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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:739520..742849+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014325 ID=XLOC_014325|Name=XLOC_014325|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3330bp|location=Sequence derived from alignment at sc0000083_pilon:739520..742849+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGCTAAATTGTCAAACAATTTTCATATTATGGATGGGAATTTT
CGGAGCATTAGCAACAGCAAGACTGACACACAGGTAACTCATTCTTCAAT
CGGTAGAACCCAGGTCCCTACAAAGTTTCAATTTATTTATCATCCTGCGG
TTAAAAGTgtccttaaaaattaaaatattccgTTGCCGTACACCCGACCG
TTACAACCaagctaaaaatgttcttaaaaatatgttcttatttttgccat
tttttgagtatttttgttcattttcctatgaaattcggCGTTCTAGAGTC
CACATACTTtagaagccttaaaatgtacttaacttgttcttaacatttcg
gtcatcgaagccttatgttcttatagttacagtttgttcttataaaaaac
gcgtaTTGAAGGATTGTGTTCATTTTCTTTAGATATTGTACAGACGGTAG
TTTGGAAAGCCTGACGGAGTATTACAGTGTTCGATTATCGCGCCAAGCAG
TATGGTATTATTACTATACATGTTGCAGTACTTCATGGACTGGTGCTTGC
AATGGATATTGTCATCAAACACGGTAAAATTCTTTACGGCTCTCCAAAAT
GTTTATTTAGTCTAAAAGTTACACTAGGTTCTGGCCGTATTAAGAGTCAA
AGagataaaatcttttaaaaaattaggaaaaattcTTATAGTTAGCCTCT
TCACTTAAAggtattgtttttaaataagagtgatatcgtttgcttactca
tcaattttataattcacaagctttttcacgttGGATTAACACAGATGTAT
AAGTAGCAAAATTgtcagaataaaataaaataacataaaataaaataaat
aaaataaaataacaataggcagacactgtcccggtatgaaatatgtgtct
gaaatgaaacgggaacacttatgtgaaattaaaacctttaaactgGCACA
CCAGCTGAACTGGAACGATATCATGCAGAAAAAATGAGCCTATGAAGAAA
ATATACCAAAGGGAGAAATTGAAAAGCCCCTGTTAAAATTCAATGTTAAT
CAACaacctctcaccaacttttgctcgtccTTCTGCGCAGCTGCTTTTTT
AAGCAAACGCCCACCGCccttatgttcccgccctctgacaaaAACGTTTT
TAAGTGACTTAACTTAGGGTTGGAAAGTAGTTGAGTTTTCACAGGAAACT
TAAGACTGACGTATAACGTTAAAAGCTTGTGAATGGTCCTACTAGGctaa
gaatatagcctggaagccattactcccctcccaaatcgaaatatccgtgt
aaaaaaagtagaaagtctgaaaatgtcattcttgtccgaactttaaattt
tgcaaaaccatgattgtagtataGGTCAGATCTGTCGTGAAGAtgaatct
tttcattttttgataatttcagaTATACGTACGACTATTACTACGGTCAA
CGTACACGTGCGATATACCGTTTAAGACGATTCTGTTGTCCGGGATATAC
CCAGTCCGGTACAACGTGTATAGGTAAGTTTCGCAATGGTTGCTCAGTTT
AGTATGTTAGTATTTCCCATCCTTAATTCCTCTGAAAATCCAATGTTACT
ccggtaaaaaaaattatcggcAAAAACTAGTCGGCTAAAAATGACGAAAG
TTTTTGCTGACGAATTTTTTCCTTCCAATGATATTTTTTACCAACGTATT
TTCTACCCACGATGTACTATATCGATtcgaaaaaaacattgattcaATCA
TCGTCCCTAAGTTAGTGCAGCCATATagtgaagaaataaaaatttctgtc
caactatattcactcaggagatatgagtggcagagcagcatatgcctTTC
GTCCTTATTAGCACTGCgtactgcatactgcaccctggctggTTAGATCG
ATTTAGCCAACATCTCTAAAACCACAAAATCACTTATGGTTCAAACTGAG
AGAAATAGTTTAAGTAAtaatagtttttgatatttgtaTGAAGGCGATGG
GACATGGTCAGCTTGGGGTGCTTGGGGCCTTTGCACTCAGGATGGAATCG
ATGGTTTTCAGAAGAAGAAACGTGTCAGAACGTGCACAGGTGGAGCATGT
TCACACGGTGaagaagaacaattttccaaagagTGTTCAAATACTTGTAA
GTCTATATACGTTTTTTAGtcagaacatccaaaatttttgaagccttggg
atgctcttaattttttgagattaagcctaaaaatattcttaacatgttct
tacatTCAACATttcttgagtatttttgtccatcttCCTAaagaatcggg
tgttttagagcccgtaaagccttaaaatattcttaacttgttctcaatat
tttggtcatcaaagccttatcttcttatatagtttgtttttataaaaaaa
cgtgaattaaatctttaaaaactgCTGGTAAGACTAGcaaatacacactt
tttttataagaaccaataatTTTTGGCTCAGACTAGGCTAACTgttaatc
ttttgaaattttatggcTTCTTGCGATGCTCTTAAAACGCTTAgtttttt
tacttaaaacaaaagatggGTTGAAAATATGTCAAAATGTGTGTAATTTC
TGACATCTGAgtctcagattgttcttaatttgtgcTTAGGTTTCGGCCAA
TTgcaagcctcgtgttcttataaatattttcgtaaaaaaaaacgtgtatc
tgctttttttGAGACACAGagacgcgggaatagtgctggCAAAAAaccct
tataaaaaaacatcgtTGCGGGAAAGTGATTTGGTTTGTATTCAGCGAAT
GTAATGAGTGTGTGCTACTAGCGTAAATGTAGCAAATACAAGGTTTATTT
GTTTATAGACTGATATTGTTAAATCGTTTGATGTACCTTGAAGCCTTGGT
TGGTTAATTCTGGATAGGTCGGGAGGAATAAAGaagaattaatatttttt
tgtctcgAGACACAAAAAGGGTTTTGGTAATTTTTAAGATAATAGAAATA
ATTGGGATGAGAGGTATAATAATTTGAAGACGATATCAGTGCAAATTCAC
TTCATTTTAGATCTGGGTACTGGGTTCAGTAGACTTCGTGTAATAATTTA
AGGTACAGAGAGGTCAAAATACGATATCAGTGCAAATTCACTTCATTTTA
GATCTGGGTACTGGGTTCAGTCGACTTCGTGATCATCCACAATGTGAGGA
CGAAACATGTAAACCGAAAACTAAACAAGATGGTACCATTCTGCTTAACT
TGTACAGATTCCGCTTGGCTTCACCACTGCGTTCCTTACAGATGTACATC
TTCTCAAAACAAACCACAAACGGCCATTAT Coding sequence (CDS) from alignment at sc0000083_pilon:739520..742849+ >XLOC_014325 ID=XLOC_014325|Name=XLOC_014325|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000083_pilon:739520..742849+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGCTAAATTGTCAAACAATTTTCATATTATGGATGGGAATTTT
CGGAGCATTAGCAACAGCAAGACTGACACACAGATGAAAAAGCTAAATTG
TCAAACAATTTTCATATTATGGATGGGAATTTTCGGAGCATTAGCAACAG
CAAGACTGACACACAGATATTGTACAGACGGTAGTTTGGAAAGCCTGACG
GAGTATTACAGTGTTCGATTATCGCGCCAAGCAGTATGGTATTATTACTA
TACATGTTGCAGTACTTCATGGACTGGTGCTTGCAATGGATATTGTCATC
AAACACGATATTGTACAGACGGTAGTTTGGAAAGCCTGACGGAGTATTAC
AGTGTTCGATTATCGCGCCAAGCAGTATGGTATTATTACTATACATGTTG
CAGTACTTCATGGACTGGTGCTTGCAATGGATATTGTCATCAAACACGaT
ATACGTACGACTATTACTACGGTCAACGTACACGTGCGATATACCGTTTA
AGACGATTCTGTTGTCCGGGATATACCCAGTCCGGTACAACGTGTATAGa
TATACGTACGACTATTACTACGGTCAACGTACACGTGCGATATACCGTTT
AAGACGATTCTGTTGTCCGGGATATACCCAGTCCGGTACAACGTGTATAG
GCGATGGGACATGGTCAGCTTGGGGTGCTTGGGGCCTTTGCACTCAGGAT
GGAATCGATGGTTTTCAGAAGAAGAAACGTGTCAGAACGTGCACAGGTGG
AGCATGTTCACACGGTGaagaagaacaattttccaaagagTGTTCAAATA
CTTGCGATGGGACATGGTCAGCTTGGGGTGCTTGGGGCCTTTGCACTCAG
GATGGAATCGATGGTTTTCAGAAGAAGAAACGTGTCAGAACGTGCACAGG
TGGAGCATGTTCACACGGTGaagaagaacaattttccaaagagTGTTCAA
ATACTTATCTGGGTACTGGGTTCAGTCGACTTCGTGATCATCCACAATGT
GAGGACGAAACATGTAAACCGAAAACTAAACAAGATGGTACCATTCTGCT
TAACTTGTACAGATTCCGCTTGGCTTCACCACTGCGTTCCTTACAGATGT
ACATCTTCTCAAAACAAACCACAAACGGCCATTATATCTGGGTACTGGGT
TCAGTCGACTTCGTGATCATCCACAATGTGAGGACGAAACATGTAAACCG
AAAACTAAACAAGATGGTACCATTCTGCTTAACTTGTACAGATTCCGCTT
GGCTTCACCACTGCGTTCCTTACAGATGTACATCTTCTCAAAACAAACCA
CAAACGGCCATTAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:739520..742849 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-657:3154 |
| Aaloc | 328-477:1996 |
| Aaloc | 226-324:1424 |
| Aaloc | 85-222:434 |
| Aaloc | 1-81:1 |
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