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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000337_pilon:160363..162170+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015231 ID=XLOC_015231|Name=XLOC_015231|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1808bp|location=Sequence derived from alignment at sc0000337_pilon:160363..162170+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTCCAAGcaaaaaaccaaagaaaagtaAGTACTCACAAATTTG
ACTATGTTAACAATTATCTCGTTATAACTCTCCCAGCTACCTTCAGTATT
CCATGGctttttccaaatatttctcagcaaaaaatcaagaaattttttaa
gcataaacatttataagcatatccaggctcaaatcttgaaaaaaaccTAA
GCGTTGCAAAGCACATGCTAAGCCTtagtttgcaaaatttcaaagcattt
atcttccaaattacaaaaaacgtcgaaagttatatttcaggcaGGCTCAC
AATTATTTATCCTATGCTTATATAAATATCAGCAAAGctttcgtttttgt
acttgctttcaacttgccttttttcgtaattttaatgtgatttttttatt
atttcgtgatattttGAAGGATgttaaaaattctttgttatcATTAGCTa
tgtatttacaaatttttaaaaatgcgtgcagtatttttatcaaattttga
caaCAATTTAGCCCTCAAACCTTTGTGGATTAAAATTCATTGAGTGAGTT
TTAAGCCTGCCCGAAGGGCCTGAGTAGAATCTCTAAGAAAAATCGAAGCC
ACTTATTCTACttctacttatttcccatcgaGAACGCAGCATTATTAATA
ATGACGACAaatactaatttttttaaatgtagcGATAAATtccatttgat
atttttcaaagatttttccaatGATTTATCCCTTGAATCTGAACTCTTTG
AAACCTATGAAAATGACAGCCATTTTTTCAATTACACTATCATTTCTTTT
ATAGCCCTCATTGATGTTGAAGGTTACATTACATTTGTATCTTCCCCCAG
GAAGACTAAAAGATGGGAAAAAGATTTCATAGAAATAAGTATCAACTCTG
CAACCAAAACTTTGCGAGGTTTATGCTACGACAAAGACAGGTCGCCTCAA
TTTACAAAattcaaagaagaaaataaatcatGCCTCATTGTCAAGGCTGA
ACTGTCTAATAAAGACGACATTATCATTGGACATGATACAACAATCAAGT
CTAAAGAAGTtgactttgaaaataaaacccaTGAGCCACCAACGGTAACC
ATGGAACAAGTTATAAACGAATGCTCCCTATACCAGAGAGTTACAATTGT
GGGCAAACTCATCAATTTAAAACCAGCAGCTTTTAGTGTCTTCAAACGAC
AACATCTTCGGGAAGGTGTCTTCATTGATACATCAACGTTCACAAGACCA
ATCACTTTCTTCAACGATGACCTCATTGAAATTGTGAAAGAGAACATTGT
TTACAAAATTACAAATGTCGTTATATCTACTTATGGTgggaaaaaaaatc
tgcaagTTTCTGAGAATTCTGTAATTACCGAAATGGAAGATCCAGGAATC
GACGTTCCTGTGGCTGATACCAATTCTGTATCTGGAATTATATCAATGAT
TGAAACAAACACTTTagacaagcaatttcactgcaAAATATGCGACAATA
TCATCACACCCAATGCTCATCAAAACTTTGAATGTTGTGGGAAGACATTT
ACTGATTTAGATGTCAACATTGTAGAAAATGTCACATTTATGCTGCGCTC
AAATACCACAAATAACACTATGAAATTTGCTTGTCCACGAAAATTCCTTG
ATGCTCTTGTGGGTGATTGTGTTGATGATGAAATGttcatcaattttctt
ttgaagaaaGCTGTAAATATTGAGTATACATCAAATGCTGATAGTTGCAA
TGTTGTAGTAAAGATCGAGTCTGGTCAAACCAAACCTGCTAAAGAAAAGT
TGTGGTGA Coding sequence (CDS) from alignment at sc0000337_pilon:160363..162170+ >XLOC_015231 ID=XLOC_015231|Name=XLOC_015231|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2070bp|location=Sequence derived from alignment at sc0000337_pilon:160363..162170+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTCCAAGcaaaaaaccaaagaaaaATGGCAAGTCCAAGcaaaa
aaccaaagaaaaCCCTCATTGATGTTGAAGGTTACATTACATTTGTATCT
TCCCCCAGGAAGACTAAAAGATGGGAAAAAGATTTCATAGAAATAAGTAT
CAACTCTGCAACCAAAACTTTGCGAGGTTTATGCTACGACAAAGACAGGT
CGCCTCAATTTACAAAattcaaagaagaaaataaatcatGCCTCATTGTC
AAGGCTGAACTGTCTAATAAAGACGACATTATCATTGGACATGATACAAC
AATCAAGTCTAAAGAAGTtgactttgaaaataaaacccaTGAGCCACCAA
CGGTAACCATGGAACAAGTTATAAACGAATGCTCCCTATACCAGAGAGTT
ACAATTGTGGGCAAACTCATCAATTTAAAACCAGCAGCTTTTAGTGTCTT
CAAACGACAACATCTTCGGGAAGGTGTCTTCATTGATACATCAACGTTCA
CAAGACCAATCACTTTCTTCAACGATGACCTCATTGAAATTGTGAAAGAG
AACATTGTTTACAAAATTACAAATGTCGTTATATCTACTTATGGTgggaa
aaaaaatctgcaagTTTCTGAGAATTCTGTAATTACCGAAATGGAAGATC
CAGGAATCGACGTTCCTGTGGCTGATACCAATTCTGTATCTGGAATTATA
TCAATGATTGAAACAAACACTTTagacaagcaatttcactgcaAAATATG
CGACAATATCATCACACCCAATGCTCATCAAAACTTTGAATGTTGTGGGA
AGACATTTACTGATTTAGATGTCAACATTGTAGAAAATGTCACATTTATG
CTGCGCTCAAATACCACAAATAACACTATGAAATTTGCTTGTCCACGAAA
ATTCCTTGATGCTCTTGTGGGTGATTGTGTTGATGATGAAATGttcatca
attttcttttgaagaaaGCTGTAAATATTGAGTATACATCAAATGCTGAT
AGTTGCAATGTTGTAGTAAAGATCGAGTCTGGTCAAACCAAACCTGCTAA
AGAAAAGTTGTGGTGACCCTCATTGATGTTGAAGGTTACATTACATTTGT
ATCTTCCCCCAGGAAGACTAAAAGATGGGAAAAAGATTTCATAGAAATAA
GTATCAACTCTGCAACCAAAACTTTGCGAGGTTTATGCTACGACAAAGAC
AGGTCGCCTCAATTTACAAAattcaaagaagaaaataaatcatGCCTCAT
TGTCAAGGCTGAACTGTCTAATAAAGACGACATTATCATTGGACATGATA
CAACAATCAAGTCTAAAGAAGTtgactttgaaaataaaacccaTGAGCCA
CCAACGGTAACCATGGAACAAGTTATAAACGAATGCTCCCTATACCAGAG
AGTTACAATTGTGGGCAAACTCATCAATTTAAAACCAGCAGCTTTTAGTG
TCTTCAAACGACAACATCTTCGGGAAGGTGTCTTCATTGATACATCAACG
TTCACAAGACCAATCACTTTCTTCAACGATGACCTCATTGAAATTGTGAA
AGAGAACATTGTTTACAAAATTACAAATGTCGTTATATCTACTTATGGTg
ggaaaaaaaatctgcaagTTTCTGAGAATTCTGTAATTACCGAAATGGAA
GATCCAGGAATCGACGTTCCTGTGGCTGATACCAATTCTGTATCTGGAAT
TATATCAATGATTGAAACAAACACTTTagacaagcaatttcactgcaAAA
TATGCGACAATATCATCACACCCAATGCTCATCAAAACTTTGAATGTTGT
GGGAAGACATTTACTGATTTAGATGTCAACATTGTAGAAAATGTCACATT
TATGCTGCGCTCAAATACCACAAATAACACTATGAAATTTGCTTGTCCAC
GAAAATTCCTTGATGCTCTTGTGGGTGATTGTGTTGATGATGAAATGttc
atcaattttcttttgaagaaaGCTGTAAATATTGAGTATACATCAAATGC
TGATAGTTGCAATGTTGTAGTAAAGATCGAGTCTGGTCAAACCAAACCTG
CTAAAGAAAAGTTGTGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000337_pilon | genome | sc0000337_pilon:160363..162170 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 34-1035:807 |
| Aaloc | 1-30:1 |
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