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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:19011..23757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015943 ID=XLOC_015943|Name=XLOC_015943|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4747bp|location=Sequence derived from alignment at sc0000323_pilon:19011..23757- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAGTTTGGTCGATAAAGTTGATGCCAAAAATATATCAGCTGGAGA
GCTGAATGATCTGATCATGAAAACTTCAAAGCCATTCATCATCACCAATA
GTATTGAACATTGGGAAGCTAGGAAATGGTCATTAACAAATTTTACAGAA
CTGTTCGGTAAAGTACAAACACGATTCAAAATGTACAAAAAGAAAACTCA
CATACGACAGAGCAAACGTCAAAAGATTGGACATGAAGAGTACGTACCCA
TGGAAACTGAATGTGTTTATCAAAATAGCTCCTTTCAAGATTTCCAAGGT
TGGCTGAATGGGAAAAAGAACAGTTTGAGTGAAAAACATCCAAGGTAAGA
GGTTCGTTTCCCATATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCGTCTTCTTCTCTTCGGTATGGAGCTTTCAAAGAGTTTTGGA
AAAATGATTTGAACATTCATCGCGGTCATGACTATAGATTCATGTTAAAA
AGGTTCTCCAGGTTTTCAATAAATGGATCAGATTGGCTCGAATTAACTCG
AAACTATACTGTTGATATCGCCAGTTCAAGCAGATCTTCATCTTTGTAAT
TTGTACTGGTTTTTAGGGAGGAATACTGGTGTTACGCTGATTACAATTAC
ATGGCAGAATTGTTCAACAATGATGAGATGATCTTGAATGCTGTCGATTG
GTCTCCCTTTGGATTCCCACAACGCAACGGACGACAATCGACCATCTGGA
TCGGAAGTGAAGGTTGGTGTATTTTTCGCTATGGATCTCCAAAACTCCAA
AGTGGTTTGAGTACTTTTTCAGGTTTTTCAGTTGAATCATTTGCAAATAG
CTAGTTCACGCCTAGACCTAAAGTACATGTACTCATACATACCAAGCAAT
CCTACTTAAAAATTTGAGAATATTTTTAATATTTGTGTTTTGAGAATGTT
CAAGAAAAGATAATCCATTTCAATGCCTACCTGTTTGTTTAGGAGCTTTC
ACGCCCTGCCACCAAGATACGTATGGATTGAATCTAGTCGCACAAATTGA
TGGTGTGAAAAGATGGCTTCTGATACCGCCCTCTGAAAGAAAACACGTCC
GCCCGCTACGCATCCCATACGAGGAGTCGAGTGTTTTTACAAGGATGAAC
AGCGAGCAGTTAAAAGTAATGGATAAGTGTGTTCAGGTAAGGGTGGACTT
TGGATTGGATTGTTTTTAGTGAATTAATTTTCAAGGTGGCCTTTTTACTT
CAGAGATTATTATCAAAGCAAATTTGATGCCTGTTGTATTTACATGTTAT
TTCAACTTACGTGATAGGCACCTTTAGACCTTTCTTGACGTCAAACTTCC
TTATTTTTAAACGGTGTTCTCCTTTCTTTTGTCAACATGAAGGACATCAT
AGCCCTGTTATTGTTACATAATCTTTTCTAACCATATATTTTCCTGTATA
TTTAATGACGTCATCATAGTATAAGTTGACAGCCACTAATCTGTTGACTT
AGATTTGAATGAATGAAGGTGACGAGGCACTTTACGTACATTCTATGATG
GAGAATTCCGTCACAACTATCTCATGTCTAGGCACTGTCGTCAATAATGT
CGTAAAACCCTGTCAATTCAAATGATTACATTTGATCTTTTGGATGTTTG
AAAAAATTATAGGTTACAGGGTTCAGACAGACCCTGGAAAACCTGGAAAA
CCTGGAAATATGATAAATTTTCAGAAAAATCAGGGAAACTCAGGGAAACT
CAGGGAATTTTATTTTTTGAAGAATGAATGGAAAAACAGATTTAAAAGTT
TTTTTAGTTTTAAAGTGTTTATTCATATGCAGTATTTGTAGCTTTAATTT
TTACCTTAGGTTTACCATTTGATTTGTGTGCCTTTTGTTTAAAGATACAT
CTCTTTTGACTCTGCTTAGTTTTTATGGTTTGCTTGATACTCAGGGAAAA
AAATAGGGGAAAAATAGCTAAAATGAGGAATTTCTCAGGGAAAAAACCTT
TGAAAATTGATTAAAATTCAGGGAAACTCAGGGAATTTTATTTTCGAAGG
TCTGTCTGAACCCTGAGGCACTATCTTTTAAATCTTTTCAACGAGGTAAA
ATAGCAGATGATGAAGCTCATAGAGGATTTTTGACTTGGATTATGAAACA
GGAACGCTATTTCCAAATCACCATAAAACTGATTACATAGTTCCTTCATT
TCAATACACTGTTTTATGCTTCATCCATTCAAACAGCTTTTATTATCGTT
CGAGTTGACACAAATATTTCTTCGTTCTCGTGACTTTTCATGCGAGATTC
GACAAGAGTTCAAAAAGGTCAAATGTCTTGTGAACTTGTCAGTCAAATAA
AACGTGTTTTCATCAACAACATCACACTTTTTCAATTATGATTTCGTACA
CCAGGTTACAAGATCGCAAAATCAACCTTTTTCCTTGCAAATGAACTGAG
TGTAACTGTGTAGGATTAACCATTTAGGCAATGCTTCCTCACGCAAGCGA
AAAATCGCTCTGATGGAAACTTATGAGAACTAAAACACCCTTATGAAACG
TTTCATTTGATACCTCCTTCTCTTCAAAAAATTGCAAAAATGGCCTTTAC
AAAAAGTTCCTTATTATAATTGCTATCAAGGAAGATGAAATACAAGCTAT
AAAACCATTTTGGTTATTTTCAATTCCTTTGCAACTTTTCTTCCTTTAGC
ATACTTTTTATGTGATTGATCTCCTTTAGGTTTATTTGCAACCTGGTGAA
GTATTGGTGGTGCCAAAGCATTGGTGGCATTACGTGGAGAATGTGGTACC
AAGCCTCAGTATCAATACTTGGATAGAACTGGTACTCTTTCTTCATGTTT
TTTATTCATTCCAAAACATTTTGTCGTGCTTTTGTGTACCAGTTGATATT
TTTCGTTTAATAATGAAGAACCAGCTAAGTTGAGCCAAATCGGCTTAAAA
TCAGAAAGTAATATTTTCGCATCCATTTCTGGTTTAGATTATTCTTAGCT
TTAGCCGAACTTGAGGCCAGTGATAAAGTAAGTCTTACTTCAGAAAAGCT
TGTATAAGCCAATTTTGGGCGTCATGATTCTCATGGTTTTGCTTGATTTT
TTTCTTAATTCTCTTTAATTCAGGATTCAGACAAGGTTGACCGAATCGAT
GAGGCTTTGACTCAAACACTGGTGAGAAAATATCTTCTTTGTTTTCATCT
CAATGGGTTATGTTTTTTTTCCTGGCTGCTTTCTTTCTAACTGAGACACG
GTTCGAAATTCTATACCAAACATTTCGCAATGATGAATGATTTTCAGGTT
TTCCAGGCACTTTGTAAATCTTTTAATCCATTCTTTAAACAGTTAAGAGT
CTCTGTAATCTTTTCGTGAAGTTATAAGGTCAAGGTTATGACATTATTTT
TCTTCTACTCGCTCGCCTTTCTCCTAAATTTCCATTACAATTTTTAGAAC
CACTCAATTTTTCTCCTTCTGGCGTCTTGTAAATAATCAACTTGATAATG
TAATCTGAGAGCCAAGCTACCTAACTCTAACACTTTTTGTCGCGACACTG
TAAAAGCTACCGCAAAATTAATTTATTTTTACGTACGCGAAACTGTTTGT
TAGCTTGTTTAACGCATATCGAAAGTCAATCAAATTTTAATACATCAAAG
CGCGGACTTTCAAAACAACCCCTGAGTAATTTGTTCTTGTCGTCTTTGTA
AGCACAAGAGTAATGGAGATAATAAGTAGAGGATGCCATGGGAGTATTTA
GGAGATAATTCCAGACACGAGATTGATATAGTGACTTTCGCATAGGGCTT
CAAGTTACAGTGCGACTCAATAAGGTAAAATTCATGAGCTACTATATTGA
GTCACTATGGGGACGGTTGACCGGATGAATTCGGAAGTTTCAAAAGCAAT
TATTTTCGAGTGCACCACGTTCCCAACTATGCAGGGCCTTTTCTGGTAGA
AATTTGTACCAAGTGGGTGTTCTTTAGAGGTGCAATGAGCAAAGGGTCAA
AGGTGTAAGCGGTTCGAATCTTGCTCCTTCAAATGTCCCTTTACGTTCAG
CCAACCAGTGAACTCCGTTAAAACAATCGAAAGACTGTCTTAATTACCTG
GCTATCCTTAAATATAGACTAGCTAAAAAACAACTAACCTACCCCAGAAA
TAGAAAACATCACCAAGATGTCAAAAGGGACCAAAAAAGAGGTGGCATTC
TGTAGAAAGCTGTAGCTTTGTTGATGGTCGAAAGCTATTCAGTTTTGCTG
TTTGTTTTGGTGGGTACGAGATTAGAGCAATAAAGTGCTTGGAAAACATG
ACCACAACTTTTAAGAGTCACTTCCTTCTCTCTTTCTGGAAATAAACAAC
AACACCAACAACATTCTCTCGTTGTAGGTTTATACATTCGACAAGTCCAA
TGACTCTGAGAGCAATGACTGGATAAACCCAGGACAAGTAAGGATGTATC
TTCTATTTGGACATTATTCCTTCTATGCCATAAGTCACTAAGTTTTTTTG
CCGAAGTTGCTGTGAGGGTTCACTAAACGTTTTGGAGACTTGAAGTTTTA
TATCCATCTTGAATATTTTCCAGGAGCTACCTTCATCATTAAAGGACTGC
TTACATTACGTGGAGATGACAATCAAAGATGGTTTGGGGATTGAAGATAT
ACACGTGACACCTGAGTTGCTGATCAATTGCTTGTGCGAAAAGGATGTGC
TGCAGAAAGTGACCGAGAAAATTGTACAACGCGTTAAAGATTCCTGA Coding sequence (CDS) from alignment at sc0000323_pilon:19011..23757- >XLOC_015943 ID=XLOC_015943|Name=XLOC_015943|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000323_pilon:19011..23757- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAGTTTGGTCGATAAAGTTGATGCCAAAAATATATCAGCTGGAGA
GCTGAATGATCTGATCATGAAAACTTCAAAGCCATTCATCATCACCAATA
GTATTGAACATTGGGAAGCTAGGAAATGGTCATTAACAAATTTTACAGAA
CTGTTCGGTAAAGTACAAACACGATTCAAAATGTACAAAAAGAAAACTCA
CATACGACAGAGCAAACGTCAAAAGATTGGACATGAAGAGTACGTACCCA
TGGAAACTGAATGTGTTTATCAAAATAGCTCCTTTCAAGATTTCCAAGGT
TGGCTGAATGGGAAAAAGAACAGTTTGAGTGAAAAACATCCAAGATGGAA
AGTTTGGTCGATAAAGTTGATGCCAAAAATATATCAGCTGGAGAGCTGAA
TGATCTGATCATGAAAACTTCAAAGCCATTCATCATCACCAATAGTATTG
AACATTGGGAAGCTAGGAAATGGTCATTAACAAATTTTACAGAACTGTTC
GGTAAAGTACAAACACGATTCAAAATGTACAAAAAGAAAACTCACATACG
ACAGAGCAAACGTCAAAAGATTGGACATGAAGAGTACGTACCCATGGAAA
CTGAATGTGTTTATCAAAATAGCTCCTTTCAAGATTTCCAAGGTTGGCTG
AATGGGAAAAAGAACAGTTTGAGTGAAAAACATCCAAGGGAGGAATACTG
GTGTTACGCTGATTACAATTACATGGCAGAATTGTTCAACAATGATGAGA
TGATCTTGAATGCTGTCGATTGGTCTCCCTTTGGATTCCCACAACGCAAC
GGACGACAATCGACCATCTGGATCGGAAGTGAAGGGAGGAATACTGGTGT
TACGCTGATTACAATTACATGGCAGAATTGTTCAACAATGATGAGATGAT
CTTGAATGCTGTCGATTGGTCTCCCTTTGGATTCCCACAACGCAACGGAC
GACAATCGACCATCTGGATCGGAAGTGAAGGAGCTTTCACGCCCTGCCAC
CAAGATACGTATGGATTGAATCTAGTCGCACAAATTGATGGTGTGAAAAG
ATGGCTTCTGATACCGCCCTCTGAAAGAAAACACGTCCGCCCGCTACGCA
TCCCATACGAGGAGTCGAGTGTTTTTACAAGGATGAACAGCGAGCAGTTA
AAAGTAATGGATAAGTGTGTTCAGGAGCTTTCACGCCCTGCCACCAAGAT
ACGTATGGATTGAATCTAGTCGCACAAATTGATGGTGTGAAAAGATGGCT
TCTGATACCGCCCTCTGAAAGAAAACACGTCCGCCCGCTACGCATCCCAT
ACGAGGAGTCGAGTGTTTTTACAAGGATGAACAGCGAGCAGTTAAAAGTA
ATGGATAAGTGTGTTCAGGTTTATTTGCAACCTGGTGAAGTATTGGTGGT
GCCAAAGCATTGGTGGCATTACGTGGAGAATGTGGTACCAAGCCTCAGTA
TCAATACTTGGATAGAACTGGTTTATTTGCAACCTGGTGAAGTATTGGTG
GTGCCAAAGCATTGGTGGCATTACGTGGAGAATGTGGTACCAAGCCTCAG
TATCAATACTTGGATAGAACTGGATTCAGACAAGGTTGACCGAATCGATG
AGGCTTTGACTCAAACACTGGATTCAGACAAGGTTGACCGAATCGATGAG
GCTTTGACTCAAACACTGGTTTATACATTCGACAAGTCCAATGACTCTGA
GAGCAATGACTGGATAAACCCAGGACAAGTTTATACATTCGACAAGTCCA
ATGACTCTGAGAGCAATGACTGGATAAACCCAGGACAAGAGCTACCTTCA
TCATTAAAGGACTGCTTACATTACGTGGAGATGACAATCAAAGATGGTTT
GGGGATTGAAGATATACACGTGACACCTGAGTTGCTGATCAATTGCTTGT
GCGAAAAGGATGTGCTGCAGAAAGTGACCGAGAAAATTGTACAACGCGTT
AAAGATTCCTGAGAGCTACCTTCATCATTAAAGGACTGCTTACATTACGT
GGAGATGACAATCAAAGATGGTTTGGGGATTGAAGATATACACGTGACAC
CTGAGTTGCTGATCAATTGCTTGTGCGAAAAGGATGTGCTGCAGAAAGTG
ACCGAGAAAATTGTACAACGCGTTAAAGATTCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:19011..23757 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 895-1068:175 |
| Aaloc | 835-894:371 |
| Aaloc | 787-834:1625 |
| Aaloc | 685-786:2019 |
| Aaloc | 493-684:3754 |
| Aaloc | 346-489:4131 |
| Aaloc | 1-342:4748 |
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