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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:189133..191026+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015560 ID=XLOC_015560|Name=XLOC_015560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1894bp|location=Sequence derived from alignment at sc0000124_pilon:189133..191026+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGACCCAAACACGTCAGAAAGTGGTGAAACTCGTGTTGCCTCAAG
ACAAAATACAGATACTTCTGTGGCTGAAACCGATCCAAATGTCCAGCAAA
ATGGggatcaacaacaacaacaaccccCAAGAGTCGGTTTGGAAAACTGT
TATTACGAGGATTGTTACTTTTTGGATTATTATGCAAGTTGTAAAATCTT
TCACTGGACAGAAAGGAGCGACTTCTCCAGACTCACCATCATCGGCATCT
GGAAATGTCAAAGGTAACAATCAGCCATGCTcgaatcttttcaaaacaaa
tgatcaCCTTGAACTTTATCTTTACTACTCTGAGAAAGAAGACTTCACTT
CATTTGATGCAAAATCTTTGTTGTGGCACCAGGGCGATATCAAATTTGGT
AGCTGGTATGATGGCCCAGATAGAGATGGTTCCCGCAAGAAAACCGGAAA
AATCCAAGCCTCTGAGTCTTTAATGAACAATGGTAGCTTGTACTATCATA
TCTTTGTTGTTAAACAAGGATCCTCACCTGATCCGCGGTCAAAGTTCTAC
GATAAGTACTCAGTTTCAAGCCAAACAAAGTTGATGACATCTTTTCGGAA
AGAAAGAGTTCATAAAACCAAGAACCTTTTAACTGGAGCAGCAGACACAC
AAAATAAATTGGTCCAAAATGACACAAAAGCACCATTAAAAGTCATATCA
TTCTGGCATCCTAACTTGACCATCAGTCTTTTGGATGATCAAACACCATG
GCCAAAAAATGGTGTTCCGCAGCCTCTTGATCAATATATCAAGTTTGATA
ACATTCAAAATGTCTATTTTCCAGTTGTCTATGTGAATGACTATTGGAAT
TATGTTAGTGACTATATGCCAATCAATGATACAACACCTGAGCTAGAGTT
TCAAATAACTTTTGCGCCCATTTCCATGTTTAAATGGCAACTCTACATAT
CACAGTCTATGCGATCTCAATGGAACCAATATCTTGGTGACACTGCTGAA
CAGTCTGATCAAGAACAGGATATGATTAAAAGAATTTTGCGAGAAACAAA
TCCTTACCTCCTTGCCCTAACAATGATTGTCTCTTTGGTTCACAgtgttt
ttgaatttcttgCATTCAAAAATGATATTCAATTTTGGAAGACACGTAAA
TCGCTTGAAGGACTATCAGTACGATCTGtgtttttcaatgttttccaAAC
CCTTGTTGTGTTGCTCTATGTGTTTGACAATGAAACAAACACTGTTGTTG
TTATCAGCTGCTTTGTTGGCCTGATCATTGAATGTTGGAAAATAACCAAA
GTTGTTGATATTGGCAGAGACCCTGACCGAAAATGGGGACCTTTCCCTGC
AataaaatttgaagataaatCTACATATGTGCAATCTGAAACAAGAGAAT
ATGATAAGCTGGCATTCAAGTATCTCTCATGGGGGTTGTTTCCATTACTT
GCTTGCTATGCAGTTTACTCGTTAATCTATGTTGAGCATAAAGGGTGGTA
TTCATTTGTTTTAAGCATAGCCTACGGTTTTCTCCTCACGTTTGGTTTCA
TCATGATGACACCGCAGTTATTCATTAATTACAAGATGAAAAGTGTCGCT
CATCTTCCATGGAGAATGTTAACCTATAAAGCTTTGAACACTTTTATCGA
TGATATCTTTGCTTTTGTTATTAAAATGCCAACCCTGTATCGACTGGGTT
GTCTACGTGATGacatcattttctttatttatttgtACCAGCGTTGGATT
TATAGAACAGACATGTCTCGTGTCAATGAGTTTGGAACATCTGGTGAAGA
ACCAACAGAAACTGAAAAGAAAGATGAAACCCAAGAAGCAATTGCTCCCC
ATGACGAACAAGAACAAAACACTGAAACCAAAAAAGACCGTTGA Coding sequence (CDS) from alignment at sc0000124_pilon:189133..191026+ >XLOC_015560 ID=XLOC_015560|Name=XLOC_015560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3788bp|location=Sequence derived from alignment at sc0000124_pilon:189133..191026+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGACCCAAACACGTCAGAAAGTGGTGAAACTCGTGTTGCCTCAAG
ACAAAATACAGATACTTCTGTGGCTGAAACCGATCCAAATGTCCAGCAAA
ATGGggatcaacaacaacaacaaccccCAAGAGTCGGTTTGGAAAACTGT
TATTACGAGGATTGTTACTTTTTGGATTATTATGCAAGTTGTAAAATCTT
TCACTGGACAGAAAGGAGCGACTTCTCCAGACTCACCATCATCGGCATCT
GGAAATGTCAAAGGTAACAATCAGCCATGCTcgaatcttttcaaaacaaa
tgatcaCCTTGAACTTTATCTTTACTACTCTGAGAAAGAAGACTTCACTT
CATTTGATGCAAAATCTTTGTTGTGGCACCAGGGCGATATCAAATTTGGT
AGCTGGTATGATGGCCCAGATAGAGATGGTTCCCGCAAGAAAACCGGAAA
AATCCAAGCCTCTGAGTCTTTAATGAACAATGGTAGCTTGTACTATCATA
TCTTTGTTGTTAAACAAGGATCCTCACCTGATCCGCGGTCAAAGTTCTAC
GATAAGTACTCAGTTTCAAGCCAAACAAAGTTGATGACATCTTTTCGGAA
AGAAAGAGTTCATAAAACCAAGAACCTTTTAACTGGAGCAGCAGACACAC
AAAATAAATTGGTCCAAAATGACACAAAAGCACCATTAAAAGTCATATCA
TTCTGGCATCCTAACTTGACCATCAGTCTTTTGGATGATCAAACACCATG
GCCAAAAAATGGTGTTCCGCAGCCTCTTGATCAATATATCAAGTTTGATA
ACATTCAAAATGTCTATTTTCCAGTTGTCTATGTGAATGACTATTGGAAT
TATGTTAGTGACTATATGCCAATCAATGATACAACACCTGAGCTAGAGTT
TCAAATAACTTTTGCGCCCATTTCCATGTTTAAATGGCAACTCTACATAT
CACAGTCTATGCGATCTCAATGGAACCAATATCTTGGTGACACTGCTGAA
CAGTCTGATCAAGAACAGGATATGATTAAAAGAATTTTGCGAGAAACAAA
TCCTTACCTCCTTGCCCTAACAATGATTGTCTCTTTGGTTCACAgtgttt
ttgaatttcttgCATTCAAAAATGATATTCAATTTTGGAAGACACGTAAA
TCGCTTGAAGGACTATCAGTACGATCTGtgtttttcaatgttttccaAAC
CCTTGTTGTGTTGCTCTATGTGTTTGACAATGAAACAAACACTGTTGTTG
TTATCAGCTGCTTTGTTGGCCTGATCATTGAATGTTGGAAAATAACCAAA
GTTGTTGATATTGGCAGAGACCCTGACCGAAAATGGGGACCTTTCCCTGC
AataaaatttgaagataaatCTACATATGTGCAATCTGAAACAAGAGAAT
ATGATAAGCTGGCATTCAAGTATCTCTCATGGGGGTTGTTTCCATTACTT
GCTTGCTATGCAGTTTACTCGTTAATCTATGTTGAGCATAAAGGGTGGTA
TTCATTTGTTTTAAGCATAGCCTACGGTTTTCTCCTCACGTTTGGTTTCA
TCATGATGACACCGCAGTTATTCATTAATTACAAGATGAAAAGTGTCGCT
CATCTTCCATGGAGAATGTTAACCTATAAAGCTTTGAACACTTTTATCGA
TGATATCTTTGCTTTTGTTATTAAAATGCCAACCCTGTATCGACTGGGTT
GTCTACGTGATGacatcattttctttatttatttgtACCAGCGTTGGATT
TATAGAACAGACATGTCTCGTGTCAATGAGTTTGGAACATCTGGTGAAGA
ACCAACAGAAACTGAAAAGAAAGATGAAACCCAAGAAGCAATTGCTCCCC
ATGACGAACAAGAACAAAACACTGAAACCAAAAAAGACCGTTGAATGGCG
GACCCAAACACGTCAGAAAGTGGTGAAACTCGTGTTGCCTCAAGACAAAA
TACAGATACTTCTGTGGCTGAAACCGATCCAAATGTCCAGCAAAATGGgg
atcaacaacaacaacaaccccCAAGAGTCGGTTTGGAAAACTGTTATTAC
GAGGATTGTTACTTTTTGGATTATTATGCAAGTTGTAAAATCTTTCACTG
GACAGAAAGGAGCGACTTCTCCAGACTCACCATCATCGGCATCTGGAAAT
GTCAAAGGTAACAATCAGCCATGCTcgaatcttttcaaaacaaatgatca
CCTTGAACTTTATCTTTACTACTCTGAGAAAGAAGACTTCACTTCATTTG
ATGCAAAATCTTTGTTGTGGCACCAGGGCGATATCAAATTTGGTAGCTGG
TATGATGGCCCAGATAGAGATGGTTCCCGCAAGAAAACCGGAAAAATCCA
AGCCTCTGAGTCTTTAATGAACAATGGTAGCTTGTACTATCATATCTTTG
TTGTTAAACAAGGATCCTCACCTGATCCGCGGTCAAAGTTCTACGATAAG
TACTCAGTTTCAAGCCAAACAAAGTTGATGACATCTTTTCGGAAAGAAAG
AGTTCATAAAACCAAGAACCTTTTAACTGGAGCAGCAGACACACAAAATA
AATTGGTCCAAAATGACACAAAAGCACCATTAAAAGTCATATCATTCTGG
CATCCTAACTTGACCATCAGTCTTTTGGATGATCAAACACCATGGCCAAA
AAATGGTGTTCCGCAGCCTCTTGATCAATATATCAAGTTTGATAACATTC
AAAATGTCTATTTTCCAGTTGTCTATGTGAATGACTATTGGAATTATGTT
AGTGACTATATGCCAATCAATGATACAACACCTGAGCTAGAGTTTCAAAT
AACTTTTGCGCCCATTTCCATGTTTAAATGGCAACTCTACATATCACAGT
CTATGCGATCTCAATGGAACCAATATCTTGGTGACACTGCTGAACAGTCT
GATCAAGAACAGGATATGATTAAAAGAATTTTGCGAGAAACAAATCCTTA
CCTCCTTGCCCTAACAATGATTGTCTCTTTGGTTCACAgtgtttttgaat
ttcttgCATTCAAAAATGATATTCAATTTTGGAAGACACGTAAATCGCTT
GAAGGACTATCAGTACGATCTGtgtttttcaatgttttccaAACCCTTGT
TGTGTTGCTCTATGTGTTTGACAATGAAACAAACACTGTTGTTGTTATCA
GCTGCTTTGTTGGCCTGATCATTGAATGTTGGAAAATAACCAAAGTTGTT
GATATTGGCAGAGACCCTGACCGAAAATGGGGACCTTTCCCTGCAataaa
atttgaagataaatCTACATATGTGCAATCTGAAACAAGAGAATATGATA
AGCTGGCATTCAAGTATCTCTCATGGGGGTTGTTTCCATTACTTGCTTGC
TATGCAGTTTACTCGTTAATCTATGTTGAGCATAAAGGGTGGTATTCATT
TGTTTTAAGCATAGCCTACGGTTTTCTCCTCACGTTTGGTTTCATCATGA
TGACACCGCAGTTATTCATTAATTACAAGATGAAAAGTGTCGCTCATCTT
CCATGGAGAATGTTAACCTATAAAGCTTTGAACACTTTTATCGATGATAT
CTTTGCTTTTGTTATTAAAATGCCAACCCTGTATCGACTGGGTTGTCTAC
GTGATGacatcattttctttatttatttgtACCAGCGTTGGATTTATAGA
ACAGACATGTCTCGTGTCAATGAGTTTGGAACATCTGGTGAAGAACCAAC
AGAAACTGAAAAGAAAGATGAAACCCAAGAAGCAATTGCTCCCCATGACG
AACAAGAACAAAACACTGAAACCAAAAAAGACCGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:189133..191026 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 124-1893:125 |
| Aaloc | 1-123:1 |
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