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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:198265..202559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012905 ID=XLOC_012905|Name=XLOC_012905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4295bp|location=Sequence derived from alignment at sc0000083_pilon:198265..202559+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTTACGTCATCCATCTGCGAAAACGAAGTCGTCGGCTATCAGGATATT
GCATTACCTACTGACCATATGTTCCAAAGCTCAAGGGTATGCTTTgctct
tttttatttcatcttGTCCACtcgcccggggtccacttaaggCCTTTGAA
GATTCTAGTTGTTTTTGGATGGTGAAAGTAGGGtaaagaaattctttaat
tgaaaataaggaattgAAATCTTTTATTCATGTAGGTTTCACTCTCATAA
TTATGGTATAGTTTTGttgtctttttcaaaatggcgaccttgtCAAGTGC
TCGTTGTCTACTTCACttgactcagcgtcatcaaaaattatcaaaaagca
aagttcagccagaagtagactcttgTTTGATTTTTGTGCACTGACATTCA
TGATATGACATCCAAAGGGACCACCACACCTACTCTAAATAAGGGCGCTT
GAAATAGCTTAATTTTTGGTCCAGCTTAGAACATTTCGTTACAGTGCATT
ATCATTTTTCTGTCGCTGTCCGTGGTGCTGTATGTCCGTTGTTGAAAAAG
AAGCGCTTTGTCAAtacaagttcattttggaaaaaacgGCGCCTCGCAAA
AATTACTGCACTTCGAAAACTTTGATTTCTGGTACGAAGTGTACGCATTG
CGAACAAACATTCGACTATTGCTATGTCGCTGGACCATCATACGCCGCTT
CGGTTTCTTGTTGTGTCTTGGAACATCGATAGgaaatgtaaaaattgttt
cCATTAACCTTAACTAGCTTGTGCTTTTCTAATTGAcccttccagaaaat
gtccgtacatggggggcggaggatatagtgtccggggggtagtgaaaatc
tacaaaatttgccttgtccgggctTGGCTTGCCTTTTCACTTGCTCTATA
TTTGtcttgctctgtttgagggtaattttgaatggcTAGGGGGTCAACCG
ATGCTTGTCCAGGGTGGTACACCTACTGTCCGGGGGATCAAATGTCACAA
TTTCCAAGGGGTCAATTTCcagaaaatgttatatcctccaccaaTTTTCA
TATCTTGACTTTCAATGTTTTCTTAATCCATGCTTTTGCTTTCTCTCTCT
CTAACAGGAccaaagaaaagtttgaagtGAACAAACACACTGTACCATAC
TTAGCAGGTCAGTATGAGTCATctattattgattgattgattgattgatt
gattgattgattgattgattgattgatttgatttttgattgatttataga
ttttttgattgatttatagattttttgattgattgatttgatttttgatt
gatttatagattttttgattgattgatttgatttttgattgattgattga
tttttgattgattgattgattgattgattgatttgtcGATATATTTTATT
GTCTAAAAGTAAAGCAAATGAACATAAAGAGATGAGGGATGAAATTAAGA
TGAATATTACGAAGCAAATTTATTTCCCTTTTCTCTCCAGTACTAATGTC
AGTCAGTGACGAAGTCTTATCCAAACTCAACAACGAAAGACCAGTCTACA
CCCCAAGCAACTTCAAAACGCTCAAACGTCTGAAATCCAAGAAAACGATA
GACGTTTCTAGGAGAGATAGCGCACCATCCGTTGTCATAACGACTAGCTC
ACAAGTCGATTCGGATAGCGCGCAAAAGCAACAAAAGCGACAGATCGATT
TCGATACAGGGACATACAATTGTTTGCTGAACCCCCGGATATTGGATACA
GAGAATTATCAAGTCCTCTTGGTCGTTATAttggtaagttttttatttgt
tttacaaACTATGCTGAGATCATGGTTTTTTCGTCAATATTGTATAGACC
CTCCTGGATTTTTGGGAAAGTTTTAAGGCACtttattagatttttattta
aatGTCAGAGATCTTCTCTGGATCTTGACCCTTGATTTTCCGAGTTTTAg
attcttgaaaaaaacaaaaacagcgAGTCAAGATTAATTCGAAGATCTAC
CCACTATAACTTAAAACTTTTAGCTAAACGTCATTTAATTAACGGtatga
gatattttgcctgcagattCCTTTCATGGTATTGAGTAaaagtttcaaat
cattttcaccTCACTCGAGATAttcaagttacaagtttttaacttttagc
aagaaaaaaatagaattatgACGAAGAACCCAAACTCAAATTGTCATATC
TCGATTTTATATTTGACTtgggaaaatatattttgaggttttccCGATGA
CCAAAGAAAGATACAGGCAAAAGATATGAACCCATCTGATTTATCCCTCT
GAGTCCTTTAAAGTGGGGTCTGCCGAGGGTAcaaaataccggaataccgg
gaatttgttcttaaaatatgGCGTATCGGCCAAAAATTTCTCGGAAGCCT
CTTTAAGCTAAAATTGTATAAATAGAATTATCTGTTGAAGAAAATGCTTG
TCGTTATTTTCAACTTCAGTCTACCATGTTGGATCATTCGATGGACGACT
TTGAAGGAAGAATTATTTTGGAAGTTTTGGCTGAAGCTTCATCACTTTAT
ACAGATATCTTCCCTGTAACGTAAGTTTAAGAAAAAATGCGATGATACTA
AAGATTTTGTATACTTAACTgacacacaatgttgtttcaacgtttatcta
atgttatataatgtccatataacgttagatgaacgttgaaacaacgttgc
gcCCCGTACCTTCTAGAAGAGTTTATTATGTTTGTAGTATTTTTTCCCCT
TAGAGGTCACTCTCATATCGATGTTTACTAATGGACGATAGACTAAACGT
TattttgacgttagtcgtgggaaaaGTCATTATGTGAGTGGCCTCTTAGT
GTAGCTGTTTGTTCTTTATATGAGAAAATCATGGTTTTATTTCGTTCGTT
TCAACAGGTTTTCAATACTGCATCGTAAGCTGTGCAACGTTCTTACGCAT
TCAGAAGATCAGGAAACCCTAACAGCAGCTCAAAAGATTGTACAATCAAC
ATCACACAATAATATGGACAAACCTTATCTTAAACTCCAACATTTAACTT
GTAAGTTTAAGGACACGATTCTCCGAttatttgcttacacagcactTTTC
GtcggcaaaaataaaattgtcgACAGAAAAAGTTATTGGTCGAAAATAAG
TCGTCGGTAAAAAGGGTTGTCACCAGGCgatattttcttcacttttcccC
GATGAACCCTCACTGGCGTTAtttttttGTCGTTGGCATAAAAATTGTAA
GGGATCAGAAATAAATTAGGGCTAggctaaaagcaaaattgaACTTTGGC
ATCTGCAATAAGGGCTGGAGTTAAGGTACGCTTacagtacagttgacgct
cctTAATTCGAAATTCTGTTATTAGATAGGCTCCATATTCGATAGTATTA
AAAGTCACCGTCAatgagaaactctcataaaggaGGCTCTACTAGATCCG
ATacgctcctttattcgatgaaaatccaatcccccttgaaaatcgaatta
gagagcgtcaactgtatttgttTTCTTCTGAAGCATATACCGTTTGAGCA
TTTGATTTCCTCATCTGGATCGAAGGGTCGTTTTGATCTTCTTATCAATC
TCTTTTCTAATTGGATACTAAAGAAATTTATCCTTGGTTTGAATgatttc
tatatttttagaTTCTGTTGGTTTTAAAAAGTGCATcactattttatttt
tacattttccagCATTGGGTTTTCATGGTTTACACTCTTTCACTGGACCT
TTCGTCGAGGTAAGCTTTTATTTTGGAACTCGCTATTCCTAAAACATTTT
CCGCTCCACGGCTTGATTATCTCtattgaaacaaaacatttcttcatttt
attcttttttcattaatcagatcaacaataaaaagaactattttttgaca
ttttattgatttttattgtGCATCAATATCATCCTAAACTAAACCATTAT
TattcttgtattttacagagATCTGATCCCCAAACAGCACCCCAAATGTT
TGCTCGTTTCTTATCGACTGTTTTGGATCAATCCGCTCCTGTCGCCCTCT
CCTCAGAAGGGCGTTCATCATCAGgacaaatctttaaagcgccttCATCG
GTAGATGATGTAGCCATCTGCACGTCGAGTAGCTCAAACTCATTAAACGC
CATATCGGCGACTACTGATACGGGTGCAAGTAGTGGCTCAGGACTTTTTT
CCGCCTTTAAGCGGGTGGGCTCGTACTCGCCCGCCCGACGACAGaaaaaa
aTAGACGGAAGCCTGTCAGCCAGAAGCAAAGACGGGAAACATTGA Coding sequence (CDS) from alignment at sc0000083_pilon:198265..202559+ >XLOC_012905 ID=XLOC_012905|Name=XLOC_012905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0000083_pilon:198265..202559+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTTACGTCATCCATCTGCGAAAACGAAGTCGTCGGCTATCAGGATATT
GCATTACCTACTGACCATATGTTCCAAAGCTCAAGGGGTTTACGTCATCC
ATCTGCGAAAACGAAGTCGTCGGCTATCAGGATATTGCATTACCTACTGA
CCATATGTTCCAAAGCTCAAGGGAccaaagaaaagtttgaagtGAACAAA
CACACTGTACCATACTTAGCAGGAccaaagaaaagtttgaagtGAACAAA
CACACTGTACCATACTTAGCAGTACTAATGTCAGTCAGTGACGAAGTCTT
ATCCAAACTCAACAACGAAAGACCAGTCTACACCCCAAGCAACTTCAAAA
CGCTCAAACGTCTGAAATCCAAGAAAACGATAGACGTTTCTAGGAGAGAT
AGCGCACCATCCGTTGTCATAACGACTAGCTCACAAGTCGATTCGGATAG
CGCGCAAAAGCAACAAAAGCGACAGATCGATTTCGATACAGGGACATACA
ATTGTTTGCTGAACCCCCGGATATTGGATACAGAGAATTATCAAGTCCTC
TTGGTCGTTATAttgTACTAATGTCAGTCAGTGACGAAGTCTTATCCAAA
CTCAACAACGAAAGACCAGTCTACACCCCAAGCAACTTCAAAACGCTCAA
ACGTCTGAAATCCAAGAAAACGATAGACGTTTCTAGGAGAGATAGCGCAC
CATCCGTTGTCATAACGACTAGCTCACAAGTCGATTCGGATAGCGCGCAA
AAGCAACAAAAGCGACAGATCGATTTCGATACAGGGACATACAATTGTTT
GCTGAACCCCCGGATATTGGATACAGAGAATTATCAAGTCCTCTTGGTCG
TTATAttgTCTACCATGTTGGATCATTCGATGGACGACTTTGAAGGAAGA
ATTATTTTGGAAGTTTTGGCTGAAGCTTCATCACTTTATACAGATATCTT
CCCTGTAACTCTACCATGTTGGATCATTCGATGGACGACTTTGAAGGAAG
AATTATTTTGGAAGTTTTGGCTGAAGCTTCATCACTTTATACAGATATCT
TCCCTGTAACGTTTTCAATACTGCATCGTAAGCTGTGCAACGTTCTTACG
CATTCAGAAGATCAGGAAACCCTAACAGCAGCTCAAAAGATTGTACAATC
AACATCACACAATAATATGGACAAACCTTATCTTAAACTCCAACATTTAA
CTTGTTTTCAATACTGCATCGTAAGCTGTGCAACGTTCTTACGCATTCAG
AAGATCAGGAAACCCTAACAGCAGCTCAAAAGATTGTACAATCAACATCA
CACAATAATATGGACAAACCTTATCTTAAACTCCAACATTTAACTTCATT
GGGTTTTCATGGTTTACACTCTTTCACTGGACCTTTCGTCGAGCATTGGG
TTTTCATGGTTTACACTCTTTCACTGGACCTTTCGTCGAGagATCTGATC
CCCAAACAGCACCCCAAATGTTTGCTCGTTTCTTATCGACTGTTTTGGAT
CAATCCGCTCCTGTCGCCCTCTCCTCAGAAGGGCGTTCATCATCAGgaca
aatctttaaagcgccttCATCGGTAGATGATGTAGCCATCTGCACGTCGA
GTAGCTCAAACTCATTAAACGCCATATCGGCGACTACTGATACGGGTGCA
AGTAGTGGCTCAGGACTTTTTTCCGCCTTTAAGCGGGTGGGCTCGTACTC
GCCCGCCCGACGACAGaaaaaaaTAGACGGAAGCCTGTCAGCCAGAAGCA
AAGACGGGAAACATTGAagATCTGATCCCCAAACAGCACCCCAAATGTTT
GCTCGTTTCTTATCGACTGTTTTGGATCAATCCGCTCCTGTCGCCCTCTC
CTCAGAAGGGCGTTCATCATCAGgacaaatctttaaagcgccttCATCGG
TAGATGATGTAGCCATCTGCACGTCGAGTAGCTCAAACTCATTAAACGCC
ATATCGGCGACTACTGATACGGGTGCAAGTAGTGGCTCAGGACTTTTTTC
CGCCTTTAAGCGGGTGGGCTCGTACTCGCCCGCCCGACGACAGaaaaaaa
TAGACGGAAGCCTGTCAGCCAGAAGCAAAGACGGGAAACATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:198265..202559 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 721-1047:3969 |
| Aaloc | 676-720:3715 |
| Aaloc | 532-672:2909 |
| Aaloc | 430-528:2470 |
| Aaloc | 139-429:1493 |
| Aaloc | 88-135:1109 |
| Aaloc | 1-84:1 |
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