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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:186897..191527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011871 ID=XLOC_011871|Name=XLOC_011871|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4631bp|location=Sequence derived from alignment at sc0000353_pilon:186897..191527+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAGATAATGTACCGTTTCACACTGTCGTTTTTCCATCCTCCCT
TATCGCTGCTAATGATAATTACGTTCTCTTAAACGATATTAACGCCACAG
AATACCTTAATTACGAGGAAGATAAATTCTCAAAAAGCCGTGGTGTCGGT
GTGTTTGGTGATCAGGCTAAAGATACTGGAATCTCGGCTGATATTTTCCG
CTTCTACCTACTGTTTGTACGACCAGAGTCATCGGTAAGTTATTTGGGAT
TTGTAATTTTCTCTTATAAAAGGAATGAATCCACGACACCACTCTTTAAT
AAATTCTTCCATTCTTGTTGAACGATACAAATCGTTCTGTATTCATGAAA
GTGAAGGTCAAATCAGGAGCTTCCGATGAGTTTAACACGTTCACTGCCGA
CCCTTTTGCAGTAATCGAAAATATAACCTCTTGAAACTTtatcgaaagtt
tgactttcagatGCTCCTGTGGACTGAGTTTTGCTTCGCCTTTAATCTGT
ACACCAATCGATGCGGAATTTTACGTAGattccaaaaattcaaaaaaaaa
agaagcaagaGATTCTGTTCCAAAATTTAAAGCTTTTTGGAGTACCACCG
GTATAAAATCCCTGCTCTTTCAAATTATTCTTCAATTCAGTTATCAATTA
GCTTGGCTGATTGCTTAAGGATCCATACTGGTAATATTCAGTGCAGCGTT
GCATAACGCACGCCCTAACTATGAAAGGGCgtatttacttttattttttt
tttccaattcacAGGACAGTGCTTTCCAATGGGCAGATTTGATCACGAAA
AACAATTCTGAGTTGTTGAACAATCTCGGGAATTTTGTGAACAGGTATAT
TTATCCGGAGGaagttttcaatgattttttgaattcaCTGCAGTTCTTAT
CAGATATTGACGACAAGTCTTCAACTACGgcaaattattttttctgtgac
TGCATCTCGCCGTATTTATGATTTAAATTTTGGTGACAACGGGCCTAGtt
tttttCACACTAACTAACCTATTTACTTTAATTGTCAAAGTGTGCCATGT
CATAATggattaaaacattttcaactttGCTGAGTTTGTGAGCTAGATCA
TTTTTATGAACCTGCTGATGGTATGAACACCGAAAAGCTTcgataaatat
aaaaattgtttcaagaattttttaattttttgttttaatctatttacctt
aattcattcctttttggttctttcagagctttGATGTTCTTAAAGAACAG
TTTCAATTCAACAATGCCAGAACTGAAGTTGAACGAAGAGGACTACAAAT
TGATCACCCACGTTGATAAAGAGCTTCAAGAATATGTCACACATCTTGAC
AGTATTAAGTAAGAATTGCACGATTTTACTCAACACACACCGACGCACCT
TCTAAATAATTAGGAATAGTAGCTCACACACTTGATTTGTACTTGACCAT
GGTGGATAAACCAGCAAGGCGTCACAGCAAGTCGTTCAAGTCATCTAAAA
GCATGTTTTACGCTAAAACTGTCAACCAAAACAAACTACAtactattttg
aaaatgttgacaCACAGTCAAGTTCCCAGTTTTGTAGCGAATAGTTTATT
ACTTTTTGCAAAGATGGAAAGACTATCGATTCACAACGATCTTagctttt
tttcacttttgtttttcCAATGTTCCTTTAGGTTGCGTGATGGTCTCAAG
TTCATTTTGAACATATCTCGCCATGGCAATCAATACATCCAAGCAAACAA
ACCATGGGTCATGGTCAAAGGTACGGACGCCGAAAAAGAGCGTGCCGGAA
CTGTCATTGGTCTCGCTACGAACGTCTCTGCATTACTGTGTATCCTCGTA
AAACCTTACATGCCAGCAATCAGTTCAACTTTACAGCAACAGCTGGCGTT
AGCGGATGATAAATTCGTTATCCCGGATAACTTCGTTCAACTACTACCGA
CGGGACACGTCTCTGGAACTCCTGCTCCGTTGTTCCAGAAACTGGAAGTT
GCTTTCGGGGAAGAGATGAAGAAACGTTTTGCCGGCAAACGACCGGAACC
AgtaagttttacttttttaatttagttttagCTTCTTATTCAATATTGAT
AATCTAAGATTAGCACCTGAAACTGAGCTCTTAATTTAGGTattatagta
gggggccaaccctggggttccgtgacatcttttctacgacctaaccattt
ttagtttattccaaagaacagtatattacaagatatttttgagagggagg
acgcggattaggcccgggaaaactttttgtgatcaaaatagtgacgccat
aggcaaaactgcaagggaaaataaggagtagagaaatagcttattttcaa
aagtcaaaacaaacaaaaatgattgatACCATCTGATAgatcatgaaatt
ctgagcaaaaaaatgtattacaacaactctctgattaaaacacacaaaga
aatataGCTGCTTTAAGatcaactaactgtcagctctattgtgatttgac
gtcaaatcttgtcttgatcgttactgacgtcggtatgtttttgaacttca
agcggcTATATTTCAtcgtgtgttttagtcagagagttgttgtaatacat
ttttttgctcagaatttcatgctctttcagatggtaccaatcaatttcgt
ttattttgacccATTTTGACTTTCGAAAATCAGCTATTTtcctacccctt
attttcccttgcagttttgcctatggcctaaaagttttcccgggcctaat
ctgcgtcctccctctcaaaaatatcttgtaatatactgttctttggaata
gactaaaaatggttaggtcgtaaaaaagatgttaCGGGACctcaggcttg
gccccctactattagTGATTAAAAGAAGGAAAAAGTTAAGCAGTTACTTA
TATGAATCCAACCAGTTAGCCAATGAAAAACGATGTGTCGTTTCGCCACC
TATTATTAGTTagatagtaagtaagtaagtctgcgaccgcagtcggaggc
gacccgaaggctcctctttcgatagctatctacccgaaggtaggggaggg
cgccactctttctccctggattgctccacttacccttgatcattcactta
attgctgagcatcaagcagagaggcatcaagtaccattttggaaatcttt
ggtatgacccggctgggggttgaacccacaaccttgcgaaccgtagcctg
ATGCTCTaacactgcactacggtcgctctAGTTAGTTAGATAGAGTACAG
CAGTTAAAATTAGTTTGACATtaaattttccttcaaagagTCTTCTGTTG
TACCAAATAATTAACGCATCTTTTTGTAAATCTATTTTCGGACACCTAAT
ACTCAAAAGTTTAGGGCTAGACCTAACTTGGCACCTTCGGTTGGGACTAA
TTTCCCCCAAAACTGATTATGGGTTagccaaatatttcaattccaaaCCT
TAAACGCGTTTGTCTCGATCTACTCTGCTTCTCCCTACCCAGATGTACGA
TTTGGAAGTTAAACTTTTATTGGTTTAGAAATAGAGTACAGTAGTAGTTA
AAAGTAGTTTGTTGACATCAAATTGTCCTTCAAAGAGTCTTTCTGTTGTA
CCAAATAAATAACGCATCTTTTTGTAAATCTATTTTCCAACACCTAATAC
TCAAAAGTTTAGGGCTAGACCTAACATTTCTCAATTTGAATTAAGAGTAT
CAAGTGTTTAATAGTTGGAAGTTTAGATCAGACAATGAACGTCAATTTTT
AAGGATGAGTAAATCTAAATGTAGTTTAGAATAATACAGTTTATAACCGA
CAGAATATCGTGAAAGTCAAGATTTCAAGCTTTGATATGATGAGATTCAC
ACTTAACTTcagaatgaaaagaaaactgcAAAGAAAGCAGCTCAATCAAA
GACAACGCCCTCACAAACGCCTGCTACGACTTCGTCAACGCCCGCCGTAA
CTGCTGACCCAGCGAAAATtaaagaacttgaagaaaaagTGACAAAACAG
GTATTTATagagattttgtaatttcaacATGTTATTTATTTAAATGAAAA
GCAAGCTAGGattttagaattaaaaaataCAGAATATTCTATCGAACACT
TTCAATAGCGGacattaaaattttgttttcaaattcgGATGTGTGATAAA
TAGAAGATGAGTCATCTAAACTAGCAGACCTTTTATTTCTAGATGCGCAT
GTATTAATGTTCATCGCGGAGAGCGAATTGGGGTCGATTGTTTGATTCAA
GGACAATTACCCCCAGGACAATTGCCACCTGGCAATTACCCCTAGGACAA
TTGTCTCCCAGACATTTGCCCAGGACTATTGTCTCCCAGACATTTACCCA
GGACAATTGTCTCCCAGACAGTTACCCAATTATCTGGGGGCATTTCtctg
ggggcaattgtcctgtcACCATTGTTTTAAGAAAACATTCAATTCATATG
GAATCCCTTTTTCCTATCATAGGGCAACTTGGTTCGAGAATTAAAGACAT
CGGGTGCTGACAAAGCCAAAATTACCGAAGAAGTTCAAGCCCTGTTGGCC
GTAAAACGAGAGTTAGCTTTAGCCACTGGTgaaaatcctgatgaaaaacc
taaaggtaaaaagaagggcaaaaagaagtaa Coding sequence (CDS) from alignment at sc0000353_pilon:186897..191527+ >XLOC_011871 ID=XLOC_011871|Name=XLOC_011871|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000353_pilon:186897..191527+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAGATAATGTACCGTTTCACACTGTCGTTTTTCCATCCTCCCT
TATCGCTGCTAATGATAATTACGTTCTCTTAAACGATATTAACGCCACAG
AATACCTTAATTACGAGGAAGATAAATTCTCAAAAAGCCGTGGTGTCGGT
GTGTTTGGTGATCAGGCTAAAGATACTGGAATCTCGGCTGATATTTTCCG
CTTCTACCTACTGTTTGTACGACCAGAGTCATCGATGGCTAAAGATAATG
TACCGTTTCACACTGTCGTTTTTCCATCCTCCCTTATCGCTGCTAATGAT
AATTACGTTCTCTTAAACGATATTAACGCCACAGAATACCTTAATTACGA
GGAAGATAAATTCTCAAAAAGCCGTGGTGTCGGTGTGTTTGGTGATCAGG
CTAAAGATACTGGAATCTCGGCTGATATTTTCCGCTTCTACCTACTGTTT
GTACGACCAGAGTCATCGGACAGTGCTTTCCAATGGGCAGATTTGATCAC
GAAAAACAATTCTGAGTTGTTGAACAATCTCGGGAATTTTGTGAACAGGA
CAGTGCTTTCCAATGGGCAGATTTGATCACGAAAAACAATTCTGAGTTGT
TGAACAATCTCGGGAATTTTGTGAACAGagctttGATGTTCTTAAAGAAC
AGTTTCAATTCAACAATGCCAGAACTGAAGTTGAACGAAGAGGACTACAA
ATTGATCACCCACGTTGATAAAGAGCTTCAAGAATATGTCACACATCTTG
ACAGTATTAAagctttGATGTTCTTAAAGAACAGTTTCAATTCAACAATG
CCAGAACTGAAGTTGAACGAAGAGGACTACAAATTGATCACCCACGTTGA
TAAAGAGCTTCAAGAATATGTCACACATCTTGACAGTATTAAGTTGCGTG
ATGGTCTCAAGTTCATTTTGAACATATCTCGCCATGGCAATCAATACATC
CAAGCAAACAAACCATGGGTCATGGTCAAAGGTACGGACGCCGAAAAAGA
GCGTGCCGGAACTGTCATTGGTCTCGCTACGAACGTCTCTGCATTACTGT
GTATCCTCGTAAAACCTTACATGCCAGCAATCAGTTCAACTTTACAGCAA
CAGCTGGCGTTAGCGGATGATAAATTCGTTATCCCGGATAACTTCGTTCA
ACTACTACCGACGGGACACGTCTCTGGAACTCCTGCTCCGTTGTTCCAGA
AACTGGAAGTTGCTTTCGGGGAAGAGATGAAGAAACGTTTTGCCGGCAAA
CGACCGGAACCAGTTGCGTGATGGTCTCAAGTTCATTTTGAACATATCTC
GCCATGGCAATCAATACATCCAAGCAAACAAACCATGGGTCATGGTCAAA
GGTACGGACGCCGAAAAAGAGCGTGCCGGAACTGTCATTGGTCTCGCTAC
GAACGTCTCTGCATTACTGTGTATCCTCGTAAAACCTTACATGCCAGCAA
TCAGTTCAACTTTACAGCAACAGCTGGCGTTAGCGGATGATAAATTCGTT
ATCCCGGATAACTTCGTTCAACTACTACCGACGGGACACGTCTCTGGAAC
TCCTGCTCCGTTGTTCCAGAAACTGGAAGTTGCTTTCGGGGAAGAGATGA
AGAAACGTTTTGCCGGCAAACGACCGGAACCAaatgaaaagaaaactgcA
AAGAAAGCAGCTCAATCAAAGACAACGCCCTCACAAACGCCTGCTACGAC
TTCGTCAACGCCCGCCGTAACTGCTGACCCAGCGAAAATtaaagaacttg
aagaaaaagTGACAAAACAGaatgaaaagaaaactgcAAAGAAAGCAGCT
CAATCAAAGACAACGCCCTCACAAACGCCTGCTACGACTTCGTCAACGCC
CGCCGTAACTGCTGACCCAGCGAAAATtaaagaacttgaagaaaaagTGA
CAAAACAGGGCAACTTGGTTCGAGAATTAAAGACATCGGGTGCTGACAAA
GCCAAAATTACCGAAGAAGTTCAAGCCCTGTTGGCCGTAAAACGAGAGTT
AGCTTTAGCCACTGGTgaaaatcctgatgaaaaacctaaaggtaaaaaga
agggcaaaaagaagtaaGGCAACTTGGTTCGAGAATTAAAGACATCGGGT
GCTGACAAAGCCAAAATTACCGAAGAAGTTCAAGCCCTGTTGGCCGTAAA
ACGAGAGTTAGCTTTAGCCACTGGTgaaaatcctgatgaaaaacctaaag
gtaaaaagaagggcaaaaagaagtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000353_pilon | genome | sc0000353_pilon:186897..191527 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 955-1113:4473 |
| Aaloc | 817-954:3863 |
| Aaloc | 448-816:1683 |
| Aaloc | 316-444:1228 |
| Aaloc | 235-312:765 |
| Aaloc | 1-234:1 |
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