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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:935639..943104+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012210 ID=XLOC_012210|Name=XLOC_012210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7466bp|location=Sequence derived from alignment at sc0000058_pilon:935639..943104+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCAAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAA
CACAACTTTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTG
GTGGAGGAGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTG
CTTGCTCCAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTC
CAGTATTAAGACACCAAGGAATCACagtaaaaacagtttttccaaTGAGA
GGGTTGCATTGGTTACAGGAGGAAAAAGGTAGCAATTTCAtgaatttcat
tcttttttgttAGATTTATGAAGCCCTAGAGAGATGttgtgctttaagct
cttccaagcaaaaaaaagtgaatagcgcaaaaaatattgttgctattgtt
ttcgaaaacctgtgaagcttcttattggtcaagcgctgaaattctattgt
actgtaatgtcacgtgacttaggtaggatttcctacctaacctcggcaca
cttttcagccaaagcacgccatctagcccttcgggctttacaaatctatg
atgtcgacattagaccaagttacggtatcacaaaaataaactgaaataaa
aCACTAATACTTTATAGCATGTTGCGCTGCTGGAAGATTCGCAGCTTTAT
TGTGTGCTAATTCAGGAGAATgtcaatttgaacaaaattttttttcaaaa
tcgaaaaagtgataataccttaagggaagaaattttagcgaattcGGCGA
ATTGCCTTGGGTataaatttagccaaattttctttccttcAAATTTAAGT
AGGTCTTTCACCAAAATAAGGTGCAAGAccttattttattaatttaattt
atattattattaattaattatttatattaatttaatttaatttcaattta
gtcTCAATTTcttgagtctgctaaatcacgTGCCTCACGTGCCCTAGTGC
CTTAACttttttttACGTGCCTCTAGTGCCTCAAGTGCCCTAGTGCCTCA
CGTGCTctaaatttttcacatttactttttttttttcaagaaaaaaatcc
aaaatccaaaatccaaaatcacgtgaaaattggcaaaaatcacaaaaaaa
tccaaaaaaacaaaaaagtctcgTACAACTTTTCGGGAATGATTTACCCC
TTTTTCATGTGCCCTTAAATTTTCACGTAGCCTATTGTTTTTCACTTGTC
CTCAATTCTCTGGTGTTAACAGGGTTTTGCAAACTGAACGAAATATTAct
tacacctttactttacTTTAAATTGCATTTTAATGCACaaaattctcgag
ttaaaagttaaaagttaaaagtgcgagttgcaaattaaaaatgctagttg
caaatttagtATAAAGTGATATacactttttatataagaacaaatttata
tgatcaattcagaaaaataattatcattatcattatttttcaaagctatg
tgcttttttttttttaaacaacaaaAGGAAATCAGTAAAAAGCTTTCGCC
GCTCAGCGCACGTGGTGGTCAGCGGTTCTTATAGCTGTAAAAATTACAGT
CGAAACAAGGGGTAATCATCTTGTCACAAGCGAGTATAATACTTTTCAAC
AGCATTCGCTGACACTTTTTCTCTCACTTTCTTTCTCTTTACTCGCAGGT
GCCGAATAAACGGGAGGGGgtagggggcgtttattaatttttcgattttt
tttccaacTCCCGGACCTTACACACCGAGATTGTTGTCGTAGCAGCTAGT
TTTCTTTCGGAATTGTTTTCCACAACGCCTCAACGGCGAtataattatac
atttaaatGATTCCAGGTCGTTGAACAGAAATAGTcagaataatttgaaa
aatttaaaaatttgaaacaaagcTTTAACAATATTTTAATTAGCTAATTT
CTGTGTTTAGAAAGGCAACATAAGttaaatgaaaattatccaaagGTTGA
GtttattaattaaaaaattaggGCACTAGGGCACGGGAAATTTTAAGGCA
CTTGAGGCACGTGAGACACTAAAAAAGCTGTCAATTACCGATACCGAGTA
CCTATCGACTTAATCCCGAAATACCGATAAGAAAGACCTCATATCGCTaa
aaaaaTTTAGGGCACGTGAAAATTTTAGGGCACTTGAAAAGTTTAGGGCA
CGTGAGAATTTTAGGGCACGTGAGAATTTTAGGGCACATGAAAATTTTAG
GGCACTAGGGCACGTGAAATTTTAGGGCACTAGGGCACGTGAAATTTTAA
GGCACTAGGGCACTTAAGGCACTAGGGCACTAGAAGCACGTaaaaaaaGT
TAAGGCACTAGGGCACTTGAGGCAcgtgatttagcagactccaaTTTCTC
CCTTAAAGccttttttcttcgattttcagctaaaatattgaaccAAAATG
CGTCGttaattttcgccaaatttagaaattttattaaatcgccaaaataa
attcttccaaattgcaccaaaattggcgagcctattcgccaaaatttctt
ctcttaaggtattgAATTTGCAAAACTGGAGGTAGCATGGGATTCCAAGC
TCacaattttagaagaaaaaaaacgttaCCTCACACAGTTCTAAGATTAT
atagcttggtgcaggtagatcaGTCTGATACAGAATGTTTGAAACAGTCT
GTGTgcgaacccctgttgacagactttctgatcTTTGGAACCCCAGGTAG
ACAcgcataatcaacttaccatcaAAACTCTTCAACAAGctctaaaattt
ttcaaaactactaaaaaccacatcaaaacatcagccacatgtttttaaaa
aactttcagcCAACAGCAATTTtgttagtctacacaatagacagcttcAG
GCTTTTAGGCTTTTAAGCTTTTAAAagctcttggtctataggcactgcta
taggcggccactagtaacccccaccgggaatagcttattgattggtttta
aacataatagacaactttcacaaaagatatgtttatcaatagagatttca
aataaaagaatgtttaaaacacagcttattggcttaggtttcgaaactct
ctattgtttcataaaaacctcagtgcgcatgcgatttattcGGAGAActg
aaatattcaaaacaagagtaGTGCTCATACGAAGACTTTTTAGGACTTAA
TTTGGGTGTCTTTTTATTTAGAATTATCTCTAATCAATCGTACAGGTCTC
TAATTTTACTTTGGTCTATTGGATATTTTGGATGGAAATACTTGTGAGGG
GAATAGTTTATTGTGATAAACCCGGATTTTTCGCTGCGATCACTATGCAA
TGGTCATATACCGACTAATCTATGAGCAGTACCTAATTAATTGGTCAACT
GATAATtcaaatgattttaattttcgataatattgaaaaatcaATCACAA
TCAATCAATTTTATTTAGCTTGTCCTTATGTGATAATGCATTGGAGTCTT
CATAGCTCAACACGTAAgggggggggCACAAATTGTTCGacttatggaaa
tttcgagttatggagattggtttataaggcatttttaactgaagggacca
aaaaattttgttcgatttaacTCGACATGGATGcgtacaaaaaaaattat
tgaaccCCGTTTTGATCAATGAGTAAATGTATACCAAAACTATTTTGATC
AATGAGTAAATGTAAGTTTTATACCAAAACTGTCTTTTTGCATAGGTTTT
GCATAATATGACCACAGCAAATTTGCCGTCATGATTTCTGCTTAATAATC
CAAGATGGTGGAAAGATCTATATGAAAGTCACGAGCCCTGCTATTCATAA
CTTGTGTCGGTCATTCAAATCAGTATTTAAAAGTAGTTCTAACAAATTGT
TGAGTGTATTAAAAGTTATTGGTTTACGTTGTCCTTTCAAATCGGTTTGA
CTTTTTCATCCACTTGTGATGATTTGAATAGTAGTTTTAAGTCCAGTTTC
GGaattttttcgagaaaaatgcATGTTATCATGAATATTAGCGTACGAAA
ATGACTTGTTGCTTGGTAAGACTTAACACATAGCCATTGTAATCgtattt
tgagcttttaaagtaAGAGCAAATAGttcttttcgaatgttttaatgATC
ATTTTATTTCATCATCCCAtttttttCGTTATTCGGTCCTCTTAAACCTC
TTTACTACACTGTCAAACTGGGTTTTCCGAACTTACTGTATACGCGTAAA
AGTTGTCTGCAGTAGGAGCAGAAATCATcaatctatatttttatttcaaa
tctaGTACTCCTGAAGATACCGGCAAGGAAAATGCTATAAACCAACATAA
CAGCGATGTAACGGACAACCTTcaagaagaaaagaacaaatcaaCAAAAG
AGAGATCGTCATCAGTGGAGAAAAACACACAGGAAGAAAAATCCAACAAT
GCCCACAACACAACAATGACAACAGACAGTTCATTTGCTTCTTCTTCCAA
CGACCACCAAACGGCATCATCTTCAACATCCTCCCTAAACAATGTCAGGT
AATGCCAATTCCTTTTTACACAGGGAAAGTATTTCTTTGTGTCCGAAACA
TGCTTTTTATaacgaaaaatttatttttgaaaaatagcagCGAGTTTGCT
ATAAATGTTTGATTACATAAAGTAAAAACAAATCTTaagatgaataaaaa
attattttacacgAGCCCCTTCTTCTCGAAATGGATGAGTTGATGATCAT
CTTCCTTCTTCTTGCAACATTGACAATATAAAAGACACGATGTTAATAAG
TTCCCAAACATCAACATCTCcatcagaaagaaaaatagaagcaTACCAAA
GTCTATAGAGGTCAGGTTTTCCAGACTTCTGTTTGATTCATATGCACGAA
TGTATCTTACTCGCGATCTTGGTAAAAGAACGATACTTATAAACAGGATG
ATCGCTGAGCGGTTGGCCAGTTGAAACGCATCGAAACCTAACTTGATGGA
AAGAAATGCtgtgctttttttgaaaactgcAATGTACCCTAAGGTGATAT
TGATGATTAAAGATAAATGTGTCCATGCTGGGAATGTGTTGTATGTTTGC
AAGAACACGCCAATCATATCATCTTTGAATTTTCCTCCGAATCCATAATA
AAGTGATCTTGCCATTATTGTCATAAAAACGAATACCATCAGTAAATGTG
TCAATACACGTTGTCTTTTCCATATTTTAAGTTCCTCAGTGTTTGAAAAC
CGTTTGTCCATTTTTACGGTGAGATTGGAATATTTTATACTTCCTCCTTT
CCTTTATTGATTGTTGTTCGCCTTATTGTTAACTGCTTATTGGAAACCTT
AACTCACTACGTCGAAATTAAAAGTTGGAGGATGGTAACCATTGTTGAAC
aagtcattaaaaaataatgcGATTCATTAATTCCGTTTACATCGTTTTCA
ACATGATCATGTCTCTTCTATTTTTTACAAGAAGTAGACCAGCTAAATTT
CTTTAACACAACTGCACAATATCTCAAGAAGCATTCTCCTCAATAAAAAT
AACGTATATGTCTGATAACATACAAAACGAATTGTACGTTTAACTTCACA
CGATAaccaaaaatattacaaaaccGTAAACCGATTAGATGTTATCAAAG
AAAATGATACACGAAACTTTTACTCGCCAAATGATTGAAGTTAGGACTTC
AGTGTTAACTCATACTCATAAAAGACTCAATGGAGGTCGGTCAAAATAAA
CAAGGAGGTGGGAAATTTCTGTGTATTGCACACATATGGTGCTTCTTGGA
TTGTAATGTTTATGAAAGTAGACGCACTATCTTTTTTAGATCTTCCAGTA
ATGCTAGTGGAGAGAAAGATTAGCGTTATTTTAAACTGCAAACCACGATA
GTGAAATGATTCTAAGAAAAAACTTACAACTCACAACCTCAGCTTTCTAA
AAGATTTGGCTGAGGTGGTTTTGAGCTATGACCTGTTTACAGTGGGatga
aattgaattattttgggtactttaatgggataaactttcgcggggattaa
atttcgtggatttcgaggaaaatccgcgaaattaagtcccaatggaaatt
tggaagggcctcatccgcgaattATTTCTcaataaaactcaaaatatgtc
aaataaatactattttgaatggttacttgcatcaaagaagcgctaataat
gtgtacttcaacaaccaacatgcatgttttttgacagtaaaagtaacaaa
atcgtgaaaataatgccacccaatagtgccacccgcgaaatttttgaatt
tcgcggataagcccaaccgcgaaagtttatcccattaaagtataatttTA
CGTCCGTAGGCGTCAAAGGGTTAAATATTGAGTTCTTCTCTTTTGTAGCC
TGGATGAGATGATCGATTTGAAAGGAAAGACTTGGGATGATTGGTTCCTG
GAGAAAGCCATGCTTGAGATGAAGAGAATCAAACTGATCAACGTCaagaa
gaaagagttggacaagaaacgttcacaagaacgagaagagaagatgaaga
aagaaaTGCAAGCAGCAGAAAATCGTCAAGATTGGATGaagaggaaaaag
ttccaagcTGAAAAACAACGGTGTGAAGAACTCgctcaaaaagaatttca
aagatTAAAGGTATGTAAATGTTCAAATGCCAATTATGGAGAGGACTGTC
TGCTTATCTGTTTAATATGAATAGATAAACTAAACCTTGGGCCATTTGCT
TTATATAACCTTTCCcacaaatatttttccaaaagtttgcttacaaaagt
cttaacttaaaaataaaaagtttttcttaaaagttttaacttacaaaaag
tctttCTGAGTATTTATTAGCCAAAAATTTAACTCAATAACGTCACAATT
AGAGATTCGATTAGTCGGATTGATTTCAATGCTCTGCGAAAAATAGCTGT
TAGTACGGCATGGGGTAAACCTTTCTGAGACAACCCCCACTAGTACTAGT
GTCACCTTAATAAACACTTGATGAAGGGAAAAAGTATAAACTTACTATCC
ttgaaacttttattttttgaaataggaAAAGCAAGAGAAGGACTTACTTG
AGGAAAAAGCCAAACAGAATTACGATGAATGGTacgagaagaagaaagct
caagaaaaagaagcacgtttacgaaagaaacacgagagaaatttggaaga
agagagaattcaagaGAAGCAGCAGCAAGCGGATGATGCTTACAAACGAT
GGCTGTCGCAAACTGACGAGCAAAGTAAACCTTTCAGATATCATGGAGGA
GGACGTGTgtccaaaaagaaaaacctttacTCGTCTCCTGATCCGACCTT
CACGAACCCTTTACCATGGGTGGATAGTGTGATGGAGGAGGAGAAAATGT
ACAGGTGTAATCaccaaaagaaaatcttctcaTCACCTCCAATGTTGTGG
CAAGATATTGAAAACCGCCGCAAACGAACTTCTGATAACAGGTTGAGGAA
AACTTCGGTCACGTGA Coding sequence (CDS) from alignment at sc0000058_pilon:935639..943104+ >XLOC_012210 ID=XLOC_012210|Name=XLOC_012210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000058_pilon:935639..943104+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCAAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAA
CACAACTTTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTG
GTGGAGGAGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTG
CTTGCTCCAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTC
CAGTATTAAGACACCAAGGAATCACagtaaaaacagtttttccaaTGAGA
GGGTTGCATTGGTTACAGGAGGAAAAAGATGTTTCAAGATACACCAAGGT
CTTCATCTCCAATCAATAATGAGAAAAACACAACTTTTGGAAAGAGTCAA
TTGTCAACAGCCTTTTCATTTCCTGCTGGTGGAGGAGATAATTTATTTCA
AGAAACAGGAGACTCAACACGCTCTTTGCTTGCTCCAATATATAGCAAGC
AAGAAAAGGCTACTCTTGATATTTCTTCCAGTATTAAGACACCAAGGAAT
CACagtaaaaacagtttttccaaTGAGAGGGTTGCATTGGTTACAGGAGG
AAAAAGTACTCCTGAAGATACCGGCAAGGAAAATGCTATAAACCAACATA
ACAGCGATGTAACGGACAACCTTcaagaagaaaagaacaaatcaaCAAAA
GAGAGATCGTCATCAGTGGAGAAAAACACACAGGAAGAAAAATCCAACAA
TGCCCACAACACAACAATGACAACAGACAGTTCATTTGCTTCTTCTTCCA
ACGACCACCAAACGGCATCATCTTCAACATCCTCCCTAAACAATGTCAGT
ACTCCTGAAGATACCGGCAAGGAAAATGCTATAAACCAACATAACAGCGA
TGTAACGGACAACCTTcaagaagaaaagaacaaatcaaCAAAAGAGAGAT
CGTCATCAGTGGAGAAAAACACACAGGAAGAAAAATCCAACAATGCCCAC
AACACAACAATGACAACAGACAGTTCATTTGCTTCTTCTTCCAACGACCA
CCAAACGGCATCATCTTCAACATCCTCCCTAAACAATGTCAGCCTGGATG
AGATGATCGATTTGAAAGGAAAGACTTGGGATGATTGGTTCCTGGAGAAA
GCCATGCTTGAGATGAAGAGAATCAAACTGATCAACGTCaagaagaaaga
gttggacaagaaacgttcacaagaacgagaagagaagatgaagaaagaaa
TGCAAGCAGCAGAAAATCGTCAAGATTGGATGaagaggaaaaagttccaa
gcTGAAAAACAACGGTGTGAAGAACTCgctcaaaaagaatttcaaagatT
AAAGCCTGGATGAGATGATCGATTTGAAAGGAAAGACTTGGGATGATTGG
TTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAATCAAACTGATCAACGT
Caagaagaaagagttggacaagaaacgttcacaagaacgagaagagaaga
tgaagaaagaaaTGCAAGCAGCAGAAAATCGTCAAGATTGGATGaagagg
aaaaagttccaagcTGAAAAACAACGGTGTGAAGAACTCgctcaaaaaga
atttcaaagatTAAAGgaAAAGCAAGAGAAGGACTTACTTGAGGAAAAAG
CCAAACAGAATTACGATGAATGGTacgagaagaagaaagctcaagaaaaa
gaagcacgtttacgaaagaaacacgagagaaatttggaagaagagagaat
tcaagaGAAGCAGCAGCAAGCGGATGATGCTTACAAACGATGGCTGTCGC
AAACTGACGAGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTg
tccaaaaagaaaaacctttacTCGTCTCCTGATCCGACCTTCACGAACCC
TTTACCATGGGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTA
ATCaccaaaagaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATT
GAAAACCGCCGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGT
CACGTGAgaAAAGCAAGAGAAGGACTTACTTGAGGAAAAAGCCAAACAGA
ATTACGATGAATGGTacgagaagaagaaagctcaagaaaaagaagcacgt
ttacgaaagaaacacgagagaaatttggaagaagagagaattcaagaGAA
GCAGCAGCAAGCGGATGATGCTTACAAACGATGGCTGTCGCAAACTGACG
AGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaaaaag
aaaaacctttacTCGTCTCCTGATCCGACCTTCACGAACCCTTTACCATG
GGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCaccaaa
agaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAACCGC
CGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:935639..943104 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-1224:7026 |
| Aaloc | 523-783:6350 |
| Aaloc | 280-519:4257 |
| Aaloc | 1-276:1 |
|
