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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:241213..243198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011868 ID=XLOC_011868|Name=XLOC_011868|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1986bp|location=Sequence derived from alignment at sc0000353_pilon:241213..243198- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTATCCTTCTTCAAAGCTATTGGAGATTTTCGTAAAACAATTGGTGA
ACTAAAATGCAGTTTAGTGCACCTCAAAGAAGTATTTTCCAGTTTGTTAC
GAATAAGTCAAGATATTGAAGATCTGACTGGAGAAGTTAAGAACATCGTG
GAGTTCTATACTATTGAATCAAAAACAACCATACGCGGTCAATTGGATAA
TTTGATAACATCTGAAGCAAGCCAAGAGTTGTATTACAAAGATTTTTATA
ACTATTTTCGATATTTGGTGAATAATGAATTGGTGCGTTTGGTACATGAG
TTTGGTTACGGTAAGCAGGTGTTGGATGTTGCTATGCGAATTTTGGCGCA
ACTTAAGGAAACAGTTGGAAAGATAGTTGAAGTGGTACCGCAAGACATAC
AACGAATCCAGATTCTAAATCAAATTTCAGACTTTATAACACAGATTGAA
CAAAATATAATCAGCGATTTCGACCGTAATAAAGAGAACGCCGAGGCGTG
TTCCAAAGTGGAGAACATCAGCATCAGGTTATTTTGCGAACAAGAGAAAC
TGTCACATGAGTTTGAACAGACTTTGGCGAGCGGATTAGGTGTGTTCTTA
AAAACACAAAATGAACCAATGATGTGTCCATCATTAGAGACCGAATTTAT
AAAGGATAGAACATCAAACGATTTTCATTTCGAAAAAGAAGAACTTTATC
GTAAAAGGACTACGAGGATACGAGAATTACGACATTATTTATCTTCTAAA
ATCAAACTGAAAAAAATTGGAGACTATTATCGGGAGGAAATCTCCCTTCA
GATACAGCTGGATTTAAAACATGCTTCTGAAACTTTGCAAAAACATGAAG
CCCCTATCCACACTACAATTGAAGATTGGATCCAAATTTTGCATCAGTTA
CCCAAACACCATTTCAAAGAAGTTTTTGATGACGTCAAAGTGAGCGAGAC
AAGCAATGCTCTGGAAAAGATAATCGAGAAAAAAGTCGCACCAGAGCTTG
ATGATTTAATCAAAGATATCAACGTGCCAAAAACGTTAAAAAAAATGGAA
CGCCAGATCGTTAAAAAGGGTAAAAAAGCATTAGCAAATTTTAAAGAAAC
AAATAAGGATGGGAAATTGAATATAATTCTAACGGGGCTAAAAGAACTTG
CGTTCGTTAAAGAGGTAAGGTTAATTTCGATTGTTGAGCAAGCACTAGAC
AAACCCAATTGTAATGACGACAGCGACTTTGGGATTCTCTCAAAGTTAAA
CGAAAAGAAAGAAAATATTTTATCCAAATTGGAAAGCATTGATCTTGAAC
AACAGGCCGTAGATCTAGTTCAAAAGAAGTTAATATCTGGTCATGATGTA
GTGAGCGCAAAGGTACAAGAACTCTTTCAAAAATTGGAGAAAACATTCAA
AGAAAAATTGGAAAATAAAGACGCTACTAAATCTTTGTTAGATTTATTCC
AGAGACAAATCAAACCTTGGGTTGTTAAAGATAGAATTAAAAGAAATTTG
GAGACTGGACTCCAGTTTATGGACCAATCAAATTTGAGAAATGGTGACAT
CAGAACAAGAAGTTATACTACCGGTAGCATAGACTTTCAAACACCAGAAA
AGATGTTCAGAGTGGGAGACAACAGCAGCGTTGCCAAAGCGTCAGAGCTA
AGAAGTGACAAAAAATTGGAAGAATTTCACTTAGTAAAAGAAGGAAATAA
TCAATACAATACAGACATTCGAATCGCGGTTGTCAAAGAGTTGATAGAGA
ATTTTTCTGGGCATGGAACCGAGTCTTTTAAACAGCTGCTGGTGGATCAC
TTGGTGAAAGGAGATGTGGTACTTCATATTAAGGAGCTGATTGGACAACT
AGTCCATCGGTTGATGATCACCACGGAAAATATTGATATTCCCACAGCTG
AGTCTCAACAAACTGAGGAATCTGGGAATAACAATATTAAACAAACAAGA
AGAAATTCTATTGAGAATGTAAAGAGAAATAATGAG Coding sequence (CDS) from alignment at sc0000353_pilon:241213..243198- >XLOC_011868 ID=XLOC_011868|Name=XLOC_011868|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3972bp|location=Sequence derived from alignment at sc0000353_pilon:241213..243198- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTATCCTTCTTCAAAGCTATTGGAGATTTTCGTAAAACAATTGGTGA
ACTAAAATGCAGTTTAGTGCACCTCAAAGAAGTATTTTCCAGTTTGTTAC
GAATAAGTCAAGATATTGAAGATCTGACTGGAGAAGTTAAGAACATCGTG
GAGTTCTATACTATTGAATCAAAAACAACCATACGCGGTCAATTGGATAA
TTTGATAACATCTGAAGCAAGCCAAGAGTTGTATTACAAAGATTTTTATA
ACTATTTTCGATATTTGGTGAATAATGAATTGGTGCGTTTGGTACATGAG
TTTGGTTACGGTAAGCAGGTGTTGGATGTTGCTATGCGAATTTTGGCGCA
ACTTAAGGAAACAGTTGGAAAGATAGTTGAAGTGGTACCGCAAGACATAC
AACGAATCCAGATTCTAAATCAAATTTCAGACTTTATAACACAGATTGAA
CAAAATATAATCAGCGATTTCGACCGTAATAAAGAGAACGCCGAGGCGTG
TTCCAAAGTGGAGAACATCAGCATCAGGTTATTTTGCGAACAAGAGAAAC
TGTCACATGAGTTTGAACAGACTTTGGCGAGCGGATTAGGTGTGTTCTTA
AAAACACAAAATGAACCAATGATGTGTCCATCATTAGAGACCGAATTTAT
AAAGGATAGAACATCAAACGATTTTCATTTCGAAAAAGAAGAACTTTATC
GTAAAAGGACTACGAGGATACGAGAATTACGACATTATTTATCTTCTAAA
ATCAAACTGAAAAAAATTGGAGACTATTATCGGGAGGAAATCTCCCTTCA
GATACAGCTGGATTTAAAACATGCTTCTGAAACTTTGCAAAAACATGAAG
CCCCTATCCACACTACAATTGAAGATTGGATCCAAATTTTGCATCAGTTA
CCCAAACACCATTTCAAAGAAGTTTTTGATGACGTCAAAGTGAGCGAGAC
AAGCAATGCTCTGGAAAAGATAATCGAGAAAAAAGTCGCACCAGAGCTTG
ATGATTTAATCAAAGATATCAACGTGCCAAAAACGTTAAAAAAAATGGAA
CGCCAGATCGTTAAAAAGGGTAAAAAAGCATTAGCAAATTTTAAAGAAAC
AAATAAGGATGGGAAATTGAATATAATTCTAACGGGGCTAAAAGAACTTG
CGTTCGTTAAAGAGGTAAGGTTAATTTCGATTGTTGAGCAAGCACTAGAC
AAACCCAATTGTAATGACGACAGCGACTTTGGGATTCTCTCAAAGTTAAA
CGAAAAGAAAGAAAATATTTTATCCAAATTGGAAAGCATTGATCTTGAAC
AACAGGCCGTAGATCTAGTTCAAAAGAAGTTAATATCTGGTCATGATGTA
GTGAGCGCAAAGGTACAAGAACTCTTTCAAAAATTGGAGAAAACATTCAA
AGAAAAATTGGAAAATAAAGACGCTACTAAATCTTTGTTAGATTTATTCC
AGAGACAAATCAAACCTTGGGTTGTTAAAGATAGAATTAAAAGAAATTTG
GAGACTGGACTCCAGTTTATGGACCAATCAAATTTGAGAAATGGTGACAT
CAGAACAAGAAGTTATACTACCGGTAGCATAGACTTTCAAACACCAGAAA
AGATGTTCAGAGTGGGAGACAACAGCAGCGTTGCCAAAGCGTCAGAGCTA
AGAAGTGACAAAAAATTGGAAGAATTTCACTTAGTAAAAGAAGGAAATAA
TCAATACAATACAGACATTCGAATCGCGGTTGTCAAAGAGTTGATAGAGA
ATTTTTCTGGGCATGGAACCGAGTCTTTTAAACAGCTGCTGGTGGATCAC
TTGGTGAAAGGAGATGTGGTACTTCATATTAAGGAGCTGATTGGACAACT
AGTCCATCGGTTGATGATCACCACGGAAAATATTGATATTCCCACAGCTG
AGTCTCAACAAACTGAGGAATCTGGGAATAACAATATTAAACAAACAAGA
AGAAATTCTATTGAGAATGTAAAGAGAAATAATGAGATTGTATCCTTCTT
CAAAGCTATTGGAGATTTTCGTAAAACAATTGGTGAACTAAAATGCAGTT
TAGTGCACCTCAAAGAAGTATTTTCCAGTTTGTTACGAATAAGTCAAGAT
ATTGAAGATCTGACTGGAGAAGTTAAGAACATCGTGGAGTTCTATACTAT
TGAATCAAAAACAACCATACGCGGTCAATTGGATAATTTGATAACATCTG
AAGCAAGCCAAGAGTTGTATTACAAAGATTTTTATAACTATTTTCGATAT
TTGGTGAATAATGAATTGGTGCGTTTGGTACATGAGTTTGGTTACGGTAA
GCAGGTGTTGGATGTTGCTATGCGAATTTTGGCGCAACTTAAGGAAACAG
TTGGAAAGATAGTTGAAGTGGTACCGCAAGACATACAACGAATCCAGATT
CTAAATCAAATTTCAGACTTTATAACACAGATTGAACAAAATATAATCAG
CGATTTCGACCGTAATAAAGAGAACGCCGAGGCGTGTTCCAAAGTGGAGA
ACATCAGCATCAGGTTATTTTGCGAACAAGAGAAACTGTCACATGAGTTT
GAACAGACTTTGGCGAGCGGATTAGGTGTGTTCTTAAAAACACAAAATGA
ACCAATGATGTGTCCATCATTAGAGACCGAATTTATAAAGGATAGAACAT
CAAACGATTTTCATTTCGAAAAAGAAGAACTTTATCGTAAAAGGACTACG
AGGATACGAGAATTACGACATTATTTATCTTCTAAAATCAAACTGAAAAA
AATTGGAGACTATTATCGGGAGGAAATCTCCCTTCAGATACAGCTGGATT
TAAAACATGCTTCTGAAACTTTGCAAAAACATGAAGCCCCTATCCACACT
ACAATTGAAGATTGGATCCAAATTTTGCATCAGTTACCCAAACACCATTT
CAAAGAAGTTTTTGATGACGTCAAAGTGAGCGAGACAAGCAATGCTCTGG
AAAAGATAATCGAGAAAAAAGTCGCACCAGAGCTTGATGATTTAATCAAA
GATATCAACGTGCCAAAAACGTTAAAAAAAATGGAACGCCAGATCGTTAA
AAAGGGTAAAAAAGCATTAGCAAATTTTAAAGAAACAAATAAGGATGGGA
AATTGAATATAATTCTAACGGGGCTAAAAGAACTTGCGTTCGTTAAAGAG
GTAAGGTTAATTTCGATTGTTGAGCAAGCACTAGACAAACCCAATTGTAA
TGACGACAGCGACTTTGGGATTCTCTCAAAGTTAAACGAAAAGAAAGAAA
ATATTTTATCCAAATTGGAAAGCATTGATCTTGAACAACAGGCCGTAGAT
CTAGTTCAAAAGAAGTTAATATCTGGTCATGATGTAGTGAGCGCAAAGGT
ACAAGAACTCTTTCAAAAATTGGAGAAAACATTCAAAGAAAAATTGGAAA
ATAAAGACGCTACTAAATCTTTGTTAGATTTATTCCAGAGACAAATCAAA
CCTTGGGTTGTTAAAGATAGAATTAAAAGAAATTTGGAGACTGGACTCCA
GTTTATGGACCAATCAAATTTGAGAAATGGTGACATCAGAACAAGAAGTT
ATACTACCGGTAGCATAGACTTTCAAACACCAGAAAAGATGTTCAGAGTG
GGAGACAACAGCAGCGTTGCCAAAGCGTCAGAGCTAAGAAGTGACAAAAA
ATTGGAAGAATTTCACTTAGTAAAAGAAGGAAATAATCAATACAATACAG
ACATTCGAATCGCGGTTGTCAAAGAGTTGATAGAGAATTTTTCTGGGCAT
GGAACCGAGTCTTTTAAACAGCTGCTGGTGGATCACTTGGTGAAAGGAGA
TGTGGTACTTCATATTAAGGAGCTGATTGGACAACTAGTCCATCGGTTGA
TGATCACCACGGAAAATATTGATATTCCCACAGCTGAGTCTCAACAAACT
GAGGAATCTGGGAATAACAATATTAAACAAACAAGAAGAAATTCTATTGA
GAATGTAAAGAGAAATAATGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000353_pilon | genome | sc0000353_pilon:241213..243198 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 25-2010:1987 |
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