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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:8035..10501- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015944 ID=XLOC_015944|Name=XLOC_015944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2467bp|location=Sequence derived from alignment at sc0000323_pilon:8035..10501- (Clytia hemisphaerica_ch_hm2_pilon)
CGTGAAGTTATCTCTGTTCATATCGGCCAAGCCGGTGTCCAAATGGGAAA
TGCCTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAACCTGACGGTC
AAATGCCCTCAGACAAAACCATCGGAGGTGGAGATGATTCTTTCAATACC
TTCTTCAGTGAAACTGGAGCTGGAAAGCACGTTCCCAGAGCTGTCTTTGT
GGATTTGGAACCATCAGTAGTTGGTAGGTGTATTTTTTAATTTTAAGGCG
AGACCAATTTAATTTGTTGTTCTACGGGCAGATCATTAGCCAAATATGGG
TTGGTCGGTCGGTCGGTAAAATAAGAATAAATTTTTCATTTATCAGGGTT
GGTAAAGTACCGAAAGTGTTTTCTAAAAAATATCTGGATCAAAAATCCAC
TTTTTTTCATCTTCGATGAAGATCATAATAAAATCTTAGTGTATGGAATG
CTAGTCAGAAAATCTCAGAAAATCTGCCGTATACTATCTTTGCTTTCTGA
TTTGAATGATGGCGCTACTTTTTCCCCCATCAGAATTAGTAAAGGCAAAA
AGTAGTTGAGCTCCAGCTCCTGGACTAATGAAATGCTTGATTTTTTAAAC
TCTCAATTTTTAAGTTTCAGCTTTATTCAAATTTGATTCTTACAAATAAC
TAGTGTGTAAAATATATTGTAGTGGAAATTCAATATTTAGGGTCAGTCGG
GGCCCGAAGAAGAACAAATTAAATTGGTCTCGCCTAATAATTTCAATAAA
AATAACTTTTTGATTTACCAAATCCAGAAGTACAGCCCAGTCTGGAAAGA
AAAGAATATTTACGCCAGAGATTTCTTGGCGTAGCCTTTGTGTAAGCCTA
ATCCAAAGTCTGCGCCGGAGATATCCGGTGTACATGCCTTAATTTCCAGA
TTGGAGCTGATTGGAGTACAGCAGGCTGAATTATACGTACTGTATAGTTC
CTGTCTTTTCAAAACTGAAATGTGGAATGCGAGGGTGCTATCAAATTCTG
GCTTTGAAAGCTTGTCTTGCTGAAGGGTGTTTATACCATTTAGCTAGCAA
AAAACTGCCAAATTTAATTTTTTTTCTGCCATTTGCCAAATTTTATGTTG
TCTTGTGCTATTTCTGGCCTTAAAATAGGTTTTTTTTCTTTAATAGGGTT
TTTTGGCTAAAAATATCCTTCATCCAAAGTAAGTTTCTGCCAAATTAAAT
TCCCTTTGAAAACCTTTTGAACATCCGCAAGATTGAATTCCTGCTAAGAT
TTCTTCCCTCAAGGTACCTTATCAGTCTTATTTTTTAGCCCTTTTGACCT
TTTTTTTTTTGGCTTATAGCAGGTTAGGAGCAGGTTTAAAAGGAAGTCTG
AGGTCCCAGGTAACTGTAAGACTATAGTTTAATATGACAAAAAAGATTAA
TGGATTTTATTATAATCTAATTTTTAGATGAAATCAGAACTGGTACATAC
CGTCAACTCTTCCATCCTGAACAACTGATCAGTGGAAAAGAAGATGCTGC
CAATAACTATGCTCGTGGTCACTACACAGTTGGAAAAGAACAGATTGATC
AAGTTTTGGACCGTGTACGAAAACTTGCTGACCAATGTACTGGCCTTCAA
GGATTCTTAATCTTCCACTCTTTCGGTGGAGGTACTGGATCTGGATTCAC
CTCATTGATGATGGAACGTCTCTCAGTAGATTATGGAAAGAAATCAAAAT
TGGAATTTGCTGTGTACCCTGCCCCACAAATCTCAACAGCTGTCGTTGAA
CCATACAATGCTGTCCTTACCACGCACACCACTTTGGAGCACTCAGATTG
TGCCTTCATGGTTGACAACGAAGCCATCTACGACATATGTCGCCGTAACC
TTGATATTGAACGTCCAACATACACTAACTTGAACAGATTAATTGGACAA
ATCGTCTCCTCAATCACTGCTTCTCTTCGATTCGATGGTGCTTTGAACGT
TGACTTGACAGAGTTCCAAACCAATTTGGTCCCATACCCACGTATTCATT
TCCCCTTGGCAACTTACGCTCCAGTCATCTCTGCCGAGAAAGCTTACCAC
GAACAACTCACTGTCTCTGAAATTACCAACGCCTGCTTTGAACCTGCCAA
CCAATTGGTCAAATGTGATCCACGTCATGGTAAATACATGGCTTGCTGTT
TGTTGTTCCGTGGTGATGTTGTCCCCAAGGATGTCAATGCTGCCATCGCT
ACCATCAAGACTAAACGAACCATCCAGTTTGTTGATTGGTGTCCAACTGG
ATTCAAAGTTGGAATCAACTACCAACCACCAACTGCTGTCCCAGGAGGCG
ATCTTGCTAAAGTCCAGCGTGCTGTTTGCATGTTGTCCAACACTACTGCT
ATTGCTGAAGCTTGGGCTCGTTTGGATCATAAATTCGATTTGATGTACGC
CAAACGTGCCTTTGTCCACTGGTATGTTGGAGAAGGTAAGAAACACAACA
GATTTAAGTCTTTTTGA Coding sequence (CDS) from alignment at sc0000323_pilon:8035..10501- >XLOC_015944 ID=XLOC_015944|Name=XLOC_015944|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2526bp|location=Sequence derived from alignment at sc0000323_pilon:8035..10501- (Clytia hemisphaerica_ch_hm2_pilon)
CGTGAAGTTATCTCTGTTCATATCGGCCAAGCCGGTGTCCAAATGGGAAA
TGCCTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAACCTGACGGTC
AAATGCCCTCAGACAAAACCATCGGAGGTGGAGATGATTCTTTCAATACC
TTCTTCAGTGAAACTGGAGCTGGAAAGCACGTTCCCAGAGCTGTCTTTGT
GGATTTGGAACCATCAGTAGTTGCGTGAAGTTATCTCTGTTCATATCGGC
CAAGCCGGTGTCCAAATGGGAAATGCCTGTTGGGAATTGTACTGTTTGGA
ACATGGAATCCAACCTGACGGTCAAATGCCCTCAGACAAAACCATCGGAG
GTGGAGATGATTCTTTCAATACCTTCTTCAGTGAAACTGGAGCTGGAAAG
CACGTTCCCAGAGCTGTCTTTGTGGATTTGGAACCATCAGTAGTTGATGA
AATCAGAACTGGTACATACCGTCAACTCTTCCATCCTGAACAACTGATCA
GTGGAAAAGAAGATGCTGCCAATAACTATGCTCGTGGTCACTACACAGTT
GGAAAAGAACAGATTGATCAAGTTTTGGACCGTGTACGAAAACTTGCTGA
CCAATGTACTGGCCTTCAAGGATTCTTAATCTTCCACTCTTTCGGTGGAG
GTACTGGATCTGGATTCACCTCATTGATGATGGAACGTCTCTCAGTAGAT
TATGGAAAGAAATCAAAATTGGAATTTGCTGTGTACCCTGCCCCACAAAT
CTCAACAGCTGTCGTTGAACCATACAATGCTGTCCTTACCACGCACACCA
CTTTGGAGCACTCAGATTGTGCCTTCATGGTTGACAACGAAGCCATCTAC
GACATATGTCGCCGTAACCTTGATATTGAACGTCCAACATACACTAACTT
GAACAGATTAATTGGACAAATCGTCTCCTCAATCACTGCTTCTCTTCGAT
TCGATGGTGCTTTGAACGTTGACTTGACAGAGTTCCAAACCAATTTGGTC
CCATACCCACGTATTCATTTCCCCTTGGCAACTTACGCTCCAGTCATCTC
TGCCGAGAAAGCTTACCACGAACAACTCACTGTCTCTGAAATTACCAACG
CCTGCTTTGAACCTGCCAACCAATTGGTCAAATGTGATCCACGTCATGGT
AAATACATGGCTTGCTGTTTGTTGTTCCGTGGTGATGTTGTCCCCAAGGA
TGTCAATGCTGCCATCGCTACCATCAAGACTAAACGAACCATCCAGTTTG
TTGATTGGTGTCCAACTGGATTCAAAGTTGGAATCAACTACCAACCACCA
ACTGCTGTCCCAGGAGGCGATCTTGCTAAAGTCCAGCGTGCTGTTTGCAT
GTTGTCCAACACTACTGCTATTGCTGAAGCTTGGGCTCGTTTGGATCATA
AATTCGATTTGATGTACGCCAAACGTGCCTTTGTCCACTGGTATGTTGGA
GAAGGTAAGAAACACAACAGATTTAAGTCTTTTTGAATGAAATCAGAACT
GGTACATACCGTCAACTCTTCCATCCTGAACAACTGATCAGTGGAAAAGA
AGATGCTGCCAATAACTATGCTCGTGGTCACTACACAGTTGGAAAAGAAC
AGATTGATCAAGTTTTGGACCGTGTACGAAAACTTGCTGACCAATGTACT
GGCCTTCAAGGATTCTTAATCTTCCACTCTTTCGGTGGAGGTACTGGATC
TGGATTCACCTCATTGATGATGGAACGTCTCTCAGTAGATTATGGAAAGA
AATCAAAATTGGAATTTGCTGTGTACCCTGCCCCACAAATCTCAACAGCT
GTCGTTGAACCATACAATGCTGTCCTTACCACGCACACCACTTTGGAGCA
CTCAGATTGTGCCTTCATGGTTGACAACGAAGCCATCTACGACATATGTC
GCCGTAACCTTGATATTGAACGTCCAACATACACTAACTTGAACAGATTA
ATTGGACAAATCGTCTCCTCAATCACTGCTTCTCTTCGATTCGATGGTGC
TTTGAACGTTGACTTGACAGAGTTCCAAACCAATTTGGTCCCATACCCAC
GTATTCATTTCCCCTTGGCAACTTACGCTCCAGTCATCTCTGCCGAGAAA
GCTTACCACGAACAACTCACTGTCTCTGAAATTACCAACGCCTGCTTTGA
ACCTGCCAACCAATTGGTCAAATGTGATCCACGTCATGGTAAATACATGG
CTTGCTGTTTGTTGTTCCGTGGTGATGTTGTCCCCAAGGATGTCAATGCT
GCCATCGCTACCATCAAGACTAAACGAACCATCCAGTTTGTTGATTGGTG
TCCAACTGGATTCAAAGTTGGAATCAACTACCAACCACCAACTGCTGTCC
CAGGAGGCGATCTTGCTAAAGTCCAGCGTGCTGTTTGCATGTTGTCCAAC
ACTACTGCTATTGCTGAAGCTTGGGCTCGTTTGGATCATAAATTCGATTT
GATGTACGCCAAACGTGCCTTTGTCCACTGGTATGTTGGAGAAGGTAAGA
AACACAACAGATTTAAGTCTTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:8035..10501 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 229-1266:1039 |
| Aaloc | 4-225:2468 |
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