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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:410949..420415+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012245 ID=XLOC_012245|Name=XLOC_012245|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9467bp|location=Sequence derived from alignment at sc0000098_pilon:410949..420415+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGAATAATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAA
GCTTTTTACTCGACAGGTAAGTCAATTGTTCTACAATGCCTTTTAGACAA
tgtattttgtatttatattgTGCCGCTTTGTCTCCTTATTACTCTTACTA
CAGTCATTGCGGTCATTGTGCGAGTAAGAAAATTATATACCTTATAATAT
ATGACCATTTGTTATAAGGTTTTTGCTGGATGCTATATGTTGTGTGTTAT
GATGCATTGATTACTGATGCAGATTctagaaaaaagaaatgatgcaaaat
ggttgATAACATCTTTGATAACATTCGGCTAATgcttcagatgcatccgg
cCGCGCGGGACGCACGTATATACCGCGTGGAGCGCACGCGTATACCACTC
GACGCGTGTAGCGCGTAGTATAGGGTTAGGGATTTGCACATCCCTAACCC
CTCACCCACCCAGCGGTGCACGTACGTGTGGTGGCTTCTTCGGAGTAATA
TGGCAatcataacagttagcctaactcgtcagtcaGACTTATTTATATAT
AGTACTAAGAACTTccccccaaaatggaccccaaaatggattcccaaatg
gaacccaaaatggattcccaaaaatggaACCGGCTGGTTCGGGCTTGGAG
GTAATTCCCTCTGTTTAGGATagaatgatttaaaaattagaaatacaaaa
aaaaaacgtaaatttaaaccagacggtgtcaatcaaacaccttcgaacaa
aaattgcaatcgcaggctgcatcatttgaaaatttcaggcgtgtggtcaa
tcacactcctacaaccttaattttagtaatttaggcgtgtgataaggagt
gctatgcacaactttcagttgtgaaacttactttatatggggtgtgattg
atcgcactcctcagacattttaggtgtgtgcggaggtgtgcgcgtgctat
cgcacgcctcaaatgatgcagccaTCAATCGAACCACTCGAACGTAATTG
ATCGAATAAATGcgattcgattgttgaacgtAATCGAAATCGAACGGACG
AAATGCTCTGGTTTTTTATTGGtatttaaatgaaaattagtcaaagagtg
ttaattaaaaaggaaagaattttaaaaatttaaacagggtttaaattgaa
aaaggaatttcaaaattcaaaggtaaaatcaaaataaattggcgattttg
gggtaaaattGGAATGCAAAGGGGaaaaaaaGCAGGGGGTaaaggaaacg
ggacccaatgggaaagagaatcgaaaggggaaaatagaaaaaacgggaaa
aggataactcgaatcaaagaaaagtaaggagaaaaaaaaagattcaaaga
aacaggtataaagaaggaaaaaaaagggagcaatgcagtaaaacacgggg
aaaacgggacacaaaaaaacaaacgggaaaccaaaaaagggagcaactca
caaaaaGCAATGGAGGGAAATCCTCAAGCAAAGAACCACAAAAAGAAATG
CATGAAAACGGGTGCTCGTCAAAGGGGGAAGGTcaaaaaaacagaaaggg
ccaaaccaacaggaataaaaaaggatgaaaaggttaaaagaagtcaaggt
cggtcaaggtgcaaagggaggaaaaggtTAACCTAACAACATTGCAGGAA
ATGggggaaaaaacaaaagaaatcaaacataatataaaatttcatcataa
acaaccatttcaaagcaaaaatttaaccatgtgcttttatcgatctttcg
cagtttgcgccgtgtataacgcagaccagaaaatatttgacacATATTAT
ACGTGtaacaggtatattacatattgtaatgttatGATGGTACATATAAT
GAAACAAGGGTTCTAAATAAAACTCAAATCTTCTGATTGGgggtaatttt
atatccagccatattgttataaTCACATTCGGCATTGCTGAATATTTTTG
Gtgcttttctcttgtaagacatgatattttgtaattctgtcaatattttt
gtcaaaaattgtcattaagtcattaaaataacaattgaataattaatttg
tttcatccttctaaaaccactctcttagggacctcacaagcttctgattg
gtgccgttttatatccattcacactatctacATCACATTCTGTATTATAA
AtaTttttcgtgcttttgtcttgttaggcatcataTtttatgattttgtc
attatttttgtaagtaagtgtcactatgtcaaaataggtttttttattca
attgccattttataatatctaaatagcatgtattacttttttgtaattta
atgcgctatgtattgatgttatgttatgttatgtatatgttatgatctta
ttttttttccggtctgtaccttgttgacctgtgacctgcaacctgtgacc
tgcgttttacaCtAACcgaatgtttcacttttttgcacctattcttcaaa
atgaaaatatttaagattgttaaaagttcttcttatcaatgattttttac
ggcactttgttgacaatctaactcttgcatcaaattcccgctttcttcag
caaattgaagatgagaaaaaacctaagccacagatcacggattgaaacaa
atatatgaagggtgggattttacagctgcCCGTTGTGCAAGGCACAAGGG
CCATTTGAAATGTGGCAACCTCATTGgaggaaatttgataaacagctgca
aaggagtGCCGGGAAGCAATTAGTAGAAGAGACcaatttcgtttttgttg
cagatttcgatataaacttaactcagggattacttgtcaatgtgcaTGTG
cacaatgtgttgtgtcaacttgtcagcattgtattgttgtaaagggaaaa
taaaagaggtaagactagcctagtctCTAATCCTGacataggagtttaag
tttagactgtttgagtaaggttagattggttcgattgatagttgactata
ttcgattggttcgattgattgtcaattacattcgattaaTCTTCAATTTC
GTTCTATTATGATtatatgttcgatgagtttgattgcaattaaattaaat
tggatcacttcgtttagagctttttagcgtgaaCGGCCGAGCGCTACATA
ATCAAATAcaatcaaacataatcaaagcaatcgaacagcaaatcctgggt
aatatttgattgcgaTAATCATGGTAGTGAGATAGATTAGTTTAAAGTGC
GGTCCAAATTGGGACAAAAAATGATCGTAAAGCAAAGAACTAAGAATTGT
CTTGTGGTTATAACTCTTGACTGCTTGCTCTAGCGGGCTGAAAATTTACA
CAATCGTCCAGCAAGGCAGGGTGATGTGATATTCCTAAGAAACAGAATTA
AAAGGGTCCTTAAAATGACAATACATTGTCCTGTAACACAAAAAGTATGG
ACAGCATAATGCCTATTATGGGACaaagtaaaataaaagaattggaaaat
ttctgACTTCACActtgatttttctgattttttgctcaatgatgcaaaat
ggtaactAAATCCCAAATGTTGGgtaaatttcttgtttttaatttgttca
aaaactaatatcaaaactaatatcaaaaatgtgaaaagtgaattattttg
aattttttttattgaaatgtcAGACATAGTGTGAACCCCCCTTTTTTAAG
TGGGGAATCCAACTTTTCAAgaaaggctttatagggggatAAGAGATTTT
CCGAGTAAAATGAGGGGTTTGAGTTTTTAGGGGgtattgaataaaaatag
gGGGATAACaactttttggtaaaaatatgtattatatCTTAAATTGGTCA
AAGAATTGGGTATAGTCCAACAAGATAGCAATGTAAATGAGATCatgtat
tttataattttttcgcTGCTAATTTTCAAAGTCAAAATGGTATTGCATCC
TTCATCATTTCATTATAGACCGTGGCCAAGGGCTCACAACATTTCACTTT
TCTCAAAATGTAATAAACTTGTGATATGTTTCTTACTCAAATTGAAGGTT
AAAAAGACTGGGCaagcaataaaagaaaaaagattagtGTGAATATCTGA
CgtaaattaaaatttatgatCCAGACAGTTTGCTGGTCCTATAAGAGGCA
CTTTTCCAGGCATGGGCATTTTGAATAAATGttgtaaaaattcttatttt
agaTTAATGGTTCAttcaaattgaagaagaaatttcataaacaccgtctt
tttgaaaaatgccccAATCGTCTTCAGATTccactgaaaaatatatttga
tgcCAAAACTTTCATGAAAGGGTAAGGTTTTTGTATGTAATTGACCAAGG
CCTAATTGAGAGCAGGCTTTCCTGGACATTTCATTATATTATAATACAGT
ATTTCTAGATTCAAAGTTGAGCCAAAAGTAGATGATATGTATCTGACTAT
TGTTAATCTCGTATTGtcatatgtgactccccaagcgattttaagTGCCT
ATGAAAAGACTGGTCCAGACTGATCGGCCAAAATACAGTAAAAGACCCTT
CCTTCTTTCTTTGTCTTCATTTTGTACTCAATCTATTctgtctttaaaaa
tctttttttttttaacaaaaagacTCCCTGTCCCCTGTTTGTATTTCCCT
TGCAAAAAAGACACCCCCTGACTTAGTTTAGCCTCTTCTTTAATTATTTC
TTCTTCCTGACTAAGCACATACCAGCacatacccctgtctcactttGATC
TCTATGAGCTGATCCAACTTTGATTTCCTTGTAGCgaaaagacacccctg
tctctcttTGACCTCCTTTATATTCTAGATATTCTGTGTCCTTGGAAACT
ATAAGTTACCCCAACCTCAATTTGACCCGCCTGTTTGACCCTCTTCTGTT
TTACAATCTCTGTTCTTTATTTCATATACCGTTTGTTTACGACCttctat
tctcaacttcagttgagttagaatctgagaatgtgtgtctgtctgtgtgt
ctgtctgtgtgtatgtcccaaaactttggggcagcctggagacttcaaaa
attgttcgatttggcttaaatttggcacacttgttccttgggtgaatatc
tgggggtgtttttttcatttttcaaaaattttgatttttggggcctgggg
acgagttttcgccgaaacgaggctaaaactttggggcagcctggagactt
caaaaattgttcgatttggctgaaattttgcacacttgttccttgggtga
atatctgggggtgtttttttcatttttcaaaagttttgatttttggggcc
tggggacgagtttttcgccaaaacaaggctaaaattttggggcagcctgg
agacttcaaaaattgttcgatctggctgaaattttgcacacttgttcctt
gggtgaatatctggtggtgctttttttcattttttgaaaattttgatttt
tggggcctggggacgagtttttcgctaaaacgaggctaaaactttggggc
agtctggagacttcaaaaattgttcgatctggctgaaattttgcacactt
gttccttgggtgaatatctggtggtgctttttgcatttttcaaaaattta
gttttttggggcctagggacgagttttttgctaAAACGAGGGTAAAGCTT
TAgagcagcctacaggcctccaaaatggtcggatttggttgaaatttggc
acacttgttcattgggtaaatatctgggggtctacaattgggcctatgaa
taatttgaagccactgaagttgagcccagtgcgttgcgcacgttcgacta
ttattATAACCGAAACAATAtacaataaaaattaattatcttACCTTTCT
TCTTTATCTTTGATGAAAGTTATAAGTCtttttttCTCATCATAGTAAAT
TAATCTCACTTTGCAGCTAACAAACTGGTTTTCTAAAAGTCCCACTAGAG
TCCCACTGTATAACTGTTAAGTGAAGGGAAAAAGAGTGAAAAAATATGAG
CACTAGATTTGGTTTCTTGAGACATTACAACATATAAGTAGTGGAAAACC
TGAATTTCGGCTCTGGGATTTAAAGGGGTTATCCCattggaagaaagtgg
aagagTTAAATTTCTTTGGACTTATCTTTTCAGGCATATTGCTATTGGAT
TCACTGAGGATGGAAGATATTTGTTGACTTATGTTTCTAACATTAAGTTT
CAATTATCAGACACTTCTGTTTGCTCTTATCAATATGTCCtgcattggtg
gaaatttgatctTTGGAATAAACTACAAAAGGTAAGGACTTCATTGATAT
TTATTCGTAgaatcatttttggacctacctcgaaGGTCCTTTAAATTGAC
CTGTGTCCTTCCGTCCGTCCATCTGATGcattttctcaggattggctctt
tcgaattttctgatttttttcacaatgatgcaaaatgataatgccCAAAA
TCTGAGAGAGCcagatttcaaaaacaaaattctgactgaaatgtgccgga
aaaactgtttttggtgttttctcaagatttcattatCAGTTTTCCAAAAC
ATGGTCGAgtccaaatttttgagaaaagctTTTTCCTGCCAGAAATACTT
TAGGCGtgcaaactttcgcgagcagaaactttcaatTCAGCATTGCGGAC
GAAGTAAAactcagaataaaaacatactggtttaaaatatttcgctctct
cttagagcatcttcagtttttttgaataacaaagacgtttaacaattata
tttaacgacgctagaacggcattacaatgacttcttcagTTTTTGACGTC
ACGGAACATCTGGTACACTTCTTTCGCGTATCCGTGGCAGTCTTTGTTGA
GACCTGATGGAGCCAGAGTTTGGAGTCTGCACATCCATTTATCTTCGGCT
CGTTCTCTTTCTGCGGAGGATGAAAAGTCACTTTCTAGGATCATCACCTC
AAGGTCAGCAAAGGAGTGGTCGCGATGGAAATGTTCTGCCAACTCTGAAT
TTTTCGGTCTCTTTCCAATGTCGTAGCGGTGCTTTGAAAAACGCGTTGAC
AAGGCTTCTCCTGTGTGACCAACGTACAACTTGTCATGGATCTTGCATCT
GGCTGCATACACAACGTTCTTCGTTTTGCAGCTACCACCATTGGTTACAC
GTTTAGTGATACCATCTTCGTCTGCACATGGCATCCAGCTCTCAGACACC
TATCATCACTTCTTCGTCAAAACTTCAACATGGTCAAAAACGACATCACC
TTATCCACCGTCTTCCCTTCAACTCCAACAGTCGCCTTCCGCCGCCGAAA
AACAATCGCCAACAAAATCGTGCGAAATGATATCTTGGAAAGACCACCAC
GTCAAAACACCACGAAACCGTGTGGTAAATGCAAGCTATGCCCGAACATT
GTCACCCAGTCAGAAATCACTCACAATGGTATCACTAAACGTGTAACCAA
TGGTGGTAGCTGCAAAACGAAGAACGTTGTGTATGCAGCCAGATGCAAGA
TCCATGACAAGTTGTACGTTGGTCACACAGGAGAAGCCTTGTCAACGCGT
TTTTCAAAGCACCGCTACGACATTGGAAAGAGACCGAAAAATTCAGAGTT
GGCAGAACATTTCCATCGCGACCACTCCTTCGCTGACCTTGAGGTGATGA
TCCTAGAAAGTGACTTTTCATCCTCCGCAGAAAGAGAACGAGCCGAAGAT
AAATGGATGTGCAGACTCCAAACTCTGGCTCCATCAGGTCTCAACAAAGA
CTGCCACGGATACGCGAAAGAAGTGTACCAGATGTTCCGTGACGTCAAAA
Actgaagaagtcattgtaatgccgttctagcgtcgttaaatataattgtt
aaacgtctttgttattcaaaaaaactgaagatgctctaagagagagcgaa
atattttaaaccagtatgtttttattctgagcagaaactttcgcgaggac
gaaaaatcgcgaaattcacgacatttactttcgcgaatttaacggaaaaa
catttttcgcaagcataaactttcgcgaatcaggacgtaaaattgagaat
tttcacatgaaaaatggCTTACAGGgtcaaatacttcttggattggcttg
aaacattatttgtcctttgactttttagtcttttagcaggctaaaaagtg
ccataaaagtaagttacattttattcaaagttttacagattttctatttt
gtcaagaatttttcgcgaggataaactttcgcgaatggcccttattagaa
tttttaaagacatttactttcgcgaaaagggccagaatgcgcaaaaatcg
cgaaagtttctgctagCGAAAGTTTGTACTTCCTTTTCTATTTCCATTCT
TTAtttatcattaggtaggtccaatatgCATTACCAGATtgtgcttgttt
ttttttgaagtattctctttttctttttggacctaccccggtggggtaga
ggtcctataaattaatcaatgtccgttcgttcgtccgttcgttcgtccgt
ctgttaccagcttttctcaggattggctcattagtttttctgatttttca
ttttaaaccttcactttcgaatcaacttttctttctatttGATAATATTC
TAATTCAACtcttgaatatattttcaacatgCACCAAACCACTGTCtaat
tcaatcaaaagttacaccTTccccccccccTACAGATTATTCGGAGAGAG
Attttaagacaaatttttgcagtttttaaagtcttttgctcctgcttttt
gtttCAGGTATATGAAGTTGAATTATTTGCAAAGGAAACAATTTCAAACG
TCAGGATTCTGCGACTGATTATATTGTGGTTCATGCATCTCTTGTCAAGT
AACGACTCCTTTTCTCCGACAGACTTTGCAATTAAAAACCATAGATCAAC
GATTATAGTTGTTATAAAGTTTCTGTATTACTCCAGGCTATTTCTCTAAC
TAAACACTTAATTTTTTACATATCGTAAACGCCCCGGgtgttcattaaat
tttttggatttttggggtgtttaaaagaagggggcgtttatttgataAGT
TATGAACAAGGTCACTTTAGTAACGTGTATTGGAACCTCATTTTTCCTTT
CTATTATTATTTGAATATAAATATGTCAATTTAGGGATGTAGAAATGGGT
CAAAACCAGGTCGAATACAAAAAGAGTATAATTATTGTTGTATATCTAAG
TTTTCTTCATATTATACTTCCTTACTGCTACCTGTTTCAAATAAATGCCC
CtcctaggggggggggcgtgGCGTTTATTTGAAGGTGAGGGGGCgttcat
tgaaaatttttccttaaAGGAGgtgcgtttattcgagggggcgtttattc
taAGTGAAACGGTATATTATTATCCTTTTTCAGTACGGATTCTCAAAGCA
ATGGAAGAATGTGTTATGTATCAATCGTCCCTAAATATAACAAGAAGAAA
CCTGAACAGAATCAATATAGTGTCCATTTCAAATATGAACTGTTACCACC
TCATCCACCATTTCTGA Coding sequence (CDS) from alignment at sc0000098_pilon:410949..420415+ >XLOC_012245 ID=XLOC_012245|Name=XLOC_012245|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000098_pilon:410949..420415+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAGAATAATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAA
GCTTTTTACTCGACAGATGAGTGAGAATAATAATCGTAAATTAAGCCCCT
ATCCAATTCCAGCAAAGCTTTTTACTCGACAGaTTAATGGTTCAttcaaa
ttgaagaagaaatttcataaacaccgtctttttgaaaaatgccccAATCG
TCTTCAGATTccactgaaaaatatatttgatgcCAAAACTTTCATGAAAG
GaTTAATGGTTCAttcaaattgaagaagaaatttcataaacaccgtcttt
ttgaaaaatgccccAATCGTCTTCAGATTccactgaaaaatatatttgat
gcCAAAACTTTCATGAAAGGGCATATTGCTATTGGATTCACTGAGGATGG
AAGATATTTGTTGACTTATGTTTCTAACATTAAGTTTCAATTATCAGACA
CTTCTGTTTGCTCTTATCAATATGTCCtgcattggtggaaatttgatctT
TGGAATAAACTACAAAAGGCATATTGCTATTGGATTCACTGAGGATGGAA
GATATTTGTTGACTTATGTTTCTAACATTAAGTTTCAATTATCAGACACT
TCTGTTTGCTCTTATCAATATGTCCtgcattggtggaaatttgatctTTG
GAATAAACTACAAAAGGTATATGAAGTTGAATTATTTGCAAAGGAAACAA
TTTCAAACGTCAGGATTCTGCGACTGATTATATTGTGGTTCATGCATCTC
TTGTCAAGTATATGAAGTTGAATTATTTGCAAAGGAAACAATTTCAAACG
TCAGGATTCTGCGACTGATTATATTGTGGTTCATGCATCTCTTGTCAATA
CGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATCAATCGTCCCTAAA
TATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCATTTCAAATA
TGAACTGTTACCACCTCATCCACCATTTCTGATACGGATTCTCAAAGCAA
TGGAAGAATGTGTTATGTATCAATCGTCCCTAAATATAACAAGAAGAAAC
CTGAACAGAATCAATATAGTGTCCATTTCAAATATGAACTGTTACCACCT
CATCCACCATTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:410949..420415 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 427-558:9336 |
| Aaloc | 334-423:8708 |
| Aaloc | 187-333:6085 |
| Aaloc | 67-183:4153 |
| Aaloc | 1-66:1 |
|
