XLOC_014578 (mRNA) -

Overview
NameXLOC_014578
Unique NameXLOC_014578
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000401_pilon:95621..96803+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014578 ID=XLOC_014578|Name=XLOC_014578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1183bp|location=Sequence derived from alignment at sc0000401_pilon:95621..96803+ (Clytia hemisphaerica_ch_hm2_pilon)
TACGTCATCAAAATTGCAGACTTCGGATTGGCTAGAAGTCTTAATAATGC AGACTATTACCAAAAGACTACAAACGTAAGTAAAACACACCCTTGTATCA TTGATTCCAAtaatgtataaaaataaaaggaatATCGGaactcgaaattt tttttgctgagaCGTCCTACTGCAACGCAACAAAGCACCTTGCGGGGCAA TGACACGgaaatcagcaaaaaagaaaaaatttctctagaaaaagaacttt ttcaatataatttgagttaacttttcaaattttttttgttctagGGTCGG TTTCCAGTCAAATGGGTTGCTATTGAAGCACTTTTAGACCGTGTATACAG TACGCAATCAGATATATGGGCGTATGGCGTGTTGTTATGGGAGATTTTCA CTTTGGGTGGAACACCCTACCCACGAATACCGGTTCAAGATCTTTATAAA GTGTTAAAAGACGGATATCGAATGAAAAGACCGAAAAGTTGCCCTCCTCT AATGTAAGTGTGAAACAAAAACTCTGGTTTTATCCTTACTAACATAGAAG GCATTGGTCCAGTCGATGGGGAAGGGACAGGGGCATGGCATCTTCAACCT TACTTTTACCTAACTATGGGTAGTTAAATTTCTGTTTACAAATTCAAACC AGCTTTGGTTCGTGCCACCCtggttttttacactttttcacAATGTCCAC AAAAAATACATTCTCCGTCTTTTTACAGTTATGAAATTATGGGTAAATGT TGGATCGAGGAGCCGTCAAAAAGACCGTCTTTTAGTGAACTTGTCGCTCA TATGGAATCGCTGTTGGATGAATTAACCTCTgatgtatgatttttttcta aatctacCCTTGGTTATGAAATTTCTCCAGAGAATTcgtgtaaaaaaata attttgcaatATCTTTTGGGTTGGTGGTTGTAAAATATCAGCAGGTTTTT GCGCAATTATTAGTGAAAATTACTGTCTTATTTCCAAGTAATACAAAAGa ttctttcaacgttcatctaacgtcatATAGACGTTTAAGATGGACTAGAG GTCCCCCAAGAGAACACGAATGCAGGTATCTGTAAATTAagaattcattt tcaattttcaggataTATTCGAATTCAAGTCACCAGATGGTAGCCTTGAC AACCAAGAGCTTGAAACTGACGAAGAGAACGAG

Coding sequence (CDS) from alignment at sc0000401_pilon:95621..96803+

>XLOC_014578 ID=XLOC_014578|Name=XLOC_014578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000401_pilon:95621..96803+ (Clytia hemisphaerica_ch_hm2_pilon)
TACGTCATCAAAATTGCAGACTTCGGATTGGCTAGAAGTCTTAATAATGC
AGACTATTACCAAAAGACTACAAACTACGTCATCAAAATTGCAGACTTCG
GATTGGCTAGAAGTCTTAATAATGCAGACTATTACCAAAAGACTACAAAC
GGTCGGTTTCCAGTCAAATGGGTTGCTATTGAAGCACTTTTAGACCGTGT
ATACAGTACGCAATCAGATATATGGGCGTATGGCGTGTTGTTATGGGAGA
TTTTCACTTTGGGTGGAACACCCTACCCACGAATACCGGTTCAAGATCTT
TATAAAGTGTTAAAAGACGGATATCGAATGAAAAGACCGAAAAGTTGCCC
TCCTCTAATGGTCGGTTTCCAGTCAAATGGGTTGCTATTGAAGCACTTTT
AGACCGTGTATACAGTACGCAATCAGATATATGGGCGTATGGCGTGTTGT
TATGGGAGATTTTCACTTTGGGTGGAACACCCTACCCACGAATACCGGTT
CAAGATCTTTATAAAGTGTTAAAAGACGGATATCGAATGAAAAGACCGAA
AAGTTGCCCTCCTCTAATTTATGAAATTATGGGTAAATGTTGGATCGAGG
AGCCGTCAAAAAGACCGTCTTTTAGTGAACTTGTCGCTCATATGGAATCG
CTGTTGGATGAATTAACCTCTgatTTATGAAATTATGGGTAAATGTTGGA
TCGAGGAGCCGTCAAAAAGACCGTCTTTTAGTGAACTTGTCGCTCATATG
GAATCGCTGTTGGATGAATTAACCTCTgatgataTATTCGAATTCAAGTC
ACCAGATGGTAGCCTTGACAACCAAGAGCTTGAAACTGACGAAGAGAACG
AGgataTATTCGAATTCAAGTCACCAGATGGTAGCCTTGACAACCAAGAG
CTTGAAACTGACGAAGAGAACGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014578XLOC_014578-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401_pilongenomesc0000401_pilon:95621..96803 +
Properties
Property NameValue
Aaloc391-462:1112
Aaloc286-390:730
Aaloc76-282:295
Aaloc1-75:1