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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:405311..408455- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013768 ID=XLOC_013768|Name=XLOC_013768|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3145bp|location=Sequence derived from alignment at sc0000182_pilon:405311..408455- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCAGTTCAAA
GTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTTGTACTAT
CAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAAAGATGGA
TCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGACATTGCCG
TGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCACGAAAATG
TCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAATTGACGAT
CCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTGTTGAAGA
ATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGAAAACTTT
CACTGGACACTACGAAATTGTTTTTATATCAACTTTTAAGAGGATTGAAA
TATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAGGAAATTT
ATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTACGGACTTG
CAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAACTGCTGTT
GTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATTTGGGTGA
CTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTTGCTGAAA
TGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGATCAACTC
AATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCCTCACAGA
AACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCAGAAGGTA
ATAAATTATTTTACTTTAGTTGATTTTAATTCATTGCACAATGTGTGTAG
CCGGTTTCAAATGCATTTATTATGGACATTTCGAAATTCTGAAAATGTCG
TGATTAAATTTTTAAACACAGCCATATTTTCTTTTCTCAACTTTTTTCAG
CGTTCATTCATTTTGTTTGTATAGCATTTCAATAAAATTTTGAAAGTTAT
TGTTTCTCTGAACCCAAAAATATCTCATCCTCTGAATTTTTTAAGAGTTT
GTGCTGAATGTTTTATAAAAAGCTCATTCATGAAAAATCCATTAATTTAG
AAATCCAGATGAGTAAAAATAATTTTTTTCTAAATTTGAACTGAAACATT
TCTAAATCTCGTAAAAAGTTATACAAAATTTATCAATACGTAGGTATTGA
TCCCCTCCTATGAAACTGTTTTTATTTGACACAGATCAAGATATGAAAAA
ATCTTTTTTCTCTCTTTCTCTCAAAAAAAAAATTGAGAAAAATTCTCTCG
TCTGGTCAAGGTCCAGTTGAGAGGGTGATTCCCTGACTTTTAATTATTAT
CATCCTGTCGCGTTTTTTATCTTTCTTTGTTCCTTCAATGTTTAAATTAC
AGAACAACCGAACAGAATCTAGAAAGGATATGAAATTATTAAAAAACCAG
CTGTTTAGGCTTATCAATGTTCGAGTTTTCTAGAAAAGAATATACACCTG
GAAATACATGAGAAAAAAAGGAAAAAAAAGAGAAAAATTTTCAGCCTTCC
GAAGATGGGATGAAAAAGAAAAAAAAAGTTTGATAAAGTAAAGAAAAAAT
GTTTTCATTATACAAAAAGAAAAAATGATGAGAAAAGAAACCATGACTCA
GACTTAGTAAGTGAAAACCACTGTTTTGGAGAGAGAGCTTAGTCATAACT
TTCATAACCTAGTTTCTAAGCCGCCTTTCTCACTCTATCTGTTTGAGATG
ATATCAATATATCTTTATAGCTTAGAAGAAAAGCTTTAATTTCCTTGACA
TCCGGCTACACAAATTCATACATTGTTGTTTGGTCAACTCAGTAATTGAA
TCCTTTTCGAAAAAAAACGTTATTAACCCGTTAGTAATCCGTTTTTGTTT
AGAGACAAAAACAGATAAGGATTTTCACAAGCCCACCACCCAAGACATAA
CATAAGAAATTTTAATAAAGCTGTTATATTTTGACTCATCATTTTCTCAT
TTTTTTATCTTTACAGCAATCGATTTGCTCTCTCGAATGTTATGTCTCGA
CCCTGATGAACGAATTACAATTACTGAAGCATTACAACACCCCTTCTTAT
CCGAATTACACGATCCAATCGATGAACCAATTTGCGAATACCCGTTTCAA
ATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAAAACGTAAAAT
TCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCGTACCATTCGT
CAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTCATGTTATTGT
CCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACACGCAATCGTTT
GAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATGTGGAGTTCGA
ACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAAAAGATACCAA
GAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTTTACCATCCTT
ACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAACCGTTCCGTG
ATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTCGGCTCCCGTG
AAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACTTTTCATATTT
CTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGTTACAATTTAA
ACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAATAACACCAAA
GTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAGGGGACCATGG
ACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCGTCCTTGAAAA
AGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAACTTTCACTGAA
ATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTATTGACGAATT
ACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAACGTCACACGG
CCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATTGTCAAATTCC
TCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGATTTGA Coding sequence (CDS) from alignment at sc0000182_pilon:405311..408455- >XLOC_013768 ID=XLOC_013768|Name=XLOC_013768|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0000182_pilon:405311..408455- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCAGTTCAAA
GTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTTGTACTAT
CAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAAAGATGGA
TCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGACATTGCCG
TGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCACGAAAATG
TCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAATTGACGAT
CCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTGTTGAAGA
ATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGAAAACTTT
CACTGGACACTACGAAATTGTTTTTATATCAACTTTTAAGAGGATTGAAA
TATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAGGAAATTT
ATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTACGGACTTG
CAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAACTGCTGTT
GTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATTTGGGTGA
CTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTTGCTGAAA
TGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGATCAACTC
AATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCCTCACAGA
AACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCAGAAGATG
CCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCAGTTCAAAGTT
TTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTTGTACTATCAG
GAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAAAGATGGATCA
CAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGACATTGCCGTGT
CGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCACGAAAATGTCG
TAAAAACATACAAAATTACAGACTCAAACGGATCAACAATTGACGATCCA
ACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTGTTGAAGAATT
ACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGAAAACTTTCAC
TGGACACTACGAAATTGTTTTTATATCAACTTTTAAGAGGATTGAAATAT
ATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAGGAAATTTATT
CGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTACGGACTTGCAA
GAGTTTTTGATAATCGATACGAACACAAAGGATATTTAACTGCTGTTGTT
TCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATTTGGGTGACTA
CAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTTGCTGAAATGT
TATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGATCAACTCAAT
GTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCCTCACAGAAAC
TAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCAGAAGCAATCG
ATTTGCTCTCTCGAATGTTATGTCTCGACCCTGATGAACGAATTACAATT
ACTGAAGCATTACAACACCCCTTCTTATCCGAATTACACGATCCAATCGA
TGAACCAATTTGCGAATACCCGTTTCAAATCGAACACGAAATCGATAATC
TACCCGTCAAAATCTTAAAACGTAAAATTCTTCGAAATTCCTGCGTCAGC
TCTTACGAAAAGAAATCGTACCATTCGTCAGAGGAAAACCTTTTTAAAGA
CTTTGACGAGACCTTCTCATGTTATTGTCCAACTGAATCAGTTAGCCGTA
GGAACAGTAAAAATACACGCAATCGTTTGAGTGTCGTTACAAAGTTCAAT
TCACATGGTGAAGAGATGTGGAGTTCGAACACAAATTCATCGGTCGAATC
TCCTACTCATGATTATAAAAGATACCAAGAAGATCTCCCAAAAATTACAT
CTGAAAGCGAAGTCTTTTTACCATCCTTACAAGACGCGATGAGTTCTTGT
CAAGTCCTGATCGACGAACCGTTCCGTGATCCAGGAGTCTGTTCCCGTAT
GTACCACGAGGATGATTCGGCTCCCGTGAAAAGCAACCAATTTTTATCCG
CGGACACTTCAAACGACTTTTCATATTTCTCAGACTTATCACCTGTGATT
GATCTGAGTGAACCGTGTTACAATTTAAACGAAAAGAAGAAAGACTTGAA
TAATAATAATGGTAGCAATAACACCAAAGTTAGCAATAATAATAAAATGG
AAACGGCTCCTTTTTTAGGGGACCATGGACGCTCCAGCGCCATCAGTATC
GAAAGTAAAAAATCTCCGTCCTTGAAAAAGGTACGTGAGACCACTGTTAA
AAATGGTCACACTTCAACTTTCACTGAAATTAAATTTGAAAGTTCAACAC
CGACAAACTGTAAAAGTATTGACGAATTACGGGATTTGAATAGTGAGATT
TTGCGCACGCTCAATGAACGTCACACGGCCTCGAAATGTAATTTTCAAGC
CATGATTACGGACAGATTGTCAAATTCCTCGAAACATTTTTCGCATTGGG
ATTCTTTGAAATTATGGATTTGACAATCGATTTGCTCTCTCGAATGTTAT
GTCTCGACCCTGATGAACGAATTACAATTACTGAAGCATTACAACACCCC
TTCTTATCCGAATTACACGATCCAATCGATGAACCAATTTGCGAATACCC
GTTTCAAATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAAAAC
GTAAAATTCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCGTAC
CATTCGTCAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTCATG
TTATTGTCCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACACGCA
ATCGTTTGAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATGTGG
AGTTCGAACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAAAAG
ATACCAAGAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTTTAC
CATCCTTACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAACCG
TTCCGTGATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTCGGC
TCCCGTGAAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACTTTT
CATATTTCTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGTTAC
AATTTAAACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAATAA
CACCAAAGTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAGGGG
ACCATGGACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCGTCC
TTGAAAAAGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAACTTT
CACTGAAATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTATTG
ACGAATTACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAACGT
CACACGGCCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATTGTC
AAATTCCTCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGATTT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:405311..408455 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 850-1926:1078 |
| Aaloc | 1-846:3146 |
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