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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:143460..151969+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015275 ID=XLOC_015275|Name=XLOC_015275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8510bp|location=Sequence derived from alignment at sc0000408_pilon:143460..151969+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAAGACGTTATAC
AGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGTGGTGAGAGTG
TACAAGACTGGTATATTAACAAGACTACAGGATTATGTGAATGCATGAGA
AACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTGTTAG
AAGCCAATCTGCTTGCCAaggtttgtcatttttttcatatGTATATTTGG
GTATGTAGATAATATTGCTAGGAATTTGACCATCCTTTAACCCCTTCAGT
ACTGCCCAgataaattttcttcatttataaaggaaaaaactttaattgag
aagttttgaaagaaactttcaACTTCAATTTCCAGACTTAAGGGGTTGAC
TATAAATCTGACTCCTGACCATAAATAAGATTTAAAAGGGCATTTTTAAA
CGCTGCTTTGTAAAAGAGTATGAAACTACCTttggtaccaaaaccattgt
CTAACTCAAGTCAAgttcagtagcgtggtgggtcgattAAACCTAGGGAG
GTAATTTTAGAAGATTTAGATTTTGGCGCCcctatgaaaagtaaatatta
ttaaaaaaaaaaacgcgagCGAAGCTAGCACGAAAACTGttgggtatttt
ctctctttttggccaaaaactgccATAACTAAAGTGTAAAAGAGaaaagg
ggcgccgaaattagtaattaGAGGTGTCTTTTTGCAACCTTTGTATTTCA
GCGCCCCTTTGAAAAACCTCCACTAGGGGAGGGGGCATTTGCCACCTACC
CCCCTCCCTGCCACCATGCTACTGGTCaagttacaagcttttatgccaat
ttgacgttttggctttcaaattttttctcacattttttaaaaaatgctgc
gcgctggaaaggctaaagattaatattttttcaagatggataaagaataa
aaagaaacggTCACACATGATTACTTACTTTTGAATAGTTATGTTACAAA
ATCTAAACGTAATTATGTTTAATTAGTATCGCATCATCATCATGCCGATT
TTTAATCTGAACGGGTTGTTTGAGATTAACATTTTctgaaatctttcttt
ttctcaaTAATCGACTCTAAATATACCATAACACTGTGATTAAAGTGAAT
TTCAGAGACTGTTGATGGTGCAATATTTCTATTGAAGGCTATTTCTATTG
CTTTCTTTCACGTACAATAAAATATTACTTAGACAATTAAATTTAAAGTA
CTATACAATATTAGTCAAGAAATATAGTCCTAAGTAAGAGTCTTGAAATC
CTACATAGAAATGTTTGAGGCCAAATATTGACCTGTGAGGACAAATCGAG
ATTGTATTCACCATTTCTttcagtatttttgtgcaatagacgatatcggc
tttccgaattctccctgAATGATTACCAATGATGCAGAAATGCacggaaa
gtcaatatcgtccgtgaatttttttgcgcaatgcatcatgggtaatcatt
cggggagaattcggaaagccgatatcgtctatttgtttaaaaatttggGT
TCTTTAGAGTTttcaaagccttgaaatgttcttaacttgtttttgatatt
ttggacATTGAAgctttgtgttcttataaaaaatacgtgTAGATTTGAAG
GGATGGGAAATTACAGGTTTCGTTAGGTTTGGCTAGGTTTGTTGCaacaa
aactaatgaaaaaattaaactgtaaaggcttggggacacgagaagttttt
tcccGTTGGTACAATACAAAATGCTTTATCCCAccaatactctcgggtac
ttaatagccgtcccccccgctaattaatttttcgaaaattttccacccag
gacattcttattccaacccccccgcttattaatttttgggaaaatgtttt
tgaaagttcccttttttgtcctaattcagctgtattagcctccttttcaa
aaattttccacccaggacatttttattccaacccccccgcttattaagtg
ttgagattttttccaacccccccgcttattccaacccccccggctattag
gtacccgagtacaagaaaaaaagtgcgtgtctcatggtttttttttttgt
ttcacgagacaaaaagtgagggaaatacccgaAAAGaaacgctgattttg
tccctgggacaataaaattttgtcaattggacaatccattgtcccaggga
cagaagtgagatttcacttttattggtaaaaagaaaaatggggcaGAGAC
ACGAGAGCAtcgcaccaacgcgaaaaaaacttctcgcgtgtccccaagcc
ttaactaTTTCAATTTCTATGACAATTTTAAACTTTCTCGGCTTTAGAAA
AGCAACTTAGGTCAAGTTGGTTCACGGGAGAGCTCATTTCATCGTATCAG
ACCTTTTTAATTAGGTGAGATCATGAGATTTGTCTGGGTGGTATATGTAA
AGATTTAAAATTACTTTGAATTGAAAGCAAAACGTTTCGTAATTCTGCAA
ACCTTAACACAAAAAACTCCCAACATAttcgaaacaaaagaattgtaTTG
AAGGAAATCAGATTTGTTTGTTTACAATCCGTTAAACGGAGCTAGACAAT
TTTATCTGGCACCTCGGCAATACTAACGTGTAATTAGCGGACCCATGGTA
ACATATAATGAAGTCAGCAACTATTGTTATATAAGAATAATCGTAAGTCT
ACACTTCCCAACTTTTTTAAGCTGAAAATACATTCGATATAAGCAAGTGA
AGCTTGAtttcataaaacttgttcgTTCTTTAAAGAATGACTCTTATCGT
AgaacaaataaacaaaagtcTCGAATGACTCCGTAACTAGAACAACTCTT
AGGTCCCCTCAGTGAACAATgtctttataaaccttactccataactcgaa
atttccttaactcgaacatatTTGCGTTCCCCTGACCGCCATTTTACAAC
GTGAAAGGACTGACACTGGGTACAGAGATTGATTAGTAAggtagtacacg
tttttttataagaacaaactatataagaacataacgcttcgatggctaaa
atgttaagaacaagttaggaacattttaaggcttcgcggactcgaaaaca
gctaatttcttaggaaaatggacaaaaatacatagaaagtggggaaaata
agaaattttttaggcttgaaactcaaaaagttaagaacatctgtaggctt
caaaaattttaaatgttcttataaaataaacgtgTAAGTTTCAAAGCCAA
TAGGTAGTTTCTCTAGACGTATCTTTTGAACCAAAGACAATGGCGATGGT
ATTTCCCTTTTCCTTCtcgggaaaaaaatattttatacatGCAAAGACTT
TTAGGAAGATTAAGAACTATATCCCTCATCTTTCTCGGAAACGAAAGATT
TCAGACATTCCAAGGCTTTTAGAAAGATGAAGAGctaatgaaaaatatat
caacTAAGCGATAAGCTTCTTATGtcttatgatttttttacagCATTATT
TAAACTTTTCGTTTAACGGAATATTGGCCTCATTTTCAAATAGCTTTTAA
TCATGTGATACGTGTCTGACGAATGGAAAATCTGATAACTAATGACTTCC
TGAAAAAAGCTTTTCACCTCAACGAAAACGAgcattgaaacttttttgaa
caCGATGAGGAAGAAGAATTTCTCTTTGTTTATTGCATATTGCAACACGT
GCTTCCTCCGTCGCAAATCGCGAACAAACCCAGGTTTAGAAAACTCTAAA
CCTAACTCTAACACCAAAATCAAACTATTCTcacacctctgtctcacagc
cccggtggaacttttttcctcagtggggataaagattcctattgaaatct
caatggggatagaaattctattgttccaaggatggttttggagtgcagtt
tTTAAGCATGGAATTTCgcatggggatgaaatcaaagtcaatttcccagt
tgtGCTGAAAatcaagggtattttcccagcggggacgaaatttttgccta
ATTCTCCAGGGGGCTGGGgtcccaatgggtctgtgacacaaaaaaaaaca
tctaaagAGTCTCATTCTCATAATTTTAAAGTTcagtatgtatgtaatag
tttatttcaagttgacgaacagtGAATAAACTTCGAAAAATACCGTGTCA
GCCTGCAATACCGGATCAGCTATTTCATTAcgtcaaaaaaattatcttta
gtCAATCAAGTGCCACgtattctgaaataaaaaattacgtcattgtgcaa
aaaaaagacCCAGTCACGCAGTTTGGGGGCCTTTTACATGTTAGGCTGGT
GAGTTTAACAGAGAACACCCATTTTAAAGTctcggtgggggggggggtac
ttaggcagaatgggtgccaggtatgtgcgagccataagggtctcATTTct
acaccctcgaaagtctctcaaagagGCACAAATACCATTAAAAAAGAAct
ttgagaaaagtctctctaagggtgtcAAATACGCTAACTCTTCCTCTCTC
TAAGGAATGGTTTTCGATTTTTGGTTCGTCTTTGGTCAAAGCCATTTTTA
CAAAGCAAAAGTCATGCACGTGGGTTTTCCCATTTTCCATTTTCCGAATG
CCAAATGTAAGAGGATACCAGCATTTAACACGTAGTTCAAAACATACACC
AAACGAGCTACAGTCtctattttgatgttttatgatttcctTTTTCGTGT
TTGACCTCatccaaaacattcgaaaacataaaacaatttAGATATCCATA
AGGATATATTTCATTTTCCGATTCCTTTCTGGCGAATTGCCAAATGTAAT
GATTTGATACATAATTGCAAGATAATAGGGGTTTTCTCTATTTTCGTTTG
CTCTCATGCTACTAGCCttgccaaaaaaaactttttaaagaaagaaaaaa
tacacGAATTGTAGCATCAATGAGTTGGAGGAACCGACGCCTAAACAAAA
CCATTCATTGCTAATATCTTGTGCAACATAGAAATAACAGCAATCATAAT
TTATAATCACATTTTATCTTCAGATTGCACTCAAGTCATGAATAAAAACT
ACCCTGTCCAAGAATTTACTGGAGAAATTAAAGTCGACAAAACACCTGCC
AACTGTTTCAGTGGAGAAAACGTTTTAACAGAACCAATCACTTTCATGTA
TTTTCGACAATTCGAATGGATCGCCGAAAAAACGTTTATCACCAAGATCG
AAGATTACCATGCACTGGTAAGTAAAGATCccatctggcacacaacgttg
ttttaacgttcaaataacgttatttagacgttatgaatgtcacatggacg
ttgatACGACGTAGAGTGTTGTCTGGGTTATAAAACAAGGTTTATTATTG
ACTTATCGGTTGAtaagaaaaactaaatttagtaccttatcggccataTT
TACGCCGTCTCTAATTTATCGCCAACCCCTTTTACGCCTACCCCCTATTA
CAAAAAAGCTCAATCTTTTCCAATTGTTGCCCTGCCCTAATTTAATTCCG
ATCCCTTACGGCGGCCCTTCTTACGCCAGTGACGAAAagataacgccaat
aagggccagCGTAAAAAGGCCGATGAGATATTCATTATTCagctaaattt
tcacaaaaagtttttgtgggttttgttttatttacaatctcggtcaaaat
aaattgagaattttggctaattcctcgttttcagcaatttaaagttcggg
agaaaaagtcgcttttggggaaattgataaatttattcaaatatttcaat
tcgggaggggtttatagacttcaaggctatattctgagccctatcgGACG
ATTCTTGGACTTTTAGTCTaagtcctaagtcttaagtctagcgttaaaac
tcagagttaaaactctagcCGTCCAActtaatttagagcgcttccaaatg
gtttttggttgtaagatttcgtgggaatttcccttttttctcaaatatta
tgactttgattgttaCCGTGAAacgcacaggtcaaaatcacatattgacg
ctgtgccgacgaatcgagattctattcattgcgcaatcaacgaagacaaa
agtaaccatgacgaccatccaagatcttggatgaggttcaaagttgatat
ttttattcccatcgttgaaaacacaacaacaaaagcgacaaaataaaaaa
tcaaactttgaaagcaaaatttgaaaaaaaattctaccgtggtataatag
ccatggtatatcaggaattattcaatggctgtttttgactacaggtatat
aataataaacgaaaacctattgaatatatgttttattatatacctagagg
caaaaacaaaacattaattatgtCGATAGTTAAATGTTTCacttaaaaca
ctcccataatcgaacgttcgaacgtttttcttttttaatgattttcttaa
ttactttgagtcattAAATTTGTTCATGAgattgacaatagatttatttt
aatgaatttctttgataacaacaaaagcgacaaaataaaaaatcaaactt
tgaaagcaaaatttgaaaaaaaattctaccgtggtataatagccatggta
tatcaggaattattcaatggctgtttttgactacaggtatataataatta
ctgttatacatttggggatcatgtaaaagatttctttcgaaagaaactca
cttcgattacacatggaggtttctggggaattcgtaaatagtaaactgca
tactgcccgggggggttacttaggcaaaatgggtgccgggtatgtgcgag
ccaaaagggtaccttttctcattcctcaaaagtctctcaaaggggtacaa
attcaaaagttagtctctgaaagggtcccaaaatcacaaaaattaaaaat
ttctctctcaaagggtcacgatttccaagaattttgaccaaaatttggtg
aaaatcaaaccaaaatttggaaaaaatggaccaaaatttaggaaaaagtc
tctcaaagggtcccaaaatcaccaaaattttgtctctcaaagggtcgatt
ttcgattttcggctcggacatacccgtcacctcgcaaacctagtaccccc
ccccggggcatactgatacagtctgctagacattaatgaggtaatatttg
ctcttcatctttgattctttctacagtgattagattgacacatgcgcgat
aaaatttctattattggtcttcagaggttaatatattctttgaaaactta
acctctgatactcagggtatttGATTAGATTTGAATTTCTTATAGTACTT
GACATAGATTTTCGCCAAAAGAATATACCTATATATATCTTTAGATAATC
TTCATTCTCGTTTTTTATGCAAGACCCTTTAATTTCTTTCAAGAATCTTG
CCAAGATGTTACATCTTGAtcatttttagatatttgaagtactttcaaga
ttttatcaagaatttttatttcttgCTATAAATTAAAACTCGAAATAACA
TATATAATTCAtcgatttttcattaaattttagaTCAAACTACCACTCAG
TACCCCCGCTGGTCACCTCAAAGGACATTTTATCAAACTGGAGATAGAAT
GCGAGGGGAAAATTGAACGTTTGTTTACCAAGCTAGAAGGCGTCAGTAAG
TCATAAACCTTGaagtttatttttgaatataaaGACATTTCTGAGTTACT
GTATGTCTTTTTGACTTACTAGAAATGTAGATTCGAATATTGTCCATGGA
AGGCTGAAAgataaatcaaattttattaGAAAATATATTCAAGTCCTGTT
GCAAACGGCAAACTTAAAAATATATGAATTCCATTTCCCATGGTTTTTTA
GCTTCTTCTCAAAAGGCCTAACAAAGAGccttcagcaaaaatttccatca
CCCTCTGGATCTTACGAAGTACATATGTTCTGGACAtgtcaatttttctt
gtttagtGGGCCATTTAATTGTCCCTTTTCTAagtctcaaaattttcttt
tttcagtgaCCATCACAGATCCTCTAGCAGTCAACTCAAAGATCACACCG
AAACCTCCGATCACCAACGGGACCTCAACAACAACCACTACAACTAAATC
ACCGACCACCCTTCAACCTAATATAAACAACACTGTAACCATAACCAACG
GAAATGCAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATACTCTT
CAACCTCCGAGAAATGAAACAATAAACACACAAATAATAACTACAGAATC
GGTGATCAAAGAaaccccacatacaacacattcaacaacaatcaaaccaa
acaattcaccaagacttccaacaaccaaaaacacgacaacTGTTATTACT
CCAAAAAATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTACCTTC
CGAAGCAAACGCAACAGAATCACCGAAAACAACAAGAAGAAGAGCTAGAA
CAACCCCTCCCCGAccaaataaaccaacaactcccacaactccaaactgg
cttataaaaacaaaaacaaacgcgacaaagtccactcttcgcaacacaaa
aacaaaagag Coding sequence (CDS) from alignment at sc0000408_pilon:143460..151969+ >XLOC_015275 ID=XLOC_015275|Name=XLOC_015275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2160bp|location=Sequence derived from alignment at sc0000408_pilon:143460..151969+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTACAAGTGTAACATGTAATACATGGGTTATTGAAAGACGTTATAC
AGGAGATATAATACGTAATATACCAGCGAATTTTAAGTGTGGTGAGAGTG
TACAAGACTGGTATATTAACAAGACTACAGGATTATGTGAATGCATGAGA
AACACACCGACATTTGTCGTTTATGGTGATGGAAGCTTTGGTTGTGTTAG
AAGCCAATCTGCTTGCCAagATGATTACAAGTGTAACATGTAATACATGG
GTTATTGAAAGACGTTATACAGGAGATATAATACGTAATATACCAGCGAA
TTTTAAGTGTGGTGAGAGTGTACAAGACTGGTATATTAACAAGACTACAG
GATTATGTGAATGCATGAGAAACACACCGACATTTGTCGTTTATGGTGAT
GGAAGCTTTGGTTGTGTTAGAAGCCAATCTGCTTGCCAagATTGCACTCA
AGTCATGAATAAAAACTACCCTGTCCAAGAATTTACTGGAGAAATTAAAG
TCGACAAAACACCTGCCAACTGTTTCAGTGGAGAAAACGTTTTAACAGAA
CCAATCACTTTCATGTATTTTCGACAATTCGAATGGATCGCCGAAAAAAC
GTTTATCACCAAGATCGAAGATTACCATGCACTGATTGCACTCAAGTCAT
GAATAAAAACTACCCTGTCCAAGAATTTACTGGAGAAATTAAAGTCGACA
AAACACCTGCCAACTGTTTCAGTGGAGAAAACGTTTTAACAGAACCAATC
ACTTTCATGTATTTTCGACAATTCGAATGGATCGCCGAAAAAACGTTTAT
CACCAAGATCGAAGATTACCATGCACTGaTCAAACTACCACTCAGTACCC
CCGCTGGTCACCTCAAAGGACATTTTATCAAACTGGAGATAGAATGCGAG
GGGAAAATTGAACGTTTGTTTACCAAGCTAGAAGGCGTCAaTCAAACTAC
CACTCAGTACCCCCGCTGGTCACCTCAAAGGACATTTTATCAAACTGGAG
ATAGAATGCGAGGGGAAAATTGAACGTTTGTTTACCAAGCTAGAAGGCGT
CAtgaCCATCACAGATCCTCTAGCAGTCAACTCAAAGATCACACCGAAAC
CTCCGATCACCAACGGGACCTCAACAACAACCACTACAACTAAATCACCG
ACCACCCTTCAACCTAATATAAACAACACTGTAACCATAACCAACGGAAA
TGCAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATACTCTTCAAC
CTCCGAGAAATGAAACAATAAACACACAAATAATAACTACAGAATCGGTG
ATCAAAGAaaccccacatacaacacattcaacaacaatcaaaccaaacaa
ttcaccaagacttccaacaaccaaaaacacgacaacTGTTATTACTCCAA
AAAATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTACCTTCCGAA
GCAAACGCAACAGAATCACCGAAAACAACAAGAAGAAGAGCTAGAACAAC
CCCTCCCCGAccaaataaaccaacaactcccacaactccaaactggctta
taaaaacaaaaacaaacgcgacaaagtccactcttcgcaacacaaaaaca
aaagagtgaCCATCACAGATCCTCTAGCAGTCAACTCAAAGATCACACCG
AAACCTCCGATCACCAACGGGACCTCAACAACAACCACTACAACTAAATC
ACCGACCACCCTTCAACCTAATATAAACAACACTGTAACCATAACCAACG
GAAATGCAAAGACCAATGATTCAAAAACTCAATCACCAGTGTATACTCTT
CAACCTCCGAGAAATGAAACAATAAACACACAAATAATAACTACAGAATC
GGTGATCAAAGAaaccccacatacaacacattcaacaacaatcaaaccaa
acaattcaccaagacttccaacaaccaaaaacacgacaacTGTTATTACT
CCAAAAAATCCTTACGCTAAAGCAACTCCAATACCGAACATTCTACCTTC
CGAAGCAAACGCAACAGAATCACCGAAAACAACAAGAAGAAGAGCTAGAA
CAACCCCTCCCCGAccaaataaaccaacaactcccacaactccaaactgg
cttataaaaacaaaaacaaacgcgacaaagtccactcttcgcaacacaaa
aacaaaagag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:143460..151969 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 529-1080:7959 |
| Aaloc | 415-525:7484 |
| Aaloc | 223-414:5026 |
| Aaloc | 1-219:1 |
|
