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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:194389..196884+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012906 ID=XLOC_012906|Name=XLOC_012906|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2496bp|location=Sequence derived from alignment at sc0000083_pilon:194389..196884+ (Clytia hemisphaerica_ch_hm2_pilon)
ACtgaacttttttcttcatccAGTCACTGTTACGATTACAATCCAGCCAT
TCAACCACGTTGCAATGTTGTGTTGGGAGTGATCAGTAAAGAAAGCAAAG
AAGATGATATCAACAGGGCACTTGATGTTTTGACTAAGGTAAAAATAATA
TGGTGACCTAGTGGTTTTTTGGTAAAGGTGTATCTATCTTAAGGAGTGAT
CAGATGGTTTGAGGTATTTGACATGTAGATTCCTTTTATTGTCCTCAGCA
GGACCTTAAGATATTTTTGCCTGATTACTTCCCAAAGTTGAAACAttcaa
gtttttgactttttagtaAAGAAAACAATACAATTTCACCTATGCTATTT
CTAGCATTCGAATAACTAGTTTATAACTAATTTAACGTTACATTACTTCG
ATGCAAGGGAATATTACCTTTTTACAAGAGCTCTCATACACTATTTTGTT
TTCGATAGCGTcgtcgaaaaaatatatatttatatttttcgtTACCACTG
TCCTTAAAAGCTGACCGCGCCAGTAAGGGCTGATAAGTTTATTGAATTTT
AGTTGATTTGGTAATCAAATAACCAAACACATATATCCAATAATGGATTT
TGATTTTCTAGGCGACTGGTGTTTATCAAGATTTCAATTTAGCGGAAGCC
ACGCTGATGTGCTTGGCCAAATATCAAGCTCTCCTTAAAAAGGTAAGTTG
TGTAAGCCTAGGactgaaaaaaaacataccacagACCTGGTTGTACCCTC
TCCACGCACAAAAGATTTGCCCAAAAGTTCCTGGTGGGAGAAATACTCTG
AAATTGCATCCCAATTAGAAGCCCTAAGTAGATTTTTTGGCTGTACACAA
TAGAATTCGAAATCCCCACTCCTAGCAAGAAGGGATTCAGTTTATCATCA
CCACTAGCCAGAAATTCTCAATTGATCACTGAGACAGTGATGTCAGTACA
GATCAGTGTGTTTTATCAAAACCAGCAATCATTAAAGTACTCTCGggata
cctaatagccgggggggttggaataagcGgggggggcttggaaaaaatct
caaaacttaataagcggggggggaaggggtttggaataaaaatgtcctgg
gtggaaaattttcgaaaaattaattagtggggggacggctattaggtacc
caagagtacaTGTATCAGATGTTTTAACTTCCTCTGTTTGTTTTTTAGGA
TTCGAGTTTCCacaaaatattgttttgggtTGCAGTCAGTGTTCTACAGG
TTTGGACTCTCACGCTTCCTTTAACTTATTGGACGTCCCTTTACAACTTT
TTAAAGAACCAATGAATTTTTGTTCGGGCTCGGTTGCTCTTATTTTTCTG
CTACTTTGAGCCTCCAATTATCCTTAACCTAATACTTGAGACTTTATATC
CAATTTTCAATTATTATAATTCAGCCATTCAAGACTTGTTCtaaaattat
tcttaaattgtCCTAATTTATTCATATATTTGAATCCTTCTTATAACATT
GTTCCTATAAAATAGAGCATACTGTATGTTGATCTAATGACGAAGTTCCT
TATCTTTTTTCGTCAATCCTCTTCAGAGAAATGATGATAGCGATTTCTTC
ACGGTCAGAATCGCATACCTCGTTACTATcggaaaatcaatgaaataatg
ttttcttttcttttgtttccagTTTGGTGAACAAAGTCTTTACCCAGCAG
CGCTTTGTCTACTTGAACAAAATCTGTATGTCTCCCAAGAAAACAATTTG
TACACTGTCAATGTAAGTCCAATTTGTCAACATTTAGCCTACCAGCATCC
gttctctgttttgttttgtttagaaaGAATGTGAATTGGCCAAACAAATC
ACGTCCGATTGGCCATTTTTGGCTGAGGAAGTTTTTTGAGCTGAGAAGGG
ACCGTCCATATAGAACGTACGCAGTGAAGTTGGGAGGGAGGTTTAGCAAA
AAGCGTACGTCTATTGTTTGAATGACGTGAGCAAGAAATAAGTATATAGA
TTTGACAAGATATTGTGGCTTCACCGATAAAGTAATACACGGGTTAAGAT
CTCTGTTTTGATTCAGTGTAATCTATAAACGAACTCTCTTCTGATTAAAT
ACTTAAGAGGCGTGGttttttttttAGCAAATCTTAGATTGTTTACTTGG
TTCCTTCAAAATTATACGGAAACTTTTCGAAATTCGTGAATTCGTGTTTT
ATCTTGGAAGACCCGCCCTTATACAATGTTGAAAAGCTCTTTCGTTTCAC
ACGGATATCCGTCTCAACGAAGTATACAAAGAGGTAtacaaaattaaaca
acaatctCACCGGAACATATGCTAATTTGCTTGCTttgaatagtgcttat
aatttGAATTAATTACTTTGTTTCACTTTCTGTAGACTTTACAATCATCT
CTCTTGGAATATCGAAATGACATCGCATACCATTGGATTTTTAAACAACT
TGATCATATTTGTGGATTGAGCTTCTCTTCCTCCTTCGATTTCGCG Coding sequence (CDS) from alignment at sc0000083_pilon:194389..196884+ >XLOC_012906 ID=XLOC_012906|Name=XLOC_012906|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000083_pilon:194389..196884+ (Clytia hemisphaerica_ch_hm2_pilon)
ACtgaacttttttcttcatccAGTCACTGTTACGATTACAATCCAGCCAT
TCAACCACGTTGCAATGTTGTGTTGGGAGTGATCAGTAAAGAAAGCAAAG
AAGATGATATCAACAGGGCACTTGATGTTTTGACTAAGACtgaacttttt
tcttcatccAGTCACTGTTACGATTACAATCCAGCCATTCAACCACGTTG
CAATGTTGTGTTGGGAGTGATCAGTAAAGAAAGCAAAGAAGATGATATCA
ACAGGGCACTTGATGTTTTGACTAAGGCGACTGGTGTTTATCAAGATTTC
AATTTAGCGGAAGCCACGCTGATGTGCTTGGCCAAATATCAAGCTCTCCT
TAAAAAGGCGACTGGTGTTTATCAAGATTTCAATTTAGCGGAAGCCACGC
TGATGTGCTTGGCCAAATATCAAGCTCTCCTTAAAAAGGATTCGAGTTTC
CacaaaatattgttttgggtTGCAGTCAGTGTTCTACAGGATTCGAGTTT
CCacaaaatattgttttgggtTGCAGTCAGTGTTCTACAGTTTGGTGAAC
AAAGTCTTTACCCAGCAGCGCTTTGTCTACTTGAACAAAATCTGTATGTC
TCCCAAGAAAACAATTTGTACACTGTCAATTTTGGTGAACAAAGTCTTTA
CCCAGCAGCGCTTTGTCTACTTGAACAAAATCTGTATGTCTCCCAAGAAA
ACAATTTGTACACTGTCAATACTTTACAATCATCTCTCTTGGAATATCGA
AATGACATCGCATACCATTGGATTTTTAAACAACTTGATCATATTTGTGG
ATTGAGCTTCTCTTCCTCCTTCGATTTCGCGACTTTACAATCATCTCTCT
TGGAATATCGAAATGACATCGCATACCATTGGATTTTTAAACAACTTGAT
CATATTTGTGGATTGAGCTTCTCTTCCTCCTTCGATTTCGCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:194389..196884 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 361-471:2386 |
| Aaloc | 271-360:1673 |
| Aaloc | 220-270:1199 |
| Aaloc | 139-219:612 |
| Aaloc | 1-138:1 |
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