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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:949547..953435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012829 ID=XLOC_012829|Name=XLOC_012829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3889bp|location=Sequence derived from alignment at sc0000049_pilon:949547..953435+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTATCTCGTGTTTTAATTATGTTATCTTGTGTCGTGGCGTCCAC
TTTGCTAATTGCGGCAACCGCTGGCGTCGCTTGGGGTCGCAATGAAAATA
ATGGCGCGTTAATTGGtttgtggaaattttgtgatcgTGCTATTTGTCac
aaattcaaagaaatgaCGGTTGAAGGTATGAggaattttcatcgatttcC
AAAGAAAGTAGCACCCCTGTCTGACTGTAATATTTACCGAGAAAAATTAG
CTATACCCTTATTTCATTTAAACAATGGGCTATTCTATTAAAAAGCCATA
catggggtggacgaaccttttcaagtcaaaaaagaatttgtgaaaatttg
tggataccccctggagaatggcaaaatttgaaaaaatacccaaaattatt
ttcatatctAAAAGTTAGGGTGGACGAGctaaaaatcagtcttttacccc
ctggaaatttttctcgaattaccctctggaaatggtcgtccacccccccc
ccatgtatagatataaaatggaatgacccaatTGCCAAGAAAaattaaca
cccctgtctcactgaaacGTTCAAGAAAATttagcacccctgtctcactg
aaacGTTCAAGAAAATttagcacccctgtctcactgaaacGTTCAAGAAA
ATttagcacccctgtctcactgaaacGTTCAAGAAAATTTAGCACCTCTG
TCTCACTTAAATGTTTACCAAGAAAATTTAGAACCCCTGTCTCATTAAAC
CTGCACTTGATACTTGATAATTGCCCGTTGTATGCTTGCAGAAGGATCAA
GGGTGAGTGTAGAAAgacctaccttcgggtagatagctatccaAAGAGGA
GCTTTCCGACTCGCAAAACTTTACTTATTATTGTTCACAGGTTGGTGGTA
TGCGATTCGAGTGAACATGGTGTTGTCTTTATTGAGTGCATTTAGTGGAT
TCATTCTCTCCTTTGCAATGGTATTGAATAACTCTTTGAGCACCATTTGG
TTGGCCCTCATCTACTTCATCTCAGGTAAGACAAATCCTCAGAACAAAAC
CACACTCTTTTGAAGGGCTACAGCGAACGCTCTCACTGGTATTCAGCCTA
TCAGTGAAACAGGTTATGCAAATTGCTTTTGTGTACGACGTTGTGAAAAT
GATTTGCTGCAGTGCCGTTGAGAGTATTTTAATATTCACTCCCTCGAACA
GATGTAAAATAGAATGGAAAATCAGTAATTTATGACTGaagttaaaaaaa
catttctataaatattattttctgGCGGGCGCAAAGTCGCCCCTTGCTAC
GGCAATATGATGTTTTGGCAATCTTGATTACCAATGGTTTTTCATCTGAT
CTTTTTTCAGGTCATTTTCCAGCGTACATTTAACTTTACATTTGTTTTGC
TTCTGTCGTCTAATTGGGAAATCTGTCGTGACCGTGCCTCTCAATGAACT
TTCTgataatattcttcaaaatgaataatgctttttagaaaccaccctag
tatactcaaaataaaagaaaaggtatcaaacaatgaaaactcCTTCAAGT
TTAGAAACACCACCGAAGACGAAGTAGAGAAAATAATTAGTAACCTTAAG
ACAAATAAGTCTCAAGCGGAAAATGATATACcagcgaaaataattaaaaa
atactctcACTTATTTGCAAGCTGCttctttataagcataaacGACTCCT
TCAGCTCAGGCTTTTTTCCCAACATTTCCAAGTTCGCGACAGTCACCCCA
GTCtacaagaaaaattctaaaaacgataaaagtaaCTATAGACCAATAAG
TATGCTGCCGgtaatatccaaaatttacgaaagagtATATCACAATCAAA
TATCAGAATACTTTGAGCACTACTTTGATGAACAACAATGTGGTTTCAGG
AAAGGATATTCCACTCAAACCTCTCTTCTCCCAATGGAAGAGCTCTGGAA
GCTAGCCAATGATAAAAAAGATGTTTTCGGGGCACTGCTCATCGACCTTT
CTAAGGCCTTTGACTGCATGTGCCACAAATTACTTGTAGCAAAGATCAGT
GCATACGGGTTCGATGACCTTTCCACTGGGTTAGTCAAGAGTTATCTAGA
AAATAGGCAACAAAGGACAAAAAAGTAGGCAACGAACTGAGTAACTGGAT
CAAGATCAAGGATGGTGTTCCCCAGGGATCAATCCTTGGCCctctgtttt
tcaatatttatatctgtgacctctttttcatcattgaggaTACTAAGGTT
GCGAATTATGCGGACGATACGACACCCTATGTTAGTGCTCCTACCTGGAT
TGAGTAAGTGGTAAAACTAAGCTTTGtagcagaaaaaatcttcacatggc
tttcgattaatcaaatggttgtaatgctgacaaatgtcagctaatagtta
acatcattgacgactcgctctatctaaatattagagaagaaactgttttc
aataccaaaacgtcaaagattcttggagtaaccttcgataatcttttggc
gtttgaatcgcatatagaaaatctttgcaagaaagctagtttgaaaataa
ccgccttagccagaatgagcacatatctcactttagaaaaaaagaaacga
ttgatgaatgctttcattaaatgccacttcaattactgtcctctcatatg
gatgtttcatagcagagctctagaggataaaataaacaatctacataaga
tgcttgagaatcgtttactcagacTACAACTCATCATTCGATGATCTGTT
GAAACTTGACAACGGTTCCACCTTTCATCAACGAGCAATTCAATCCTTat
ccacagagctatttaaatcaaaactcaatgaatcagaaagtaaaatattt
ctcaaaaaccaatgtaagatcaaaacgagaaaaaggaattcctttcgtag
tagagtagttgaaagtgaaatgaatggaaaatcgtctttagctttcctgg
gacctaaaatctgggctacccttcccgatgactataaaaaacttaaaaac
ctagatgaatttaaaaaagaaatcaagcaatggAGGCCCACTACTACTAC
GTCCTTGCCGAAACTGTCGCACTTTTATCCATGGCGTTGGtttcattgat
tgaatttaaattaatttgtaaataatagttgatcttgagtatcaaccttc
tagatagatttgtaattaatagttgatattgattagcctcgagctaagta
cacattgtactactttgcatcaactttaaagaaaacaaacataaacataa
acataaaccgTAGTGACGGAGACGTAAGGTCTGTaataggcttcagaagg
cctgACAAGGGAacttcagtcaccgcgtttggcctGGAAGGGTAAAcgcg
cggtgaaagcatagcaaaaatgagtgattatgaggtgttctaaggcctgc
aATAGTCTTCTTATTATGAAGAGACCATTTACAAGAATAACTTACATTTG
CACTGTCCTGTCGTTTTTCTGCTAACTGCAAgagacgagatggagttttt
acaagcttttatttgatttggctGGTCGTTAACcattaataaaacaattt
tgttaccttttctaaagaacgtgtcATTTTTACTACTTCAACTGaacaat
tattaaagtatcacATAAAAACTCCATCCCATCTGAACTGGAAGGGTAGG
ccatgaaaaattcttttccctTTCCAGGTGTTCTGTCAGCATCCAGCCTC
ATCGTGTGGGGAATCAAAATCACACCACCCTATCGTCTCTCGTACAGTTA
TGTTCTTGGTTTGATCGCGTTTGTGTTAGAATTACTTGtcattgtttgtt
gttttttggaaGAAGTTCAAAAGAGGAGAAATCGAAGAAGTTCATCATCA
GATGGTTCCAATAGCGATCTGCAGAATTTACAAATTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:949547..953435+ >XLOC_012829 ID=XLOC_012829|Name=XLOC_012829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000049_pilon:949547..953435+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTATCTCGTGTTTTAATTATGTTATCTTGTGTCGTGGCGTCCAC
TTTGCTAATTGCGGCAACCGCTGGCGTCGCTTGGGGTCGCAATGAAAATA
ATGGCGCGTTAATTGGtttgtggaaattttgtgatcgTGCTATTTGTCac
aaattcaaagaaatgaCGGTTGAAGATGAAGTTATCTCGTGTTTTAATTA
TGTTATCTTGTGTCGTGGCGTCCACTTTGCTAATTGCGGCAACCGCTGGC
GTCGCTTGGGGTCGCAATGAAAATAATGGCGCGTTAATTGGtttgtggaa
attttgtgatcgTGCTATTTGTCacaaattcaaagaaatgaCGGTTGAAG
GTTGGTGGTATGCGATTCGAGTGAACATGGTGTTGTCTTTATTGAGTGCA
TTTAGTGGATTCATTCTCTCCTTTGCAATGGTATTGAATAACTCTTTGAG
CACCATTTGGTTGGCCCTCATCTACTTCATCTCAGGTTGGTGGTATGCGA
TTCGAGTGAACATGGTGTTGTCTTTATTGAGTGCATTTAGTGGATTCATT
CTCTCCTTTGCAATGGTATTGAATAACTCTTTGAGCACCATTTGGTTGGC
CCTCATCTACTTCATCTCAGGTGTTCTGTCAGCATCCAGCCTCATCGTGT
GGGGAATCAAAATCACACCACCCTATCGTCTCTCGTACAGTTATGTTCTT
GGTTTGATCGCGTTTGTGTTAGAATTACTTGtcattgtttgttgtttttt
ggaaGAAGTTCAAAAGAGGAGAAATCGAAGAAGTTCATCATCAGATGGTT
CCAATAGCGATCTGCAGAATTTACAAATTTAAGTGTTCTGTCAGCATCCA
GCCTCATCGTGTGGGGAATCAAAATCACACCACCCTATCGTCTCTCGTAC
AGTTATGTTCTTGGTTTGATCGCGTTTGTGTTAGAATTACTTGtcattgt
ttgttgttttttggaaGAAGTTCAAAAGAGGAGAAATCGAAGAAGTTCAT
CATCAGATGGTTCCAATAGCGATCTGCAGAATTTACAAATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:949547..953435 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-522:3680 |
| Aaloc | 178-309:893 |
| Aaloc | 1-174:1 |
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