCAAAGAATCCAAGTACCCAG
TAATTTCGCAGGATATTATGGAACATTATTTGTCATTTAAAAAAGAAGGA
AACAAGGGGCAAGTCGAAAAAGCTCATAGGATGTTACAGAGCAGAAAGAT
AATATCAGTTAAAACCCTGGAAGATCAAGGGGCAAAATATGTAAAAGCCA
TGATCCAAAAGTCTTATGGGAGTGAGTCACGTCCAGcagtaattttattt
ttcaataatcTCCCAACCAATGCCCATTGTAACTGTCCTGTTGGAGCCTC
TGGACTATGTTGTCATATAATTGCCTTACTGCTATTTTTAAAATACTACA
AGGACACTGGAGAGAAAATATTTAGACTAACTTGCACGGAACAATTGCAA
AAGTGGCACAAAAGAACAACTAAAGGGTCAATCCCAATGATGGCTCTAGC
CAAATTAAAACTTAGGtccgcaaaaaaaaagaaaagaatctcAGCTGCCG
ATTCAGATAATTCACGTAATAAAAGAAATGTTCCTGAGATAATTTCAAAG
ATGCAAGAAAAGCTTAAAAACTTTGTTCCTGTTACAGAACATGTCTATTC
CGTTTTGTCAAAGTCTGCTTTAGGAAGAAAAAGCTCAGTTGGACAGCATC
TTCTCTTTAAGAACAAAGTTAACTCCTTATCTGACCATCAGTATCTTGGC
CAATACAGTAATGAAATTTCcctcaaaaagcaaaaaattgaattaaaaag
tgaagtaattgataaaaaaattgaacaaatgcTTTCTGGTAAACCTGATG
ACTTTATTTTAAATCCAGATGTAAACAAAATCAAACCTGAAGATATCATT
TTACAAGATACTCTAAATATTGAACTTCAAGAATTTAAAAGTCTATATGA
AACTGATCCTGATTAtatttatttggaaaaaaacataCATGAACAATCAT
CTGGTGAAATAAGTATTGATATTTGTTTCCGTGAAAGCCCTATTCCATAT
TCAACTAACCATATTGATCTAGTCCAAAATACCCCTGAATGGCAAGAAGC
CCGGAAGTTCCGAATAACTGGTTCTAGGATATCCTCCCTTTTGGGCTTGC
ACGGTGAGAAAAAGTTTGTGAGTTGTTGGGATATTGTTCGTGGCGGTAAA
ACTGAAAGGAGCTTGAAGGGGATTACTAATATTGAAAGGGGACACTATTA
TGAAAAAGATGGTATACAgttctttcaacaaatttccaaaGCAACAGCAG
AATCTTGCGGTTTTTATATTCATCCAACAAATCCACGATTTGGGGCTAGC
CCAGACGCTCTTGGTCCAGACGGTATCCTTATTGAAATGAAAACTAGAAC
CGATAATGCGGAAAGCCCACTTGAAAGTATGTCTAGTTACCCGAACTACT
ATTTACAATGTCAACTACAAATGGAATGTACCGGTGCACACACTTGTATT
CTGGTATCTTATCTCCCAGAGAAAGAAACAGCTAATTTCTTTGCTGTAAA
GAGAGATCAAGTGCTAATGAATATCATCATGGATGTTTGTATGTCGATTT
TGAATAACGAGCCTTTGGTTGATTGGTATGAAGGCGATGACTTGATTAGA
AATATTGGACTCCAGCTCTTAAATAAACCGTTGAACTTTAACGTGATTAA
GCCGTTAACCAGATATATCAAAGACCAATGTAAGAGCAAAATACAAAGAG
TTAATTTCGTAGATGAGATTGATTTACAAGTCAATAGGCTATAAATGAAA
CCTAAGAAagaagttatcaaaacaaaggaAGATGCCAGTAAATGGCTCTC
TAATTTGGGATTAGCTGTATCTGGAACAAAAGAGGAACTTTTAACAAGAA
TATCTGGCTAtcaaaaatggccaaaactcGTGGAAAAGCTAAAATCTCGA
ACAAAACGCTACTTTAAATTCAAGTGCAGCATGGATCCTACCTCTATCCC
CCCACCTTCAGCCTGCTGGGATGTCAAAGAATCCAAGTACCCAGTAATTT
CGCAGGATATTATGGAACATTATTTGTCATTTAAAAAAGAAGGAAACAAG
GGGCAAGTCGAAAAAGCTCATAGGATGTTACAGAGCAGAAAGATAATATC
AGTTAAAACCCTGGAAGATCAAGGGGCAAAATATGTAAAAGCCATGATCC
AAAAGTCTTATGGGAGTGAGTCACGTCCAGcagtaattttatttttcaat
aatcTCCCAACCAATGCCCATTGTAACTGTCCTGTTGGAGCCTCTGGACT
ATGTTGTCATATAATTGCCTTACTGCTATTTTTAAAATACTACAAGGACA
CTGGAGAGAAAATATTTAGACTAACTTGCACGGAACAATTGCAAAAGTGG
CACAAAAGAACAACTAAAGGGTCAATCCCAATGATGGCTCTAGCCAAATT
AAAACTTAGGtccgcaaaaaaaaagaaaagaatctcAGCTGCCGATTCAG
ATAATTCACGTAATAAAAGAAATGTTCCTGAGATAATTTCAAAGATGCAA
GAAAAGCTTAAAAACTTTGTTCCTGTTACAGAACATGTCTATTCCGTTTT
GTCAAAGTCTGCTTTAGGAAGAAAAAGCTCAGTTGGACAGCATCTTCTCT
TTAAGAACAAAGTTAACTCCTTATCTGACCATCAGTATCTTGGCCAATAC
AGTAATGAAATTTCcctcaaaaagcaaaaaattgaattaaaaagtgaagt
aattgataaaaaaattgaacaaatgcTTTCTGGTAAACCTGATGACTTTA
TTTTAAATCCAGATGTAAACAAAATCAAACCTGAAGATATCATTTTACAA
GATACTCTAAATATTGAACTTCAAGAATTTAAAAGTCTATATGAAACTGA
TCCTGATTAtatttatttggaaaaaaacataCATGAACAATCATCTGGTG
AAATAAGTATTGATATTTGTTTCCGTGAAAGCCCTATTCCATATTCAACT
AACCATATTGATCTAGTCCAAAATACCCCTGAATGGCAAGAAGCCCGGAA
GTTCCGAATAACTGGTTCTAGGATATCCTCCCTTTTGGGCTTGCACGGTG
AGAAAAAGTTTGTGAGTTGTTGGGATATTGTTCGTGGCGGTAAAACTGAA
AGGAGCTTGAAGGGGATTACTAATATTGAAAGGGGACACTATTATGAAAA
AGATGGTATACAgttctttcaacaaatttccaaaGCAACAGCAGAATCTT
GCGGTTTTTATATTCATCCAACAAATCCACGATTTGGGGCTAGCCCAGAC
GCTCTTGGTCCAGACGGTATCCTTATTGAAATGAAAACTAGAACCGATAA
TGCGGAAAGCCCACTTGAAAGTATGTCTAGTTACCCGAACTACTATTTAC
AATGTCAACTACAAATGGAATGTACCGGTGCACACACTTGTATTCTGGTA
TCTTATCTCCCAGAGAAAGAAACAGCTAATTTCTTTGCTGTAAAGAGAGA
TCAAGTGCTAATGAATATCATCATGGATGTTTGTATGTCGATTTTGAATA
ACGAGCCTTTGGTTGATTGGTATGAAGGCGATGACTTGATTAGAAATATT
GGACTCCAGCTCTTAAATAAACCGTTGAACTTTAACGTGATTAAGCCGTT
AACCAGATATATCAAAGACCAATGTAAGAGCAAAATACAAAGAGTTAATT
TCGTAGATGAGATTGATTTACAAGTCAATAGGCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:199020..200963 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1944:1 |
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