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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1226857..1229669- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012425 ID=XLOC_012425|Name=XLOC_012425|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2813bp|location=Sequence derived from alignment at sc0000049_pilon:1226857..1229669- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGTTGATGAGAGGCCGACTGAACAATACAGTGACATCGGTGGGCT
AGATACACAAATTCAAGAACTGATCGAAGCTATCGTCCTCCCAATGACGC
ATCAAGAACGATTCGAACGTCTAGGTATTTATTCTGTTTAAAATGTTCTC
ATGGTAATCATACTATTCTTTTATTGTTTGAAAAAAATTGTATAATTTGA
ACGAACACCCTGTTCAATATGAACACCCTGTTCAATACGAACACCCTGTT
CAATATGGACACATCTTCTCAAAGTCTCCTCAGAAAATTTTGAGATCGTA
CCTTATCCGGTATATTGTTGTAGAGATTTATTATTGTCTGGATAGCAACT
TAAAAACCAAAACTTGTGTCCGCATCTGGTTCAAATTGACAAGGGAAATT
TTAGTCAGGGGAAATTATGTACACTTAACATTATGTTCAATGAAAATGTA
TTGTTTAATTTCTGCATCAAATATTTATCTTAGAAAAAAATCTGTCTATG
TTCTGTTCAATTCAGGTGTTGCACCACCCAAAGGTGTTCTTCTGTTTGGC
CCGCCTGGTACCGGAAAAACTCTACTAGCAAGGGCGTGTGCCGCCCAAAC
AAAAGCTACGTTCTTGAAATTGGCTGGTCCACAACTTGTACAAATGTTTA
TCGGAGATGGTGCGAAATTGGTGAGAGATGCATTCGCACTTGCCAAAGAG
AAGCTTCCAGCTATCATCTTTATTGACGAATTGGATGCTATCGGTACAAA
ACGTTTCGACAGCGAGAAAGCTGGCGACCGTGAAGTTCAACGTACTATGT
TGGAGCTGTTGAATCAATTAGATGGGTTCAGCTCTACATCACAAATTAAA
GTAAGATGATTTTTGCGTTTTTTTTTTTATTTATAAGACAGAAAGGGAAA
AGTGTCAATCACCCAAGTTTGGGTAGTTTTGGGTGATAAAATGGTAAAAT
ACGCTGCACCTTTTCGCATTCATTAGTGTTTTAGATATAAGCACTGCGGT
ATATATCCCCCAAACGTAAGGGACCCCCAATAGTAGGTTTTGTTTGATTC
AAATGACAATTGAAACCTGTAGATGAGTCGAAATGGGGCGATTTTTGATT
ACTTTGGTTGGTTAGTATTTCTTCTTTAAGAAAAACATGTTTTTGGTTGT
CTGAAACATTTTGGAAGTAGCCTAATCTTCTATATGAAAAATTGTTCATC
TAAATCTGCCAAAAATTGCATAGAACTCTCTTTAACTCCTTAGACGTCGA
AATTAAGTTATGAAGAAGGAGTATAGGAAGCTTTCTATAATTCCTAAGAA
CATATCCCAAAATCCAGGTGAGAATTTGAATGAGCATTCTCGGGCCCATA
AATTGACATTAAAAAACTAAAAATTCTCAAGATGGGTAGTAGATAAAAGC
TGTGGAATTCTTTTGCTGCCGACATGACATAGTTTGCAACGGAAAATTAC
ATTTATATACAAATTATTTTTTCTGAATCAGCATTTATGGCAAAAATTTT
GAAAAATATTTCAGGTTATCGCAGCAACCAATCGTGTGGACATCTTGGAT
CCAGCTTTACTTCGATCCGGACGTTTAGATAGAAAGATCGAATTCCCCAA
TCCTACGGAGGAAGCACGTGCTCGTATTTTGCAAATCCATTCCAGAAAAA
TGAATTTCAGCTCTAACGTATGTACTTTTGAACTCTGATACACCTTTATC
GACGCGGTCCGCTTTTCAGGGGACTGGTAATGAATTTACAAGGAAATTTT
TTCTCGTTAAAACCTTCTTAATGAGAGAATTTCCCTGAGATTCTGGAGTT
GCAGGACGTGGATTGCTTAGCATTCGAAAAGTTCAATCTAAATGACGGGA
GTATCTGGTTTCTTTAAGCGGGTTCTTACATGGTTCTTACGTCAGAATTT
CATTGTTTTGATATCTTTCTGTTTAAGGGCTTTGACCATAGTCGAAAAAT
TGATTTTAGTATTTGAACATAAAAGTTATGTTTAGGTTCTTTAACACTTT
TAACAAAGAATTGCCTTTACAAATTGCTTTTAAATCAAATCCCTTAAGAG
TAATTAAGAATTTAATTGCAAAAATGACGCTGTGAACTTTAAAAAGACGT
TAATAATATGTTGCATTGCCTTCTTTTATAAAAAAGTGCTAAAAGTTTTA
ATGGGTAATTAACCTTTTTGTTTTGAAGTTTTATTAAACTGTCCGCGAAG
AATTGAACTGTTTCAAATTTTTCGGAAAATTTTTCTAAATTAATGCATCA
GAAGTTATGGCTGTTTTTCTATGAAAAAATATACACCATCTACCGCAAAA
AAAAATTCAAAAAGTTTTTTCTTCGCCGAAAATGCTCTTCATAGTTGAAA
TACTCTTCTTCGCAAAAGTCTTCATTTTCTTCTTCGTCTAATTTTTTCAT
TGCGATTCTTAAATTTTCAGACTCAAGGATAAATTGGCCTAAAAGAAAAT
GTATAACATGCCACAGTTTTGTATGCTACATTAAGTAGAAATTTATATTT
TGTACGTGGCAAATATTAAAAATTCACTATGGTCAGAGCCCTTAATTTAA
CATGAGTATCTAGACTTGACAAACGGTAGAGAATACGTGAATTGATATCC
TTTAACTTAATCTCTTAATCTCTTCAGGTCAATTTCGAAGAGTTGGCGCG
TTGTACGGAAGATTTTAACGGAGCACAACTGAAAGCTGTATGTGTGGAAG
CCGGTATGATTGCGTTGAGAAGGGAAGCTACAGAACTTCAACATGAAGAT
TATATGGACGGTATCATGGAGGTCCAATCCAAAAAGAAAAACAATCTTCA
ATATTACGCTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:1226857..1229669- >XLOC_012425 ID=XLOC_012425|Name=XLOC_012425|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1596bp|location=Sequence derived from alignment at sc0000049_pilon:1226857..1229669- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGTTGATGAGAGGCCGACTGAACAATACAGTGACATCGGTGGGCT
AGATACACAAATTCAAGAACTGATCGAAGCTATCGTCCTCCCAATGACGC
ATCAAGAACGATTCGAACGTCTAGATGGAGGTTGATGAGAGGCCGACTGA
ACAATACAGTGACATCGGTGGGCTAGATACACAAATTCAAGAACTGATCG
AAGCTATCGTCCTCCCAATGACGCATCAAGAACGATTCGAACGTCTAGGT
GTTGCACCACCCAAAGGTGTTCTTCTGTTTGGCCCGCCTGGTACCGGAAA
AACTCTACTAGCAAGGGCGTGTGCCGCCCAAACAAAAGCTACGTTCTTGA
AATTGGCTGGTCCACAACTTGTACAAATGTTTATCGGAGATGGTGCGAAA
TTGGTGAGAGATGCATTCGCACTTGCCAAAGAGAAGCTTCCAGCTATCAT
CTTTATTGACGAATTGGATGCTATCGGTACAAAACGTTTCGACAGCGAGA
AAGCTGGCGACCGTGAAGTTCAACGTACTATGTTGGAGCTGTTGAATCAA
TTAGATGGGTTCAGCTCTACATCACAAATTAAAGTGTTGCACCACCCAAA
GGTGTTCTTCTGTTTGGCCCGCCTGGTACCGGAAAAACTCTACTAGCAAG
GGCGTGTGCCGCCCAAACAAAAGCTACGTTCTTGAAATTGGCTGGTCCAC
AACTTGTACAAATGTTTATCGGAGATGGTGCGAAATTGGTGAGAGATGCA
TTCGCACTTGCCAAAGAGAAGCTTCCAGCTATCATCTTTATTGACGAATT
GGATGCTATCGGTACAAAACGTTTCGACAGCGAGAAAGCTGGCGACCGTG
AAGTTCAACGTACTATGTTGGAGCTGTTGAATCAATTAGATGGGTTCAGC
TCTACATCACAAATTAAAGTTATCGCAGCAACCAATCGTGTGGACATCTT
GGATCCAGCTTTACTTCGATCCGGACGTTTAGATAGAAAGATCGAATTCC
CCAATCCTACGGAGGAAGCACGTGCTCGTATTTTGCAAATCCATTCCAGA
AAAATGAATTTCAGCTCTAACGTTATCGCAGCAACCAATCGTGTGGACAT
CTTGGATCCAGCTTTACTTCGATCCGGACGTTTAGATAGAAAGATCGAAT
TCCCCAATCCTACGGAGGAAGCACGTGCTCGTATTTTGCAAATCCATTCC
AGAAAAATGAATTTCAGCTCTAACGTCAATTTCGAAGAGTTGGCGCGTTG
TACGGAAGATTTTAACGGAGCACAACTGAAAGCTGTATGTGTGGAAGCCG
GTATGATTGCGTTGAGAAGGGAAGCTACAGAACTTCAACATGAAGATTAT
ATGGACGGTATCATGGAGGTCCAATCCAAAAAGAAAAACAATCTTCAATA
TTACGCTTAAGTCAATTTCGAAGAGTTGGCGCGTTGTACGGAAGATTTTA
ACGGAGCACAACTGAAAGCTGTATGTGTGGAAGCCGGTATGATTGCGTTG
AGAAGGGAAGCTACAGAACTTCAACATGAAGATTATATGGACGGTATCAT
GGAGGTCCAATCCAAAAAGAAAAACAATCTTCAATATTACGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1226857..1229669 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 613-798:187 |
| Aaloc | 460-612:1300 |
| Aaloc | 127-459:2297 |
| Aaloc | 1-123:2814 |
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