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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000453_pilon:125171..128713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013303 ID=XLOC_013303|Name=XLOC_013303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3543bp|location=Sequence derived from alignment at sc0000453_pilon:125171..128713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGTTGCAATTCATTTTTTGGTTCAATCATTTATCAGTTCATCTGT
TGTGGTGAAATCAGCATGCGGAGTTATTGTGACGGCTTATCTGATTGGAT
TGATCCCTAATGCTTACGGTGTACTGTCTATCACTCCGGCACTGTTAGTT
TTATTTCTTCAATTCTCAACTTCAGTTGAACTAGAATCTGAATGTCTGTC
AGTGTGTCTGCCAAAGTTTTTGGGGTAGCCTGAAATTTGAAACACTTTTT
CCTTGGGTGAATATCTGGGGGCGTTTTCTTTCATTTTTCAAAAAATTTTG
AGGCCTGGGTTTGGTTTGCTACAATCGGGCCATAGGCCATAGTTACTGAA
ATTGAGCCCAGTGCGTTGTGCATGTTCGACTATTTGTATAATTCCCTTGA
ATCCTTTTACATTTACCATCAGTGAGTCGGCTTTGCCCGAGACGTTAGTT
TCAACATTCTTATAAGGTTATATGGACGTTATGAATGTTAGATAGGCAAG
AAGCAACATTTTGTGACAGTTGGGTGAGTGTCAAACTCAAAATACACAAT
TTCCAAGTCATTCTGATCGTCTATTATTTTTAAGAAGTTCGAGTACAGTA
ATAGATAGAGAAATTCCATTCAGACAAATTGGCATTTATTTTTATATTTG
TAGATTACTACCACCAAATTTTCAAGTGTGGACACTTGTTACTGGTCTCG
TCGTAGAGAGAAGTATCATAAATGTAAGAATGATTTACACAGTTTTTTTA
TAAGAACAAAATATAAGAACACGAGGCTTCGATGGCCAAAATGTTATGAA
CAAGTTAAGAATATTTTAAGGCTTTGCGGACCCTAAAACACCTATTTTCT
TAGGAAAATTGACAAAAATACCCACAAATGGTGAAGAAGAACATGTTAAG
AACATTTTTAGGCTTTAAACTCAAAAAGTTAAGAGCATCCAAAGGCTTTT
GAAAAACGTGTAATTGTTGTTATAATTGTAATCTTTTGTTTCATGTATTG
TGGATAATCTCTGCAACGTTTTTTTACTCTTTTTTAGGTACTGATTAATT
TACCCGCTATCATTTTATGTGGACAACATTTGGAACCGTTATGGGGTGCC
TTAGAACTTTTAGTAAGCCTCATTTTTTTTGTAAAAGTACAGGGGGTTTG
ATGATACTTGACATAACATTTTGCGTAGTCGCTTCATCAAAACAATGTAA
TATCACTGGAAGATGGTGCTGAATTTGTACAAGTTTTGATAACTTGTTTT
GTAGCATAAGTTTCGGTCTTTTTGAGTCAAAACCATCATTTTCAAACGGG
TATTTTCAAAAAATCTTAAGAATCTGTTGAAAATTACTTTTCTTCTCATA
GAAATTTATCACGATTACGTCAGTCGGGACGGCACTGATGACGTCATTTG
TATCATTAGCGGCTTACGCGATTACGCATCGCTTCACGTTTTGGTAAGAT
TCTTGTCGTCACTTAAATCGAATGGATCAAATGCTGCTTATTTGGTTCTT
TCGCCAGGTTTTACTATTTCGATTCTAGTTTAAATACTAGATTCTTCTAT
CGGAATCCTTGTTCTTTCTCGTCCAAGATAAATATATTTAATAATCCTCC
CTTATTTTTAGGGCGGTGCAATTTTCAGGGATGGCAGGAGTTCTTGGTGG
ACTTACTGTAGCATTCAAACAATTAAGACCTGATCAAAGATTTAATATGA
AGTATAAAGAACTACGTGTTCATGTAAGTAGTTTTGCTTTGAGTCAGTTT
TATTTTCGGTCATTTTCTCATAATATGTTTCCGTTGAAAATATTGCTCTC
CTATCTAGCTCCTTTCTATAAAGATTAATTTAAAAATCTACCTACTCGTG
TAAGTATTCAGCAAGCACCCCTACCTTGTCAATTCGATTTCTGGACATAG
TTCAAGAATTCCTTTGCTTTCTGTCAGAAATCTGTTTAAATAACATGTTC
TAATTTGTTATATCCGACCATGACATGGCATGAACCCCCCCCCAGCCCGC
AGGGGGGGGGGCTACAACCAAAATCTTCCTGAAAAAGGCTGGGGGCTGGA
TTTTTTTTCAATTTCAGGGGGTACCTATGATCTCTGGGGGTATCTAACTT
ATATACAGTAAGGTCTGGGGGCTTGGGAACTATATTTTATCTTGCTTTTA
TCTAACTATCATTATTCTTTTTAATTGTAAAAATATACAATTTTTTTCAT
TTCTTGACATTCAAGTCACAGGGGGTACCAATCACAGGGGGTACCTACTA
ACATCTGTTCTTTGGGGTACCTAAAATTCAGGGGGTACCTATTTTCTTAG
GGGGTACCTAAACCCCTGGTCCATGCCATGCATGAATGTTATAATCGAAT
GTTAATCGAATTAATGTTTTTGGTGCATTTTCTTTTTTTATTTCAGGATT
TACCAATATCATGCATAATAATATTCACATTATTGGCAATCTTTCGATTG
CTACCCTACACACAACCGATCATGATGGCGTGTGGCGTTATCGTAGGGTG
GACTTACCTGCGTTTCTATCAATCTCATGGTAAAGGGATGAGGGGGGATA
TGAGCGAAGGTTTTTCAGCTGCCACGCTACTACCAACTCCTATCAGGTGA
TTTTTTAGACTATTTGCTTGAGATAATTTTAAGGTTATTGTACACAAGCA
TTGTTAGAAACGTTTCCCTGACTCTGGCTAAAGGTTAGTTAATTTTCTCT
TCAACAGTAAGTCAGAGGCGACCCGAAAGCTTCTTTTTCGATAGCTATTT
ACCAGAAGGTAGGAGAGGGTGACACTCTTTCTCTACTTGGGGTTTTTCTT
AAATAATAACCTTAAATGATACATTTTCCTTTTATTTTAGGCCAGCAGCG
AGTGTTCTTTCAGATATTTTATATCGAATCCTGGTCAGGTTTGGTTTGTG
TCAAAATCCAGTACGCACGTACGATGTCGGCGGCCCGTCGTCAATCACCA
TCAGCCTGCCGGGCTCCGATCCTGCCGACGCTGAACGAAGAAGGTACATT
CTTGTTTCTGCACATAAAAACTTATAACAATTAAAGCTCTGTTCTGCCAT
TGGTTGACGGAGAAGCATAAAAGTGTTTGAGATGTTTTATTTAAGTTCAT
CCGAACCCGTAATATCATTGGTCTTGAAGGAATCAATAATTTAACATTTC
TAAAATTGGGTAATTTTGACTTCCTCAACGTTTCGAGGATTCTAATGTTT
TTTTGTTTTTTTTTTCGAACATGGCAAAATGATTTTGAAGCAATTTGACC
GCAATTTATAATATTGTTTTCCATCTCTTTACAGGAAAAAAGCTTTACGT
GCATTGAACGAACGTTTAACACAAATGCAACAAAAATCTTCACAACAAGA
GATGGAAACAATCGACGGGTGGCCTTTATTAGAAAACGAAAGCACGCCCT
CTTCGACGCCTTCAGCCTCTGTTTCAGAAACGAACAATAAAGAATCACAC
GAGAATGAGGCTGATTCAGATTCAGACAAAAACAGTCAAGAGAGCTTTGT
GAAAGTACCGAAAGGAACGGATAGTGATTCAATATCAGATTAA Coding sequence (CDS) from alignment at sc0000453_pilon:125171..128713- >XLOC_013303 ID=XLOC_013303|Name=XLOC_013303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000453_pilon:125171..128713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGTTGCAATTCATTTTTTGGTTCAATCATTTATCAGTTCATCTGT
TGTGGTGAAATCAGCATGCGGAGTTATTGTGACGGCTTATCTGATTGGAT
TGATCCCTAATGCTTACGGTGTACTGTCTATCACTCCGGCACTATGCAAG
TTGCAATTCATTTTTTGGTTCAATCATTTATCAGTTCATCTGTTGTGGTG
AAATCAGCATGCGGAGTTATTGTGACGGCTTATCTGATTGGATTGATCCC
TAATGCTTACGGTGTACTGTCTATCACTCCGGCACTATTACTACCACCAA
ATTTTCAAGTGTGGACACTTGTTACTGGTCTCGTCGTAGAGAGAAGTATC
ATAAATATTACTACCACCAAATTTTCAAGTGTGGACACTTGTTACTGGTC
TCGTCGTAGAGAGAAGTATCATAAATGTACTGATTAATTTACCCGCTATC
ATTTTATGTGGACAACATTTGGAACCGTTATGGGGTGCCTTAGAACTTTT
AGTACTGATTAATTTACCCGCTATCATTTTATGTGGACAACATTTGGAAC
CGTTATGGGGTGCCTTAGAACTTTTAAAATTTATCACGATTACGTCAGTC
GGGACGGCACTGATGACGTCATTTGTATCATTAGCGGCTTACGCGATTAC
GCATCGCTTCACGTTTTGAAATTTATCACGATTACGTCAGTCGGGACGGC
ACTGATGACGTCATTTGTATCATTAGCGGCTTACGCGATTACGCATCGCT
TCACGTTTTGGGCGGTGCAATTTTCAGGGATGGCAGGAGTTCTTGGTGGA
CTTACTGTAGCATTCAAACAATTAAGACCTGATCAAAGATTTAATATGAA
GTATAAAGAACTACGTGTTCATGGCGGTGCAATTTTCAGGGATGGCAGGA
GTTCTTGGTGGACTTACTGTAGCATTCAAACAATTAAGACCTGATCAAAG
ATTTAATATGAAGTATAAAGAACTACGTGTTCATGATTTACCAATATCAT
GCATAATAATATTCACATTATTGGCAATCTTTCGATTGCTACCCTACACA
CAACCGATCATGATGGCGTGTGGCGTTATCGTAGGGTGGACTTACCTGCG
TTTCTATCAATCTCATGGTAAAGGGATGAGGGGGGATATGAGCGAAGGTT
TTTCAGCTGCCACGCTACTACCAACTCCTATCAGGATTTACCAATATCAT
GCATAATAATATTCACATTATTGGCAATCTTTCGATTGCTACCCTACACA
CAACCGATCATGATGGCGTGTGGCGTTATCGTAGGGTGGACTTACCTGCG
TTTCTATCAATCTCATGGTAAAGGGATGAGGGGGGATATGAGCGAAGGTT
TTTCAGCTGCCACGCTACTACCAACTCCTATCAGGCCAGCAGCGAGTGTT
CTTTCAGATATTTTATATCGAATCCTGGTCAGGTTTGGTTTGTGTCAAAA
TCCAGTACGCACGTACGATGTCGGCGGCCCGTCGTCAATCACCATCAGCC
TGCCGGGCTCCGATCCTGCCGACGCTGAACGAAGAAGGCCAGCAGCGAGT
GTTCTTTCAGATATTTTATATCGAATCCTGGTCAGGTTTGGTTTGTGTCA
AAATCCAGTACGCACGTACGATGTCGGCGGCCCGTCGTCAATCACCATCA
GCCTGCCGGGCTCCGATCCTGCCGACGCTGAACGAAGAAGGAAAAAAGCT
TTACGTGCATTGAACGAACGTTTAACACAAATGCAACAAAAATCTTCACA
ACAAGAGATGGAAACAATCGACGGGTGGCCTTTATTAGAAAACGAAAGCA
CGCCCTCTTCGACGCCTTCAGCCTCTGTTTCAGAAACGAACAATAAAGAA
TCACACGAGAATGAGGCTGATTCAGATTCAGACAAAAACAGTCAAGAGAG
CTTTGTGAAAGTACCGAAAGGAACGGATAGTGATTCAATATCAGATTAAG
AAAAAAGCTTTACGTGCATTGAACGAACGTTTAACACAAATGCAACAAAA
ATCTTCACAACAAGAGATGGAAACAATCGACGGGTGGCCTTTATTAGAAA
ACGAAAGCACGCCCTCTTCGACGCCTTCAGCCTCTGTTTCAGAAACGAAC
AATAAAGAATCACACGAGAATGAGGCTGATTCAGATTCAGACAAAAACAG
TCAAGAGAGCTTTGTGAAAGTACCGAAAGGAACGGATAGTGATTCAATAT
CAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000453_pilon | genome | sc0000453_pilon:125171..128713 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 847-1104:259 |
| Aaloc | 694-843:703 |
| Aaloc | 493-690:1148 |
| Aaloc | 382-492:1932 |
| Aaloc | 289-378:2193 |
| Aaloc | 214-288:2507 |
| Aaloc | 145-213:2890 |
| Aaloc | 1-141:3544 |
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