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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000337_pilon:272108..274260- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015217 ID=XLOC_015217|Name=XLOC_015217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2153bp|location=Sequence derived from alignment at sc0000337_pilon:272108..274260- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCTTCCCTGGATTATTCGATCAACTCGAGCAGTATAAATAAAGA
AACTTCTAATTTAAAGAATCATTCAAAACTTCTGCAGTTAGGACTCAGTA
ACTCGAAATTAGAGCAACCTTTGTTGAATGACTTCCTTCGTCGTTTGCAC
AGATCGAAATTACGACGCCTTTTGTATTGTGAATATAAAAGTAGAGGATT
TATTGTTACTGAACAAATACGAGGAGCAGTTGATAGTATTATCTCACCAG
ATAAAGACAATTCATTGGACTCGAGATTAAAAAGTGTTCCTATGCATCAG
GTATTTTTATGTAAATGTGGCTGGTTGCTTTTTAACCCATCTACATTACC
ATGCGGACACACAATGTGCAAGCACTGTGCAGATGAGAATCTGTTTTGTA
TTTACTGTGGCCACACAATAGATGACGTTAGCTCTCCGAATTTATTTCTG
GTTCATCTTCTCAGCACATGGTTCCCTGGTGAATATCAAAGTTCCCAACA
CAAGCTTGATGCCAAGATATTACTGGCATCTGAAGATTACGAACTTGCTC
TTAACGAAATCGATATTTGCATTTCAATACTTGATGATGATTATTCAGCA
TTTCAATTACGATCAGAAATTTATTTAAAACTTGAAAATTATAAAGACGC
ATTAGTGGATGCAACTAAATCATGTGAACTAAACTCTGAATGTGGTAAAT
CTCAGTTCATCAGAGGTAGTTGTTTTTCACATTTAGGCAAGTTAAATGAA
GCAATTGACGCATTTCAGTTATGCTTAGAACTGGAACCAGAAGATATGGC
ATTATGTTCTCTGGTTATTAATAAACTTGATTCAATTCTGTCACTTCCGG
ATACTGGCTCTAAACTCTCAGATTCTGATTCTTCATCAGATGAAGGAGTG
GGTGGCAAGCGTTCAAAGTTAGATACATCAACTAATGAAAACACCGAACC
GTCATGTCGCCACGCTAGTTCTAGTAGTTCAAATACATCATCCACCACAC
CTTCAAATACACAGGCTAACAAATCTTACACTGATAAAATTGATGTCGAA
AGAAGGAAAAATGATTGTACTGAAGCTCATACACCAGATACAGACTACAA
AAATGATTCAGCTACTAAAACAGAAAATTATGTGTCAAATGTCGAAGAGA
AAATTCATGGTGTACCAAAAAAACTATTATCAGAAGAAGATTTCGAGTGT
AAATTATGTTACGAATTACTGTTCAAACCTATTACCACTACGTGCGGTCA
TGTGTTTTGCAAGAACTGTTTACTTAGAAGTCTAGATCATAATGTTACTT
GCCCTATATGTCGAGTCTCATTGGCTGGTTTTTTGAGTAACCCTTTGAAA
CCTGTCACTAAGCTTATTGAAGATATTTTGAGTTTGTTTTTCACCGATGA
ATTTGGTAAAAGAAGACAAGCGTACATGAGCCGTATGGAAAGGCTTGCAA
GGTAAGAACCTTAGTAGCCTTTATTTATTACTCCTATTACATCTTCTTTC
GTTAATTCACTTCTGTTTTCTTATAAATCGTTTCAGGTCAGAGAGAAATC
TATAAGAGATATATTTTTTACGTAAGATTTTGCGATGAACATATGTTTTT
TATGTCAAATACAGAATTTCGAAAGGCACTTGTCAGACTTTCTACTCATT
AAGTTGTTGTTTTTTCCTAATCGTTTCAATATTGTTGTTGTTCTCTTTTG
CAGGGTTGGCAAAGATGAGGAGGTTGAGATTCCGATATTTGTGTGTTCAA
TTGCTTTTCCTTCGGTCAAATGTCCGTTACATATTTTCGAACCTAAATGT
CGATTAATGATACGTGAATGCATCGAGTCCGGCTCCAGGAAGTTTGGGAT
GTGTGTCCCTCAGGGTGACGATGGTTTCTCTGAAATGGGTAAAAGCAAGA
TTTTCATTTTCTCAATACGTACCACTATATTTTACAATGGATTGATTCTT
AGTTTTTTTTCACAAGATTTTAGTTTCAACTACAGTATGTCAAACAAAAG
ATCGTCTCGTAAATATCTTAAAATTTATCACACCATCCCTTTAATAACTT
TTTTAATACCATTACTTATTGAACTTTCTCTTCTTTTATTCTAAAGGTAC
GATATGCGAAATTACCAAGATACAAAATCTGCCGGATGGACGGTATGTCA
TAA Coding sequence (CDS) from alignment at sc0000337_pilon:272108..274260- >XLOC_015217 ID=XLOC_015217|Name=XLOC_015217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3492bp|location=Sequence derived from alignment at sc0000337_pilon:272108..274260- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCTTCCCTGGATTATTCGATCAACTCGAGCAGTATAAATAAAGA
AACTTCTAATTTAAAGAATCATTCAAAACTTCTGCAGTTAGGACTCAGTA
ACTCGAAATTAGAGCAACCTTTGTTGAATGACTTCCTTCGTCGTTTGCAC
AGATCGAAATTACGACGCCTTTTGTATTGTGAATATAAAAGTAGAGGATT
TATTGTTACTGAACAAATACGAGGAGCAGTTGATAGTATTATCTCACCAG
ATAAAGACAATTCATTGGACTCGAGATTAAAAAGTGTTCCTATGCATCAG
GTATTTTTATGTAAATGTGGCTGGTTGCTTTTTAACCCATCTACATTACC
ATGCGGACACACAATGTGCAAGCACTGTGCAGATGAGAATCTGTTTTGTA
TTTACTGTGGCCACACAATAGATGACGTTAGCTCTCCGAATTTATTTCTG
GTTCATCTTCTCAGCACATGGTTCCCTGGTGAATATCAAAGTTCCCAACA
CAAGCTTGATGCCAAGATATTACTGGCATCTGAAGATTACGAACTTGCTC
TTAACGAAATCGATATTTGCATTTCAATACTTGATGATGATTATTCAGCA
TTTCAATTACGATCAGAAATTTATTTAAAACTTGAAAATTATAAAGACGC
ATTAGTGGATGCAACTAAATCATGTGAACTAAACTCTGAATGTGGTAAAT
CTCAGTTCATCAGAGGTAGTTGTTTTTCACATTTAGGCAAGTTAAATGAA
GCAATTGACGCATTTCAGTTATGCTTAGAACTGGAACCAGAAGATATGGC
ATTATGTTCTCTGGTTATTAATAAACTTGATTCAATTCTGTCACTTCCGG
ATACTGGCTCTAAACTCTCAGATTCTGATTCTTCATCAGATGAAGGAGTG
GGTGGCAAGCGTTCAAAGTTAGATACATCAACTAATGAAAACACCGAACC
GTCATGTCGCCACGCTAGTTCTAGTAGTTCAAATACATCATCCACCACAC
CTTCAAATACACAGGCTAACAAATCTTACACTGATAAAATTGATGTCGAA
AGAAGGAAAAATGATTGTACTGAAGCTCATACACCAGATACAGACTACAA
AAATGATTCAGCTACTAAAACAGAAAATTATGTGTCAAATGTCGAAGAGA
AAATTCATGGTGTACCAAAAAAACTATTATCAGAAGAAGATTTCGAGTGT
AAATTATGTTACGAATTACTGTTCAAACCTATTACCACTACGTGCGGTCA
TGTGTTTTGCAAGAACTGTTTACTTAGAAGTCTAGATCATAATGTTACTT
GCCCTATATGTCGAGTCTCATTGGCTGGTTTTTTGAGTAACCCTTTGAAA
CCTGTCACTAAGCTTATTGAAGATATTTTGAGTTTGTTTTTCACCGATGA
ATTTGGTAAAAGAAGACAAGCGTACATGAGCCGTATGGAAAGGCTTGCAA
GATGACTTCTTCCCTGGATTATTCGATCAACTCGAGCAGTATAAATAAAG
AAACTTCTAATTTAAAGAATCATTCAAAACTTCTGCAGTTAGGACTCAGT
AACTCGAAATTAGAGCAACCTTTGTTGAATGACTTCCTTCGTCGTTTGCA
CAGATCGAAATTACGACGCCTTTTGTATTGTGAATATAAAAGTAGAGGAT
TTATTGTTACTGAACAAATACGAGGAGCAGTTGATAGTATTATCTCACCA
GATAAAGACAATTCATTGGACTCGAGATTAAAAAGTGTTCCTATGCATCA
GGTATTTTTATGTAAATGTGGCTGGTTGCTTTTTAACCCATCTACATTAC
CATGCGGACACACAATGTGCAAGCACTGTGCAGATGAGAATCTGTTTTGT
ATTTACTGTGGCCACACAATAGATGACGTTAGCTCTCCGAATTTATTTCT
GGTTCATCTTCTCAGCACATGGTTCCCTGGTGAATATCAAAGTTCCCAAC
ACAAGCTTGATGCCAAGATATTACTGGCATCTGAAGATTACGAACTTGCT
CTTAACGAAATCGATATTTGCATTTCAATACTTGATGATGATTATTCAGC
ATTTCAATTACGATCAGAAATTTATTTAAAACTTGAAAATTATAAAGACG
CATTAGTGGATGCAACTAAATCATGTGAACTAAACTCTGAATGTGGTAAA
TCTCAGTTCATCAGAGGTAGTTGTTTTTCACATTTAGGCAAGTTAAATGA
AGCAATTGACGCATTTCAGTTATGCTTAGAACTGGAACCAGAAGATATGG
CATTATGTTCTCTGGTTATTAATAAACTTGATTCAATTCTGTCACTTCCG
GATACTGGCTCTAAACTCTCAGATTCTGATTCTTCATCAGATGAAGGAGT
GGGTGGCAAGCGTTCAAAGTTAGATACATCAACTAATGAAAACACCGAAC
CGTCATGTCGCCACGCTAGTTCTAGTAGTTCAAATACATCATCCACCACA
CCTTCAAATACACAGGCTAACAAATCTTACACTGATAAAATTGATGTCGA
AAGAAGGAAAAATGATTGTACTGAAGCTCATACACCAGATACAGACTACA
AAAATGATTCAGCTACTAAAACAGAAAATTATGTGTCAAATGTCGAAGAG
AAAATTCATGGTGTACCAAAAAAACTATTATCAGAAGAAGATTTCGAGTG
TAAATTATGTTACGAATTACTGTTCAAACCTATTACCACTACGTGCGGTC
ATGTGTTTTGCAAGAACTGTTTACTTAGAAGTCTAGATCATAATGTTACT
TGCCCTATATGTCGAGTCTCATTGGCTGGTTTTTTGAGTAACCCTTTGAA
ACCTGTCACTAAGCTTATTGAAGATATTTTGAGTTTGTTTTTCACCGATG
AATTTGGTAAAAGAAGACAAGCGTACATGAGCCGTATGGAAAGGCTTGCA
AGGGTTGGCAAAGATGAGGAGGTTGAGATTCCGATATTTGTGTGTTCAAT
TGCTTTTCCTTCGGTCAAATGTCCGTTACATATTTTCGAACCTAAATGTC
GATTAATGATACGTGAATGCATCGAGTCCGGCTCCAGGAAGTTTGGGATG
TGTGTCCCTCAGGGTGACGATGGTTTCTCTGAAATGGGTAAAAGCAAGAT
TTTCATTTTCTCAATACGTACCACTATATTTTACAATGGGTTGGCAAAGA
TGAGGAGGTTGAGATTCCGATATTTGTGTGTTCAATTGCTTTTCCTTCGG
TCAAATGTCCGTTACATATTTTCGAACCTAAATGTCGATTAATGATACGT
GAATGCATCGAGTCCGGCTCCAGGAAGTTTGGGATGTGTGTCCCTCAGGG
TGACGATGGTTTCTCTGAAATGGGTAAAAGCAAGATTTTCATTTTCTCAA
TACGTACCACTATATTTTACAATGAGGTACGATATGCGAAATTACCAAGA
TACAAAATCTGCCGGATGGACGGTATGTCATAAAGGTACGATATGCGAAA
TTACCAAGATACAAAATCTGCCGGATGGACGGTATGTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000337_pilon | genome | sc0000337_pilon:272108..274260 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1690-1746:58 |
| Aaloc | 1453-1686:450 |
| Aaloc | 1-1449:2154 |
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