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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000412_pilon:180413..183717+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015047 ID=XLOC_015047|Name=XLOC_015047|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3305bp|location=Sequence derived from alignment at sc0000412_pilon:180413..183717+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGCAGCAGATGATGATGATTCACAATTGCAAGCTTTGAAAGGTTA
gaattgtaaattttcaaaaattgatgtaagTATGTTTGACTTGATTGACC
ATCTGTTATTCTTTATCACTGACTATTCTTTAGCATTCCTTTCTAATATT
ATTTTCCAATTGTTGATGTTTTTGAGGacttgatgatattttttactCCC
CAGCCTCTGTTTTACAAGAAGctagattaatttttttttgaatcttttca
gGATTTGCTGAtgcagaagaaaaagaaatagtcGAGAAATTGGAAGATAT
ATTAAGTGATGTTGCAAAAACTGGACAGTACATGTAAAAACTCTCCCTTA
TTTAAACTCTCTTAACTCTTGTAATCGTCTCAATGTCAAATGCATAATTC
AATATGGTAATCTTGACGACAGAACCCTCACTTTAATATTAAATTGTTAT
TAAGACATTtgctttttccttaaaatgatTTGCAAAAAGTGTATTGTTTA
TGATTTGCATATTGAAATGTGGACTCTAGCCTTAATGGAAACTTCAAACC
TAAACAACAACATTTTCAATAGAAGAGCAGTTATAGGTCATTTATAAGAC
ATGGGAGATATCCTGGCCTAAACCAGGctgtaaacctttttcaaattttg
tttctgatTAGTATGGTCTGCCTCAATGTTTGTAGACTAAGATTTGCAGG
GTACAAGTTGTAAACCatatccaaataaaaatgaaaattagcaTTCTTTA
GTATTAACACATGgttttaaaaatgttgttttttttagatttccttGGCA
TTTCATGAAGCCGCTCTATTATCATAAATTGGATAAGGTAAatatattag
ttttttttatatccAAAATTTCGAAACATTTAGAAAACAACGGTTTTGAA
CATGAAACTGTAAATTAACAATAAATATACTTCAGCAGGAGTAAACTCTT
TCTGTATGAATACTTCTCTTTGGTTGACTGTAACATAGGATAAACATATA
GAAAATGCAGTTAATAGTAATCAAAATAATGTCATCCATAAATCAACAAA
ATATACAGatctatttttcaaataattccAGGTAACAACCGAATTTTTGA
CTACACATCCTCCAAAAAATCAAGATGGTTCTGAAAATCAACAAGCAATG
TCTGAATTGAAAGATATCAGAGAAGAATTACTGGagacttttgataaatt
tgcACTGTAAGTTTTATTGAAGACTTTTATATTTCTACTAACTTTCCCTC
TATCTCGGCTTAAACCTTGGAAAGAACTAGATATGGTTGAGAGCCATATG
TTAGGTTTAGTAACTTAAAATCTTGGCTACTATCGAACTCTCAAGTCTTA
TGCTATAAAATCAGGACGAGTGAAGACAAAATAATACAAGGAAAATAATG
TAAAACAACATTATCAGCCAACATATATTTTGTGATTTGTTCTTCAattg
ttaaaattcaaaattaaataaactCTAAGTTCAAATAACTATCTTACTTT
TTTAACTATTtgataaatcaaatttttttcaatcactCTTTTAGGGCACC
ATTTACACTTCAAAGAGTGACAGAACTACTTTTACAACCAAGAAAGCACT
ACAAGACAACTTCCAAATTTTTCAGGGGGCTCGGGAAGGTATTTTTAATA
TTCATTGAGAACATAACCATTTTCTACACAAAATACAATTAAGTTCAACC
CTATCCTTGTTATAAAGGCACATTTAGAAATACTATACTAGACAACTCTT
AGGTATTGAAATTAATTTCCAATCAAATTGAAAAAGTCTCTCctggaaaa
acctttttcaaattgtaGCTGGCATTGAGATTTGCATTCGGAAATGAAAA
GTTGGGCTCCTAGCAATCTTCAGTTCTTCTAAAGGTTCTTCATTTAACAA
GTTAAAAGTTTCATTATTTTCTATCTTGCTCTTCAGAATATCATGGTTGT
TAGCACATTGGAAATGGCGGAGACTGAAGAAAGAAACAAGTTGAAgtata
atttaaatttattcttgaactgaaatgaaatatttaagtttagGCCACAT
AGCTAAGTatactaaaattaaaaatagttttctttcaataaaagtacATA
ACTTAAAGTTTTGTGCTTCTGCACTCGTTCAAATGTACATACGAAGAAAA
GGAGCTAAATATACTATAATAATTTGAATTTGCCTGCCTCTTGATTTCTA
TTTATATTGAATCAAGATGATCCTAATAGTGTAGTCCTAATCCCTCTTGG
TCAACCCTGAGCACTCTCGATTGTTTTTGTCCATTCATTTTATTGATcta
tataaaaattaaaacaaaatgccaatggtaaaatcaaaacaaacattatt
TGAGGATGACACGACCATCAGTCATACTGGACTTGTCCAAGTGTTAAGAA
GGGTGCTTCAAATTGCCAAATAAACCTTTGCAAAAGTCTTTACTTGATGT
TTCCATCATTTGAAATCTGCCCCTACTTATATTATATGATGATtaaactt
tcaattttattaaCTTATCCAAAAATAAAGGTTTGATTGAGTTAAGAAAT
CTCTGATTAATTCTTTCTGGCAGAAGGCAGTATGAAGATGCCAATGGAAA
ATCAGAATATGAAATGCCTCCAATGAAGAGAATGGAAAACGGCAGTGTGT
TTTATTCATACGGTGGACCAAACAGTCTAAATTATAACGACCTCAATCAT
GGGTATATGGATGAAGAGCATGAAGAAACATTTGCAGATGTCTGTGATGG
AGAAGATTGTGTTGAGGAACAGGTTAATGGATATGTGACTACGGCTGCAA
ACGCAACTGTTGCGGCTGAGGAACAACAGCAAAATACAGAGGTCACAATA
GAGAGTAATGCAGTATTGGAAGAGGCGCAAGCTGTAACAGCGGTAACAAC
GACACCAGCAGAAGAAGTAGACGAAGCTGAAGGTATTTTTTCGATCGCTT
TTCTCTGTGTTTTTTGGTCTAATAATGCAAGCCCATGCTAATAAAGTAAT
TCATATCAGGTCAGAAATTACATAGCTTTGTCATTTTATTTCGAGTTTGT
GCATCCAGAATCCCTCTAGTTTTGTGAAAATTACGTGTTAAAcgtatttc
aaaattatttttcgtaaATGCATAAAGTCTTGAAAAGAAATTGCGTAAAT
CTGTTTTCACTGGTGGTCTTTTAAAGATAGtagttttgatatataaaaCA
AACATAAAACAGATCCATTGTTAATTTACAGTATATACCATTCTTAATTA
CTTTTCATTACTTTTAGCTGACCTGACGAGCAATGAATCCATGGAAGGGA
Gttaa Coding sequence (CDS) from alignment at sc0000412_pilon:180413..183717+ >XLOC_015047 ID=XLOC_015047|Name=XLOC_015047|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000412_pilon:180413..183717+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGCAGCAGATGATGATGATTCACAATTGCAAGCTTTGAAAGATGA
CAGCAGCAGATGATGATGATTCACAATTGCAAGCTTTGAAAGGATTTGCT
GAtgcagaagaaaaagaaatagtcGAGAAATTGGAAGATATATTAAGTGA
TGTTGCAAAAACTGGACAGTACATGATTTGCTGAtgcagaagaaaaagaa
atagtcGAGAAATTGGAAGATATATTAAGTGATGTTGCAAAAACTGGACA
GTACATatttccttGGCATTTCATGAAGCCGCTCTATTATCATAAATTGG
ATAAGatttccttGGCATTTCATGAAGCCGCTCTATTATCATAAATTGGA
TAAGGTAACAACCGAATTTTTGACTACACATCCTCCAAAAAATCAAGATG
GTTCTGAAAATCAACAAGCAATGTCTGAATTGAAAGATATCAGAGAAGAA
TTACTGGagacttttgataaatttgcACTGTAACAACCGAATTTTTGACT
ACACATCCTCCAAAAAATCAAGATGGTTCTGAAAATCAACAAGCAATGTC
TGAATTGAAAGATATCAGAGAAGAATTACTGGagacttttgataaatttg
cACTGGCACCATTTACACTTCAAAGAGTGACAGAACTACTTTTACAACCA
AGAAAGCACTACAAGACAACTTCCAAATTTTTCAGGGGGCTCGGGAAGGG
CACCATTTACACTTCAAAGAGTGACAGAACTACTTTTACAACCAAGAAAG
CACTACAAGACAACTTCCAAATTTTTCAGGGGGCTCGGGAAGAATATCAT
GGTTGTTAGCACATTGGAAATGGCGGAGACTGAAGAAAGAAACAAGTTGA
AAATATCATGGTTGTTAGCACATTGGAAATGGCGGAGACTGAAGAAAGAA
ACAAGTTGAAAAGGCAGTATGAAGATGCCAATGGAAAATCAGAATATGAA
ATGCCTCCAATGAAGAGAATGGAAAACGGCAGTGTGTTTTATTCATACGG
TGGACCAAACAGTCTAAATTATAACGACCTCAATCATGGGTATATGGATG
AAGAGCATGAAGAAACATTTGCAGATGTCTGTGATGGAGAAGATTGTGTT
GAGGAACAGGTTAATGGATATGTGACTACGGCTGCAAACGCAACTGTTGC
GGCTGAGGAACAACAGCAAAATACAGAGGTCACAATAGAGAGTAATGCAG
TATTGGAAGAGGCGCAAGCTGTAACAGCGGTAACAACGACACCAGCAGAA
GAAGTAGACGAAGCTGAAGAAGGCAGTATGAAGATGCCAATGGAAAATCA
GAATATGAAATGCCTCCAATGAAGAGAATGGAAAACGGCAGTGTGTTTTA
TTCATACGGTGGACCAAACAGTCTAAATTATAACGACCTCAATCATGGGT
ATATGGATGAAGAGCATGAAGAAACATTTGCAGATGTCTGTGATGGAGAA
GATTGTGTTGAGGAACAGGTTAATGGATATGTGACTACGGCTGCAAACGC
AACTGTTGCGGCTGAGGAACAACAGCAAAATACAGAGGTCACAATAGAGA
GTAATGCAGTATTGGAAGAGGCGCAAGCTGTAACAGCGGTAACAACGACA
CCAGCAGAAGAAGTAGACGAAGCTGAAGCTGACCTGACGAGCAATGAATC
CATGGAAGGGAGttaaCTGACCTGACGAGCAATGAATCCATGGAAGGGAG
ttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000412_pilon | genome | sc0000412_pilon:180413..183717 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 817-852:3270 |
| Aaloc | 457-813:2575 |
| Aaloc | 397-453:1937 |
| Aaloc | 304-396:1546 |
| Aaloc | 178-300:1082 |
| Aaloc | 130-177:790 |
| Aaloc | 49-126:254 |
| Aaloc | 1-45:1 |
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