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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:250387..256103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012948 ID=XLOC_012948|Name=XLOC_012948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5717bp|location=Sequence derived from alignment at sc0000066_pilon:250387..256103- (Clytia hemisphaerica_ch_hm2_pilon) ATGGTTGCTCAAACTCTCTTGAATTTGAGTGATAAGAAAGATGAAAATAG
TGAACCAAGAATGACACCAAAAGTGTTGAAACAAATTTGCAAAACATTGA
AATTATATCAAACGCCATATTTGAATGATGTCTTGTATTTACATTACAAA
GGATTTTCAAAGATTGAAAGCCTGGATGAATACACTGGTTTGAAATGTTT
ATGGTTAGAATGTAATGGTATAACAGCTATCGAGAATATAGCACATTTAA
AAGAATTGAGATGTTTATATCTTCAACAAAATCTGATCAGCAAGCTTGGT
AATCTTGAAGAGTTGTCTAATCTTGACACTTTGAATGTTAGTAATAATTG
TATCAACCTGATCGAAAATATATCTTGTCTTGGAAAATTGAATACGTTAC
AGATCAGTCATAATCGTTTGGAGTCGTTTGAAGATGTTGAACATTTATCG
GAATGTCAAAGTATTGGTGTGCTTGACTTATCCAATAATCGTTTAAAAGA
TCCAAAAATCACAGAGATTTTCTCACTGATGAGTAACCTCCATGTTTTAA
ATCTAATGGGAAATCCTGTCGCCAAGGAGATCAAAAATTACCGTAAAAAT
GTCATTCTGAGCTGTAAAAATCTAACTTATCTGGATGATCGACCTGTCTT
CCCTCAAGAGCGTGCATGTACAGAGGCTTGGGCACGAGGTGGTCGGGAAG
CTGAGTTAGCTGAGAAGGAATTTTGGGTAAATAAAGAACGTAGAAAAATT
CAAGAGAGTGTTGATTATTTACGTTCAATCCGTGAAAACGCAAGACGAAA
CATGCTACACAGTGAAAGTAAAGATGAGGGCATTGAGATTCTGGATATCA
GCCAAGAAACGGAGGTTTCTGAGTCAGAGGAAGCTGAGGTATTATTTTAT
ACTTTTATTTTTTTTGTGATCTTTTAGTTCCTCAATCGACCAAGTACAAC
GCACGGAGCTCTTTAATTTCAGGTAGATTTTCGTCTCAGTAAGGTCCAAT
TAGGAGGTATTTCTGTCACAAATTTAACAAAAATTCGATAAAATTTGAAG
AATCTTGCCTTATTTGTTGTATAAGTCCATTTCCATCTGAAATAAAAAGT
TTTGCTTGATGGACCAATGCGAATAGTACTACCTTTGTTTTGGTGAATTG
TAAGGGACTTTTTGAATTAATAAGGGTAATGGGTAATGGCTTTATACAAC
CTTTGTTAGATATCTATAAACAATCCCGGGTAGTACCTATTGAAATCGTG
TTTTTGAATTTGTAATGTAAAAGTTTTTACTTAACATTTATAATTCCATT
CTGCTCTGTATAGTTCTTTTTCATTGTTGTAATTGCTGTCATATGATAAA
ATGTGTTCTAACCAGACTACGATGAACGGCTTGAAGCATTTTTTGTTTAC
ATAGAAGGGTTTGAAAGTTACGATCAGACTAACAAGAGATATTTTGAAGA
AACTTTAAATCTTCTCCTCTATCGTTTAGACGGCCGATTTTCGCCCTGCC
TTTTCTAATTGTGGATTAAAGCCAATACGTTCCCCTCTTTTGACGTCAAT
GCAATGACTTCTTTCAATAAAGATTTTCCCGACTTTTGCCTACTTTTTAC
CTACTCTAACAATTAGAATATGTAGGGTGGAAAGTCGGACGTCTAAACTA
GAGCTCAGGTTCCATTTCTGTTGAACCGAGTGCATTTCACTTCGTAAGAC
TTTGCATTAGCATGATCGATTGTTGAATATTAATCTGATATTTTGACCAA
ATTCTAAACTTTCTCCTCTGTCAGCTGTTCCTCCATTTCTGTTGAAATGG
ATGCATTTCACTTCGTACAATTTTGTAATTGTCAACCTTTTTTAAGACAT
AGTTAACTATTTTCGATTCCCTACGGGTAGTTTAAGCATGATAAATTATT
GAATGTTTATCTGATAATTATATTGTTTTTTGAATAATGTATAGGTTAAT
GACGAACCAACATTACCAGACCTTGAGGATCTGTCAGATAGTGATGAAGA
TGACAAAGATGACATCATAAGTGCCACAAACAATACAACCTCTGCCAATG
CTGGTGAAAATCGAAGTGATATTTTCATCACATCTCCATCAACATTATCC
AGTGTTCAACAAAGACCTCTGACAGCTGATCCTATAATGCAAGCATATCC
AAAACAAATGAAACAAAATATTACACCTGCGGCTGTTTCCAATGATAATG
ATAATACTTTAGGTGAGGTGATTTTCGCGGGAAGAAACTTTTTTCCATGC
TTTGAATTTCAAAACCTATTTTCACATTTAGCAAGAAATCTTTCTTTTTA
AAATAACTCTACAAGATTTTTAAGATCTAGTTGACCTTTCTGTATGATAC
GTAGGCCAATTCCTAGAAATTTCAACCACGATTGGAGACCTATGCTCGAT
TGATTGGTCTCTATGGGTGCTATCAAATGCATGGGTCGCGGCGCTTCTAA
GTTCTTAACGATTGTATCAAGTTAAAAATGAGCGTGACATAACCTTTCCA
CTGGAATGGCCAACAAAGTGATCTCCCTTCTTGTCTATTTTCCCGATTGT
CAAGTTTTCCATGATTGATAATAAGCTCTTACTTACTTACCTTTTAGATT
CTGTTACCAGCCAACAGAAGTCCATGGATGAAACAACAACCGACTTTTTC
ACCAATCTTAACAAACTGGCCACTTTGTCACATCACCAAGTTTCTTCTTC
ACATAATGAACCAAAGACCGATTCAAATCAGGAGATTCCGTTCATCACCA
GATCTGACACCAAACCAACCAACAATATGTCTTCAAGTGTTTTTTCAAGT
AAGTATTGAGTGAAGTTCGGTAAATTCCTCAACATCAAAGAGTTCACAAA
GGTTTGTTGAATAAATGAAAAAGAACGTTTTTCTTAAACCTAGTTAACCA
AAGTCTTTTATCTGATTTTCTAGAGATTTAGAACTATAAAAGCACTGCTC
GGTGTGGCTACTTTTGTGTTACAACGAATATAAATTTATGAATATAAGTT
TCAATTTAATAACCCTTATATACACCCCTTTCTCACAGACCCGGTAGGAT
TTTTTCAGCCGATGGGGATAAAACTAACGGACTGAAACTCGATGGGGATT
GGTATTCCAATATTTTTTATGCCTGGCGATTTAAATTTTTCGTTTTCAAA
TCAGAAAATTCGGTGGGGATGGGAAAAATAGCATAATGTTTATTTTCAGT
GGGGACAAAAGTTGGAGGATTATTTTCGACAAGGGACGATTTTTGAACAT
CTTTTTCAGTGGGTCTGTGGGAAGGGGTGTCATCATCAAGCAGTTACTAC
ATTTTTGTGATAAAGATTTCGGATTCGTCTAGATCTTTAGATGTGATCAG
TAGGCCGTACCCATTGGGTCATTTCTTTAAATTCACATACGTATGGAGGG
TTGACGAACATTTTCAAGCCAAAAACACTTCTTTGAAATGTGTGGATACC
CCCAGGAAAATGGTAAAATTTTCAAAAAATCCCTTGGAAAATTTCTTTTC
ATACCTTAAAGTGACGTGACCTTAAAGTCTTTTACCCTCTGGAAATTCTA
AAATAATTTTTTACCCCTTGGAATTCTGCTTGAATTTCCCTTTGGAAATG
TTCGTCCACTCCAATGTATGGATATAAAATGGAATGACCCTTTGATTTTT
CTTTTGCCATAGGTGTTGAAAGAACTCTTGAACCAAACATATCATCAGAT
TTACTCTTCATTTCAAACGATGAAGGAGATCAAGAAAAGAACACTCCTCT
TGATAATGATGAGGATATCGAGACAATCGAATTGACCAATGAAACGAAAC
CATCACTAATAATCGAGGTAAGCTTGACTTGTTACTAGTATGTGGACCTT
AATTTCGTACCAAATACCATTTGACCATATTTTGATTTTACTGATGGACC
TAATGCGGACCTTTTTGGGAGCGCTACCAAAATCATAAAAACGTGAGCTA
AAAGACTGGATACGAGTTTCTTTGGTATGTCTATTCTATTATTGAGGTAA
AGGTATTCAATAGAGCTCAAAAAACTTTAAGTTTGAGAGAAGAGCAAATA
AAAACAGAAAATAAAGCGACTGCCAGTCAGGAATATGTTGTTCAAATTAG
CCGATCATCAGTTGTTTACAAAGATGGATTGGTTATTTAGACGATAGCTT
ATCGGTTGAATAACTGCTGATTGATTGCTTACATTTAGGTTCCAAATAAA
GGGGAAAATCTTTGAGATTTTAATAAACAGGGGGACCTAATTGCCGGGGG
GGTTGGAAATTGTACTTCTGAAAGCCCAAAAATAAGGTAAATATAGGCTG
AAATCAGGCTATTTAGAGCAAAATAAGGAGCCTTCTGTTTGACAGCTGAA
AATATTCTTAAAAATTAACAAGCGGGGGGGGGGTTATTTGAAACCTAAGA
GTACATAAAATACGCTGAATTTAAAACTTTGAAAAGGGGGTTTAGATTTT
GATAGAGTGTCATCCTATAAAAAAACATGATATAAAACAGGGGGGGGTCA
AGCAGTTAGTACAAGACATCATGCCTACTAAGTGATTCTTTGGAGGAAAG
AGGCCACACCACCACCCTTTGACAGTTAGTATGAAATATACTAAGTGATT
TCAAAGGAAATTCACTAAGGACCACCCCTTAAAACCTATCAAACGAGTGT
GATATTTACTTTTTGTCAAACCATGTTCCCAAAATTGTTTTGAAACAGTT
ATTGATTTGGTATGATGAATTAAAATGAATCAAAAATTTTATTTTAACAC
AACGCTGTACAGCGATATATGTACAAGAGTTTCAAATAACGAAGTACTTC
TCAATTGATACAATAATGAAACACCGTAAACCAAAAACATAAACATAATA
TGTAGCGTTCAATCAAGGCAGAAAAAAACTTTTCTTAAGTACAGGGAATT
ACCCTACGAACATTAGGGGAAAATCAACTGACTTTTTTCTTTTATTTATC
AATCTATAGTTAGGGAATTCCCCTGATATAGTGTTTAACTAAAGGGTAAT
ACCAAACAAACTCCAAAGGGGAAGACTTAAATGTCTTAGGTTCTTTGATT
TCTCTTATGGAGGGGGATTTCCCTGATTGCTTTTAGTATTTATTTTTAAT
ATTTTTCTAGAAAAGGTAAAAAAGTAGCACTTAGTATTCATTTGTACTAA
CTGTTTTCCTAGATTTTTTACTTGACACCACCCTAGCAGTCACTTAGTAC
CATCAAGTACTAACTGATTTTTGAAAATTTTGTAGGTATACCACCACGGT
ACTAACCGGCATGATGTCTTGTACTAACTGCTTGACCCCCCCCCCTGTAT
AAAATGGATGATTATATAGCTCGAAAAATTGTGCATTTGGAAGTTAAATT
GGGGATTTTAGATTTTGGTAAAAGAATAGCCATTCTCGATTTTTTCAATT
TTTTTTAATCAGCTCGCAAGACCGTTATTTTAGTATACGATTCAACCTTG
GGAGGAACCAAGGTTCCATGGGTTAAAAACAGTCTATTTGAAAAGGTTGA
ACATACTTCTTGTATTCCACTTAAGGTTTTATCATTTTCCGTGTTTTAGG
AGATCGTTACAAAGAAGAAAGAGGATGGTGGTTTCTTTATCAAAGAAGCG
AACGATGCCACTCGAAAGATGAACGAGGAAAGTGAATTGACAGCACCGTC
GTCGCAACAAAAGAAGAAATTATTAATCCAAGAAATTGATGGTGTCGATG
AAGATGAAGTTGATTGA Coding sequence (CDS) from alignment at sc0000066_pilon:250387..256103- >XLOC_012948 ID=XLOC_012948|Name=XLOC_012948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3360bp|location=Sequence derived from alignment at sc0000066_pilon:250387..256103- (Clytia hemisphaerica_ch_hm2_pilon) ATGGTTGCTCAAACTCTCTTGAATTTGAGTGATAAGAAAGATGAAAATAG TGAACCAAGAATGACACCAAAAGTGTTGAAACAAATTTGCAAAACATTGA AATTATATCAAACGCCATATTTGAATGATGTCTTGTATTTACATTACAAA GGATTTTCAAAGATTGAAAGCCTGGATGAATACACTGGTTTGAAATGTTT ATGGTTAGAATGTAATGGTATAACAGCTATCGAGAATATAGCACATTTAA AAGAATTGAGATGTTTATATCTTCAACAAAATCTGATCAGCAAGCTTGGT AATCTTGAAGAGTTGTCTAATCTTGACACTTTGAATGTTAGTAATAATTG TATCAACCTGATCGAAAATATATCTTGTCTTGGAAAATTGAATACGTTAC AGATCAGTCATAATCGTTTGGAGTCGTTTGAAGATGTTGAACATTTATCG GAATGTCAAAGTATTGGTGTGCTTGACTTATCCAATAATCGTTTAAAAGA TCCAAAAATCACAGAGATTTTCTCACTGATGAGTAACCTCCATGTTTTAA ATCTAATGGGAAATCCTGTCGCCAAGGAGATCAAAAATTACCGTAAAAAT GTCATTCTGAGCTGTAAAAATCTAACTTATCTGGATGATCGACCTGTCTT CCCTCAAGAGCGTGCATGTACAGAGGCTTGGGCACGAGGTGGTCGGGAAG CTGAGTTAGCTGAGAAGGAATTTTGGGTAAATAAAGAACGTAGAAAAATT CAAGAGAGTGTTGATTATTTACGTTCAATCCGTGAAAACGCAAGACGAAA CATGCTACACAGTGAAAGTAAAGATGAGGGCATTGAGATTCTGGATATCA GCCAAGAAACGGAGGTTTCTGAGTCAGAGGAAGCTGAGATGGTTGCTCAA ACTCTCTTGAATTTGAGTGATAAGAAAGATGAAAATAGTGAACCAAGAAT GACACCAAAAGTGTTGAAACAAATTTGCAAAACATTGAAATTATATCAAA CGCCATATTTGAATGATGTCTTGTATTTACATTACAAAGGATTTTCAAAG ATTGAAAGCCTGGATGAATACACTGGTTTGAAATGTTTATGGTTAGAATG TAATGGTATAACAGCTATCGAGAATATAGCACATTTAAAAGAATTGAGAT GTTTATATCTTCAACAAAATCTGATCAGCAAGCTTGGTAATCTTGAAGAG TTGTCTAATCTTGACACTTTGAATGTTAGTAATAATTGTATCAACCTGAT CGAAAATATATCTTGTCTTGGAAAATTGAATACGTTACAGATCAGTCATA ATCGTTTGGAGTCGTTTGAAGATGTTGAACATTTATCGGAATGTCAAAGT ATTGGTGTGCTTGACTTATCCAATAATCGTTTAAAAGATCCAAAAATCAC AGAGATTTTCTCACTGATGAGTAACCTCCATGTTTTAAATCTAATGGGAA ATCCTGTCGCCAAGGAGATCAAAAATTACCGTAAAAATGTCATTCTGAGC TGTAAAAATCTAACTTATCTGGATGATCGACCTGTCTTCCCTCAAGAGCG TGCATGTACAGAGGCTTGGGCACGAGGTGGTCGGGAAGCTGAGTTAGCTG AGAAGGAATTTTGGGTAAATAAAGAACGTAGAAAAATTCAAGAGAGTGTT GATTATTTACGTTCAATCCGTGAAAACGCAAGACGAAACATGCTACACAG TGAAAGTAAAGATGAGGGCATTGAGATTCTGGATATCAGCCAAGAAACGG AGGTTTCTGAGTCAGAGGAAGCTGAGGTTAATGACGAACCAACATTACCA GACCTTGAGGATCTGTCAGATAGTGATGAAGATGACAAAGATGACATCAT AAGTGCCACAAACAATACAACCTCTGCCAATGCTGGTGAAAATCGAAGTG ATATTTTCATCACATCTCCATCAACATTATCCAGTGTTCAACAAAGACCT CTGACAGCTGATCCTATAATGCAAGCATATCCAAAACAAATGAAACAAAA TATTACACCTGCGGCTGTTTCCAATGATAATGATAATACTTTAGGTTAAT GACGAACCAACATTACCAGACCTTGAGGATCTGTCAGATAGTGATGAAGA TGACAAAGATGACATCATAAGTGCCACAAACAATACAACCTCTGCCAATG CTGGTGAAAATCGAAGTGATATTTTCATCACATCTCCATCAACATTATCC AGTGTTCAACAAAGACCTCTGACAGCTGATCCTATAATGCAAGCATATCC AAAACAAATGAAACAAAATATTACACCTGCGGCTGTTTCCAATGATAATG ATAATACTTTAGATTCTGTTACCAGCCAACAGAAGTCCATGGATGAAACA ACAACCGACTTTTTCACCAATCTTAACAAACTGGCCACTTTGTCACATCA CCAAGTTTCTTCTTCACATAATGAACCAAAGACCGATTCAAATCAGGAGA TTCCGTTCATCACCAGATCTGACACCAAACCAACCAACAATATGTCTTCA AGTGTTTTTTCAAATTCTGTTACCAGCCAACAGAAGTCCATGGATGAAAC AACAACCGACTTTTTCACCAATCTTAACAAACTGGCCACTTTGTCACATC ACCAAGTTTCTTCTTCACATAATGAACCAAAGACCGATTCAAATCAGGAG ATTCCGTTCATCACCAGATCTGACACCAAACCAACCAACAATATGTCTTC AAGTGTTTTTTCAAGTGTTGAAAGAACTCTTGAACCAAACATATCATCAG ATTTACTCTTCATTTCAAACGATGAAGGAGATCAAGAAAAGAACACTCCT CTTGATAATGATGAGGATATCGAGACAATCGAATTGACCAATGAAACGAA ACCATCACTAATAATCGAGGTGTTGAAAGAACTCTTGAACCAAACATATC ATCAGATTTACTCTTCATTTCAAACGATGAAGGAGATCAAGAAAAGAACA CTCCTCTTGATAATGATGAGGATATCGAGACAATCGAATTGACCAATGAA ACGAAACCATCACTAATAATCGAGGAGATCGTTACAAAGAAGAAAGAGGA TGGTGGTTTCTTTATCAAAGAAGCGAACGATGCCACTCGAAAGATGAACG AGGAAAGTGAATTGACAGCACCGTCGTCGCAACAAAAGAAGAAATTATTA ATCCAAGAAATTGATGGTGTCGATGAAGATGAAGTTGATTGAGAGATCGT TACAAAGAAGAAAGAGGATGGTGGTTTCTTTATCAAAGAAGCGAACGATG CCACTCGAAAGATGAACGAGGAAAGTGAATTGACAGCACCGTCGTCGCAA CAAAAGAAGAAATTATTAATCCAAGAAATTGATGGTGTCGATGAAGATGA AGTTGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000066_pilon | genome | sc0000066_pilon:250387..256103 - |
Properties
| Property Name | Value |
| Aaloc | 1513-1680:169 |
| Aaloc | 1360-1512:2054 |
| Aaloc | 1159-1356:3119 |
| Aaloc | 889-1155:3774 |
| Aaloc | 1-888:5718 |
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