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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:470566..474138+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014958 ID=XLOC_014958|Name=XLOC_014958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3573bp|location=Sequence derived from alignment at sc0000001_pilon:470566..474138+ (Clytia hemisphaerica_ch_hm2_pilon)
gtgaaagtaaaattcgaaaatcaaaacaacaacaaccaccaaAGCGTAAA
GGTTTTGGTAAAAACTTCATCAACTTCAAAGTTTCTGGATGTATTTCTGG
GGAGAGAAAGCCTTGAAGAAATGAATCCAGATGATCCTTGGGGAAATAAC
GTGAATGCTGGAAGAGGCGTTTGTGGATTTGATGATAACTTTGGTAAAGA
TGAGGAatcaaaggaaagaaaaaaaCCTGTACAAACTGTAATCAATGATA
ACTATTCTTCAACGCTTGGTGAGATATTATGATGGTTTTTTTCATCTCAT
CACCGCCATATGTTTTAATTGGGGTTTAATTGCAACCATATTCAGAATCA
ATAATCAACGTTTCCTGTCAAAATTTAGTGCTGATTGCAGTAATAGAATT
GAAGTTGTTTTTAATATGACGTCGTTTATCGTCTTTTGGACTTTGACGGT
TTGACGTGTTGTTACACGCGACGTATTTCATAAACGCAGGGCTCCCACAG
CTCCTCAAATCTCCTCAATTCTCCTCAAATCTCctactttttctcgaatt
tctccaatattttcttcaaatctcctcaattaaatttgaccaaaaataaa
aaaacattcaaagtaGTATCGCTGGCCTTTAAAAGATGtttcgaaaattg
attttcaagaaTAACATGCAAAATCttctgctcgcttcgctcgcacatcT
CTTTACTCTAATATCATGTTTCCATTTCCtcattgtttttcaataacTCA
AAATCAGTGGCGTTCTAGCAGGGACAGGGGCCACGGCCACGACGATATCA
ACTCTTATCCACTACATATTCTCCTCTTCATAAAATACCTACtctagtaa
aagtttagaaactctggggggggCTGCGACTTCGGAAAATTAAGGGCGTT
ATTTCGAAAATAGATTATTGCCGCTATTGGTTCATGCTGTATATAAAATA
TGTCTAAGGACAATTACCTAGcccccaccccccAAGAAGGAGACTTTGGT
AAACCTTTCCGTTGTTTAGTTTGTAAAAAGCTCATTTTTACAACAAAAAA
CTCCCTCTTTCTCTCACAGTGTTGcttttttaacaacaaaaagcCTCATT
TTAACTTGACAAGTTTACTGTCAAGAAAAACTCCTCAAATTTTTACAGAA
ATCTCctcgaaaaagtgaaaaatcctCCTTAGTTCTCCTCAATTCtcctt
aaatttgaaattttgaaagctttggGAACCCtgtaacgtcaaaatcagtt
atTTTTAAACTGGCttaatttaactttttgatCAAGCACTTACTGAAATC
ATCTTGCTAATACGCTTCGTTTGGCTATAAACGAAAGATATAGTGCAATA
GCCCGAGGGATAATAGCAATATGTATttccctagaatttcagccaaaatg
tttaaattttagtcccaatttcaagaatttatgaccctttgagggagtcg
atttctgattttcgcaattttggaaccctttcagagactaaatttgcttt
taaatggttttttacCTCTCAAATTGGAGGAACTTTCGGATAGAAAATAG
AGGAtatgaaaaagggacccttatgactcgcacatacccggcacccttTT
TGCAtaagtacccccctccccccggagCAATAGGAAGCGGTGtccgtcac
gcaaaatatggtTCGGGAGTTACCTTAACTCGCTTAAGAAGATGAGTTTT
GATACTAAACTGATTAGACCTTAACatcacgtcatcacgcaaaatttttg
ccCTTATCACGATCATAAAATAATCCTCAAATTCGACCacgcaaaaatta
atgaaaatcgCCAGCAGGCACACGacattgttttaacgttcatttgAAGT
CCCTTGGGAGTCCAAAAGTTACAAGGGTCGTGTTCACACTGCAAACCTTA
CTTAATTAAATCCATTACCaacaaacaaagagatttatgatggatgaata
cactggtttattacagttctttgtaggttcacgagatctattataacacg
gtaattgatcttgcttaaggcttctcattggtcgattttttattgagagt
ttcgatttcacctgtgattggttgatattggtatccatacatcacttgaa
atccgcaaacatattttttctaatggttttactcattaactgcattcatc
ttagacatcaacaacaccgtttgcactatttctaattttttcctcagttc
attcgtttttgaaatcgtaaaactttttgttcactacacacattctttgt
ttatgcttccttaataaaatcttttattttaagggaagcctctaccctac
ccttaagacaatagagcctacgactcttaattaaggaagatcgattaaaa
attacaatactacgcgttcgactctttgttaaatgcacgttctgtattgt
agtcaacaaaagattctcctaactacatttttattaaggaagtAGTAGTG
TGAACACGATCAAGGACTCCTAGCAAGcctgttgatattttttaagcACT
TGCGGCTCATTTGGGGGAATTTTTTAAGTATGAAAAAGACTGTTTTTGGC
ACTATTgggaaatttttgagaaaagtgTAGTTGTACAGAGGTTTTATCCA
CGATAGTAACGTTCGtagtgaaaattagttcctatTACCACATTACCTGG
CCGTTTGCTTTTGTAGTAGCCGTCTGTTATTCAGGTCTCATAATAGTACA
CCATCACTTaacgttattttataaaaactgaATACCAAAAGTTCAATGAG
GATAACTCGATAATCTAACTCGATAAAGACTAGGAAAATTGTTAATTTTG
TTCTTTATTCAATTCTTTTATTAAAGTCTGATGGGCTTTTCCACAAAAAA
GATAATTGAATattggggtggaggatataatatTATTTTCGGAAATTTAC
CTTCAGGACAGCAGGTCAAAAACGCCTCCCCcgcccggacaagcatcagt
tagccccctggacattcaaaattgcccttaaacagagcaaaattacccct
aaacagagcaagtttaccccaaGGAAaactttgtagatttttcattaCCC
CCAGGACACTATATCCTACACCCCCTCCTATGTACATACATTTTCTGGAA
AGAGCCCAATTTCACATAAAAAGTCCGTTTTAACGTCTTttatttgaccc
ccccccccgccttgACTTAGACAGGGACGTCTTTTAGGTTACACTTATGT
CTTACTATTTATTTCAGAATATAAGCTACAGCGAgtgcaaaagaagaaaa
acaacggCAGCTCTCGAAATCCTGCCAAAGATATGTTAACTTCCATGCAA
ACGCAACGTGAATCTTTCATGGCCAACTTGATTGATAAAAATGATTCTAC
TTATAATACTGTGATGAGCACTGGTGAAAATCCTTCGTTTATTGACAATT
TATATCAAACCAATTCCATATATCGACATTTGAATCCGCAACAAGCTTTA
GAATCTTCAGAAAAAATCCCAATAGTTTATCACGATGAACTTAACAATGT
AAATGGTCAAGAGAAAACACAAATTAACGGAGAAATGAAGAAACAGATCA
CTGAATATAAAGAAGAAACGTAG Coding sequence (CDS) from alignment at sc0000001_pilon:470566..474138+ >XLOC_014958 ID=XLOC_014958|Name=XLOC_014958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000001_pilon:470566..474138+ (Clytia hemisphaerica_ch_hm2_pilon)
gtgaaagtaaaattcgaaaatcaaaacaacaacaaccaccaaAGCGTAAA
GGTTTTGGTAAAAACTTCATCAACTTCAAAGTTTCTGGATGTATTTCTGG
GGAGAGAAAGCCTTGAAGAAATGAATCCAGATGATCCTTGGGGAAATAAC
GTGAATGCTGGAAGAGGCGTTTGTGGATTTGATGATAACTTTGGTAAAGA
TGAGGAatcaaaggaaagaaaaaaaCCTGTACAAACTGTAATCAATGATA
ACTATTCTTCAACGCTTGgtgaaagtaaaattcgaaaatcaaaacaacaa
caaccaccaaAGCGTAAAGGTTTTGGTAAAAACTTCATCAACTTCAAAGT
TTCTGGATGTATTTCTGGGGAGAGAAAGCCTTGAAGAAATGAATCCAGAT
GATCCTTGGGGAAATAACGTGAATGCTGGAAGAGGCGTTTGTGGATTTGA
TGATAACTTTGGTAAAGATGAGGAatcaaaggaaagaaaaaaaCCTGTAC
AAACTGTAATCAATGATAACTATTCTTCAACGCTTGATAAGCTACAGCGA
gtgcaaaagaagaaaaacaacggCAGCTCTCGAAATCCTGCCAAAGATAT
GTTAACTTCCATGCAAACGCAACGTGAATCTTTCATGGCCAACTTGATTG
ATAAAAATGATTCTACTTATAATACTGTGATGAGCACTGGTGAAAATCCT
TCGTTTATTGACAATTTATATCAAACCAATTCCATATATCGACATTTGAA
TCCGCAACAAGCTTTAGAATCTTCAGAAAAAATCCCAATAGTTTATCACG
ATGAACTTAACAATGTAAATGGTCAAGAGAAAACACAAATTAACGGAGAA
ATGAAGAAACAGATCACTGAATATAAAGAAGAAACGTAGATAAGCTACAG
CGAgtgcaaaagaagaaaaacaacggCAGCTCTCGAAATCCTGCCAAAGA
TATGTTAACTTCCATGCAAACGCAACGTGAATCTTTCATGGCCAACTTGA
TTGATAAAAATGATTCTACTTATAATACTGTGATGAGCACTGGTGAAAAT
CCTTCGTTTATTGACAATTTATATCAAACCAATTCCATATATCGACATTT
GAATCCGCAACAAGCTTTAGAATCTTCAGAAAAAATCCCAATAGTTTATC
ACGATGAACTTAACAATGTAAATGGTCAAGAGAAAACACAAATTAACGGA
GAAATGAAGAAACAGATCACTGAATATAAAGAAGAAACGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:470566..474138 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 271-621:3223 |
| Aaloc | 1-267:1 |
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