XLOC_014934 (mRNA) -

Overview


Name	XLOC_014934
Unique Name	XLOC_014934
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000059_pilon:1418072..1423856-
coding sequence from alignment at sc0000059_pilon:1418072..1423856-

mRNA from alignment at sc0000059_pilon:1418072..1423856-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_014934 ID=XLOC_014934|Name=XLOC_014934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5785bp|location=Sequence derived from alignment at sc0000059_pilon:1418072..1423856- (Clytia hemisphaerica_ch_hm2_pilon)
AAATCTGCAAGCAGGGAATCATCATCGGACAGACCACCTGTCCCCCTACC
ATATAGCGGGTGGAAGGGGGCAGCAGACCTACAGTTGGGGGCTACAGCAA
GTCAGGAGGGTAAAGCGGACGTCTTTGTACAAAGCTCAGACCTTCTTGAT
GAGAATGGTAACCCTTTGTATGAACCCGTTATCAGTACAAAGAAAACAAT
TTCAAGGGGAGCATCCGTGTTATCTGACAGTGGAATTTCTTCTGAACCCT
CACCTGATGCATTTAAAGAGGAACCTATCTACGCATTACCAGAAGTCAGC
CCACAACGTCAAAGAAAGTAAGGAGCTCTTTTTTTCAAAAACATTTTCCT
TTTCAATATCTACAGTGGTCAAACAAAGGTTTTACGTCTGAGACGAAAAA
CGGATTTTACATAGCAATTGTAGGACATAATCTTAAAATTTCGGCGAATT
ATACGGATTTTTGAGACAGAAAATCCTCTTTATTTACTTCACAAAGACGG
ATATCAATCTGAGATGGAAGAAGTTTTGGACACTGCATCTAGTATTCTCG
GGATTGTATAACCCTAGAAAGTACTGCCACATATCAAACCTTACCTGCTT
GGAACGGAAATAGACCAACTCAACAGGGGGTATACGGTTTTTTAACAATC
TTTTCATCTTGACAGATTCAAGCCATCCAAACCAGCCCCGTACCAGCATA
GTAACAACCACACAACCTCGTCAAACGGATTCTCAATGTCGGTTACTGAA
GACCCATATTCATCCATAAATGACGGCTTGAAACCTAATGGCGGTGATCC
AGATGATTTGCTGTCTTCTATCAACGATAGTCTTAAACCGAAAAATATCT
CCGTGTATAAATCCAATCTGACTTTGGATGAAGCAGACAATGATGAAGGT
GCTATGGAAGACACTTATGCTTCTATTGATCAGGTAAACCTCATTTAAGA
CCTGTTCAGACGTTGGTTTCGTGTTGCTCCTTTACGGGTCGAGAGTGTTC
ATATTGGTTTTGGAACGTTTCTGAGCAAGAAAATGGAGTAGCTCCGTTCC
GATGAAAAAAAGTGGAGCGAAACCGTTTCGATCCGTTTTGCATTGTAACG
TCTTCTCTTTTGAATGTTTCGAAGTTTACAGTGTTTCGCAACCGTATCGT
TTCGAAACGATAACGGTAACGTCTGAACATTGTCTAACTTTCGCTGGTGC
CCAATCTCAATATTAAGGAACCTCTCTCTCACAGCTCCTATGAAACTGTT
TCTAACAGTGGGGATAAAAATTCGATTGTTCACAACTATAAAGATTCATT
TGGGATGGTGTTGGAGTTCAATTTTTCCATTGAATTTCATATGGAGATTA
AGTCAAATTCAATTTCCCAATGGAGGTGAAATTGTAGGGTGTTTTCCATG
AAATTTTAGCCTAATTTTCCAGTGGGGCGGGGTCCCACAAATCTGTGAAT
GGTTTATTATAACAAGAAAGAAGGTAGGCATCAAGAGATATGCAATGCTA
ATATTTTGTTAACCTGGAGGTCACACAGGGGCTGTTATAATTAATAGACT
TTATCATAACTAGCCTCAAAATTCTACAATATAGAGAAATAATGTCCAAT
TTGAAAATAGATTACCTAAAAGAAAGGAATTTTGGGACAAGCTTAAAACA
GAAGAGGAAAACGAAGACTTTGAATAACAAGTTTACAGGTTTCATTTACT
ATAAGTTTACATTTTCTTCTTTTAGAACGATTCAAAAATAGAATCTACCA
TCAACATCAAGCCTAAAAAAACAGTGGAGGATCCTTATTCTCTGGTTAAA
GATGATCTCCAGAAACAAAACTTCGAGGAACCATACGCGACATTAGACAA
CAAAATCACACAACAAGTCGAAGACCCATACGCAACAGTACCAGACAATA
TAAAAATAAGTAGTAAAGATCGAAAAGGTAAATCTCTTTTTTTTTAATGA
ATAGAAAATGTCTGTTAATAATAATTGTAGTTATATCGTTTTTGTTCAAG
TTCCTGTTCCCGTTCTGTTCATAGTGGTTCTTTGTGGAAACAATTCCTTA
GCTGTCTAAAAGCTTTTGAATTTTTTGGAGCATACCACTTAAAATATATG
TTATTATTATTACAAAGGTCCTTATTCTATGGCGAAAAGTAAAGAAGATA
CAGATGTGGAAAAGACTATAAAAGATATTGATGACCCGTACGCAACTATA
CAAGAAGGAGAACTAAATACAGAGGTAAGTTTCATAATCTTCGGTAAAAT
TTGCCAATAGACCAGCAGTCGAGGTAGTGAATTGTGTCACTTCGTGGGGC
ACCCCTTAGATCAGAGAACATTTGATATTACCTTTGATAAGTTCTATCGA
TTAGCTAAAAATCAATTCACTGCAAAATTGCAGGAAATTCAAAGGGTAAA
GTTCTTTTGCCAATTCTACACCCTGTTAGGAGCAGAATATCAAAAACTTC
CCCTGACCTAAGGGGTGCCCTACGAAAAATTGTTTTAAGGTATTTTCTTA
ATCCCGGACGCTGGGTTACAAAGCGCATTATTTCAAAGTCCATCAAACGT
TCGAAATGTTCATTTACTTATGTCGTACAGTCAACTCTCTCTGTCATTCG
ATTTTTCCCTAATTCGACCTAAGATATTGGTCTCATCAGCTGGAAAGAGT
GGTGTAAATTAGTTTCTGTAATTCAAATCTTTCTCTAATTCGAATTAAAT
AACTGACAGACTCTTAGATTTGAATCGTTCTTATTAACAAAAAATTGCAT
TTCATAGGATGACGGCAGTGACTATGAAAACGTAGAAGAATTCGAAAATG
GTAAAGAAAGCAAATCTTCCAATACCATTGAAGAAGAACCTATTTACTCC
AATATCCAAGAATCAAGAGATCGATCCAAAACCGTTCAACCACCATCATC
ACTGCATCTCAAACAACCTACCACACGTTCATACAGTAGTGGTAGCTTGT
CACCTCAAGCAGGTAGCGTGTCTCCTTCCAGTGGTCGCTGGTCTCCTGCG
AGTAGTGGAAGGGTTCCAGTTACCCCGACTCATGATTCACCTTCTACTAG
GAGATCTCCCTTACCTTCACCGATGTCTAACAGACCACCAATGCCAACAC
CTGAGTCACCCAGAAGAGGTAATACAAGACAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGATAGACAGACAGACAGACAGACAGACAGACATTAGAAATTCC
CAAATCTGTATTAGAAAATTAGAAAAACAGACAGAGAGATAACAGTTAAA
AACAAAACTAGAAAATCAAATTACAACAGTGTTCAAAGTTTTTCCGGATT
TCCGTACAAACCGACAAATAGTAGGGGGAAATTTGTTCGTTTTTTTGAGG
TCGCTCGACTTTTTTAGTCAAAGCACTTGTTATACATTTTTGGAAAGCTA
AGGGGTAGGGGAAGCAAAATAACTTGGGTGCCAATTATTTTTCGGACACT
TTGGTGTGATTTTCGGACAAATACGACGGTCTCAGGCAAAAATCATAGGG
TGAAAAATTAATGAAAATTTTAGCTTGAGAAAACGGAGACCTGTTGTATA
TTTTTGGTAAGCTCTCAAAAAATTAAGATTAGTGATATATTGCGAGTATA
GGTGATTTCTTTACCTAACTCGAGACAGTGTTTTTCAGTGTTTTTCAGCC
AGAAACAGCTGTTTTGTCCAGTTTTTGCGTTTTCGGAAGCTGAATATCTC
GAGTTAGGTACAGAAATCACCTATATTCGCAATATATCACTAATTTTAAT
TTTTTGAGAGCTTTCCAAAAATATACAACAGGTTTCCGTTTTCTCAAGCT
AAAATTTTCATTAATTTTTCACCCTATGATTTCTGCCCTAGACCGTCGTA
TTTGTCCGAAAATCACACCAAAGTGTCCGAAAAAAAATTGGCACCCAAGT
TATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATAACAAGTGCT
TTGACTAAAAAAATCGAGCGATTTTACAAATTTCCCCCTACTAAAATTAG
CTTGTTAAGAGAAAGATCCTGACCATCAAGTCTCCTCTCTGAGAGTTGAT
TTTAAGCATAAATCTCAAAATTATGTTTTGTAATGGAAGGAAGATATCAG
AAGTTCTCAACTTTGTAATGAGAGTGAATTTTCTTTAACGAGAATTAGAA
AAAATGAAATCTCTTATATATTCTTATATTCATCGTATTCTTAGAGACCG
CATACACTCCAGTTATAACAACCACAAGTTCGATAACCAACAAGGGAGAT
TTGGACAATGTAGACGGGCCTTTACCAAAGAACGCTAATCAAAAGGATAT
ACCAGATGCTACACCGTACAAATATGTTCCAAGACCTTCTTCACGAGCAC
AAGACCATCAGCATTCTCCTGACGAGGAACATTCTCCCATCGGGGAAGAA
ATTCGCCATCCTTCCCCAACTGGTGAGAACAACCATTACAAGGGCCGTAT
GTTCACGTATGCTCAACGGCCCGTAGAACAAGGAGTCATTTTGGACGTTC
AATCAAGTCCAACTAAAGGTGTCGATGGTGTTGAAGTGGAGAAAAGTAGT
TCCCCGGTTCAGATAACAATAGAAAAATCGGATTATCGTGATATTATTCC
AGAGAATAGCAAAGAGTGTGAAGTGCAGATAGAAAAGCTAGCACCAGAAG
ATGTGGAATATCAGCCTCGGGATTCACATTTCAAAGCTGAAGAAAATAAA
AAGTTGTCTCGTTTTTTCAAAAAATCTAATTCTCCTCATGTGCGGCGCCC
TGAACACGTGACTCATTCACCACGACATGATCGACATACGAAAGCAAGGA
GTGAGATGTTTATAGACCAAAGTCATTATCCAGAACAACCCGTTATGCCA
CGCGGTGGATGGTTTCAAAACGGTAATACCGAAATACGGAACAGCTGGAC
ACCGGAAGGAGCCTCGTTTTCCAATAATAACGGTCAATCATCTGGTCGTT
ACCCAGTGAATGGATCGTACAGGAAAAACGGGTATAACCGCTATTCTGCG
GTAGAACCATACCAATATAGAGATGGATACAAAGAGAGCCCTCTCAGGGA
TAGAAGAGCAATGCAACCAGACAACGGGAAGAAGAAACTACGCCGGACAC
GCTCAGATCATACGGAAACATCTGAAACTAAAAAGAAAGAACATACGTCT
AATAAATTTATCGGGTTCTTCCGGGCAGCTAAAAAGACAATCCGGAGAAG
CAGAACTACGGACCCATCCCGTGGTGCGGAACACTATTCGCAAAAAAGGC
AAGACGTTTATGAGAAAGAGATTGCAGAAATCTAA

Coding sequence (CDS) from alignment at sc0000059_pilon:1418072..1423856-

>XLOC_014934 ID=XLOC_014934|Name=XLOC_014934|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4692bp|location=Sequence derived from alignment at sc0000059_pilon:1418072..1423856- (Clytia hemisphaerica_ch_hm2_pilon)
AAATCTGCAAGCAGGGAATCATCATCGGACAGACCACCTGTCCCCCTACC
ATATAGCGGGTGGAAGGGGGCAGCAGACCTACAGTTGGGGGCTACAGCAA
GTCAGGAGGGTAAAGCGGACGTCTTTGTACAAAGCTCAGACCTTCTTGAT
GAGAATGGTAACCCTTTGTATGAACCCGTTATCAGTACAAAGAAAACAAT
TTCAAGGGGAGCATCCGTGTTATCTGACAGTGGAATTTCTTCTGAACCCT
CACCTGATGCATTTAAAGAGGAACCTATCTACGCATTACCAGAAGTCAGC
CCACAACGTCAAAGAAAAAATCTGCAAGCAGGGAATCATCATCGGACAGA
CCACCTGTCCCCCTACCATATAGCGGGTGGAAGGGGGCAGCAGACCTACA
GTTGGGGGCTACAGCAAGTCAGGAGGGTAAAGCGGACGTCTTTGTACAAA
GCTCAGACCTTCTTGATGAGAATGGTAACCCTTTGTATGAACCCGTTATC
AGTACAAAGAAAACAATTTCAAGGGGAGCATCCGTGTTATCTGACAGTGG
AATTTCTTCTGAACCCTCACCTGATGCATTTAAAGAGGAACCTATCTACG
CATTACCAGAAGTCAGCCCACAACGTCAAAGAAAATTCAAGCCATCCAAA
CCAGCCCCGTACCAGCATAGTAACAACCACACAACCTCGTCAAACGGATT
CTCAATGTCGGTTACTGAAGACCCATATTCATCCATAAATGACGGCTTGA
AACCTAATGGCGGTGATCCAGATGATTTGCTGTCTTCTATCAACGATAGT
CTTAAACCGAAAAATATCTCCGTGTATAAATCCAATCTGACTTTGGATGA
AGCAGACAATGATGAAGGTGCTATGGAAGACACTTATGCTTCTATTGATC
AGATTCAAGCCATCCAAACCAGCCCCGTACCAGCATAGTAACAACCACAC
AACCTCGTCAAACGGATTCTCAATGTCGGTTACTGAAGACCCATATTCAT
CCATAAATGACGGCTTGAAACCTAATGGCGGTGATCCAGATGATTTGCTG
TCTTCTATCAACGATAGTCTTAAACCGAAAAATATCTCCGTGTATAAATC
CAATCTGACTTTGGATGAAGCAGACAATGATGAAGGTGCTATGGAAGACA
CTTATGCTTCTATTGATCAGAACGATTCAAAAATAGAATCTACCATCAAC
ATCAAGCCTAAAAAAACAGTGGAGGATCCTTATTCTCTGGTTAAAGATGA
TCTCCAGAAACAAAACTTCGAGGAACCATACGCGACATTAGACAACAAAA
TCACACAACAAGTCGAAGACCCATACGCAACAGTACCAGACAATATAAAA
ATAAGTAGTAAAGATCGAAAAGAACGATTCAAAAATAGAATCTACCATCA
ACATCAAGCCTAAAAAAACAGTGGAGGATCCTTATTCTCTGGTTAAAGAT
GATCTCCAGAAACAAAACTTCGAGGAACCATACGCGACATTAGACAACAA
AATCACACAACAAGTCGAAGACCCATACGCAACAGTACCAGACAATATAA
AAATAAGTAGTAAAGATCGAAAAGGTCCTTATTCTATGGCGAAAAGTAAA
GAAGATACAGATGTGGAAAAGACTATAAAAGATATTGATGACCCGTACGC
AACTATACAAGAAGGAGAACTAAATACAGAGGTCCTTATTCTATGGCGAA
AAGTAAAGAAGATACAGATGTGGAAAAGACTATAAAAGATATTGATGACC
CGTACGCAACTATACAAGAAGGAGAACTAAATACAGAGGATGACGGCAGT
GACTATGAAAACGTAGAAGAATTCGAAAATGGTAAAGAAAGCAAATCTTC
CAATACCATTGAAGAAGAACCTATTTACTCCAATATCCAAGAATCAAGAG
ATCGATCCAAAACCGTTCAACCACCATCATCACTGCATCTCAAACAACCT
ACCACACGTTCATACAGTAGTGGTAGCTTGTCACCTCAAGCAGGTAGCGT
GTCTCCTTCCAGTGGTCGCTGGTCTCCTGCGAGTAGTGGAAGGGTTCCAG
TTACCCCGACTCATGATTCACCTTCTACTAGGAGATCTCCCTTACCTTCA
CCGATGTCTAACAGACCACCAATGCCAACACCTGAGTCACCCAGAAGAGG
ATGACGGCAGTGACTATGAAAACGTAGAAGAATTCGAAAATGGTAAAGAA
AGCAAATCTTCCAATACCATTGAAGAAGAACCTATTTACTCCAATATCCA
AGAATCAAGAGATCGATCCAAAACCGTTCAACCACCATCATCACTGCATC
TCAAACAACCTACCACACGTTCATACAGTAGTGGTAGCTTGTCACCTCAA
GCAGGTAGCGTGTCTCCTTCCAGTGGTCGCTGGTCTCCTGCGAGTAGTGG
AAGGGTTCCAGTTACCCCGACTCATGATTCACCTTCTACTAGGAGATCTC
CCTTACCTTCACCGATGTCTAACAGACCACCAATGCCAACACCTGAGTCA
CCCAGAAGAGAGACCGCATACACTCCAGTTATAACAACCACAAGTTCGAT
AACCAACAAGGGAGATTTGGACAATGTAGACGGGCCTTTACCAAAGAACG
CTAATCAAAAGGATATACCAGATGCTACACCGTACAAATATGTTCCAAGA
CCTTCTTCACGAGCACAAGACCATCAGCATTCTCCTGACGAGGAACATTC
TCCCATCGGGGAAGAAATTCGCCATCCTTCCCCAACTGGTGAGAACAACC
ATTACAAGGGCCGTATGTTCACGTATGCTCAACGGCCCGTAGAACAAGGA
GTCATTTTGGACGTTCAATCAAGTCCAACTAAAGGTGTCGATGGTGTTGA
AGTGGAGAAAAGTAGTTCCCCGGTTCAGATAACAATAGAAAAATCGGATT
ATCGTGATATTATTCCAGAGAATAGCAAAGAGTGTGAAGTGCAGATAGAA
AAGCTAGCACCAGAAGATGTGGAATATCAGCCTCGGGATTCACATTTCAA
AGCTGAAGAAAATAAAAAGTTGTCTCGTTTTTTCAAAAAATCTAATTCTC
CTCATGTGCGGCGCCCTGAACACGTGACTCATTCACCACGACATGATCGA
CATACGAAAGCAAGGAGTGAGATGTTTATAGACCAAAGTCATTATCCAGA
ACAACCCGTTATGCCACGCGGTGGATGGTTTCAAAACGGTAATACCGAAA
TACGGAACAGCTGGACACCGGAAGGAGCCTCGTTTTCCAATAATAACGGT
CAATCATCTGGTCGTTACCCAGTGAATGGATCGTACAGGAAAAACGGGTA
TAACCGCTATTCTGCGGTAGAACCATACCAATATAGAGATGGATACAAAG
AGAGCCCTCTCAGGGATAGAAGAGCAATGCAACCAGACAACGGGAAGAAG
AAACTACGCCGGACACGCTCAGATCATACGGAAACATCTGAAACTAAAAA
GAAAGAACATACGTCTAATAAATTTATCGGGTTCTTCCGGGCAGCTAAAA
AGACAATCCGGAGAAGCAGAACTACGGACCCATCCCGTGGTGCGGAACAC
TATTCGCAAAAAAGGCAAGACGTTTATGAGAAAGAGATTGCAGAAATCTA
AAGACCGCATACACTCCAGTTATAACAACCACAAGTTCGATAACCAACAA
GGGAGATTTGGACAATGTAGACGGGCCTTTACCAAAGAACGCTAATCAAA
AGGATATACCAGATGCTACACCGTACAAATATGTTCCAAGACCTTCTTCA
CGAGCACAAGACCATCAGCATTCTCCTGACGAGGAACATTCTCCCATCGG
GGAAGAAATTCGCCATCCTTCCCCAACTGGTGAGAACAACCATTACAAGG
GCCGTATGTTCACGTATGCTCAACGGCCCGTAGAACAAGGAGTCATTTTG
GACGTTCAATCAAGTCCAACTAAAGGTGTCGATGGTGTTGAAGTGGAGAA
AAGTAGTTCCCCGGTTCAGATAACAATAGAAAAATCGGATTATCGTGATA
TTATTCCAGAGAATAGCAAAGAGTGTGAAGTGCAGATAGAAAAGCTAGCA
CCAGAAGATGTGGAATATCAGCCTCGGGATTCACATTTCAAAGCTGAAGA
AAATAAAAAGTTGTCTCGTTTTTTCAAAAAATCTAATTCTCCTCATGTGC
GGCGCCCTGAACACGTGACTCATTCACCACGACATGATCGACATACGAAA
GCAAGGAGTGAGATGTTTATAGACCAAAGTCATTATCCAGAACAACCCGT
TATGCCACGCGGTGGATGGTTTCAAAACGGTAATACCGAAATACGGAACA
GCTGGACACCGGAAGGAGCCTCGTTTTCCAATAATAACGGTCAATCATCT
GGTCGTTACCCAGTGAATGGATCGTACAGGAAAAACGGGTATAACCGCTA
TTCTGCGGTAGAACCATACCAATATAGAGATGGATACAAAGAGAGCCCTC
TCAGGGATAGAAGAGCAATGCAACCAGACAACGGGAAGAAGAAACTACGC
CGGACACGCTCAGATCATACGGAAACATCTGAAACTAAAAAGAAAGAACA
TACGTCTAATAAATTTATCGGGTTCTTCCGGGCAGCTAAAAAGACAATCC
GGAGAAGCAGAACTACGGACCCATCCCGTGGTGCGGAACACTATTCGCAA
AAAAGGCAAGACGTTTATGAGAAAGAGATTGCAGAAATCTAA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_014934	XLOC_014934-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000059_pilon	genome	sc0000059_pilon:1418072..1423856 -

Properties


Property Name	Value
Aaloc	2815-3903:1090
Aaloc	2527-2811:2954
Aaloc	2455-2526:3029
Aaloc	2350-2454:3667
Aaloc	2146-2346:4061
Aaloc	2047-2145:4952
Aaloc	1876-2043:5120
Aaloc	1558-1872:5786

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XLOC_014934 (mRNA) -