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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:10747..13826- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011836 ID=XLOC_011836|Name=XLOC_011836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3080bp|location=Sequence derived from alignment at sc0000059_pilon:10747..13826- (Clytia hemisphaerica_ch_hm2_pilon)
CAGTTGTCAGCTATAGATACTGAAAACTCATTATATAGTTTACGGTTTAC
GGAGCAAGATGTTAGAGAATTCACTCCGGATAAATCTAAAGAAGAAGAAA
TGCTTGCTGTTCAACACCCTACTTTTCCAACTGTTGTGAAAATCAGCCAA
TATTCTTATGCTGTCATTGGTCCGGTATCAACGTCAACACCAGTGAGATA
TACCCATGTTCAAACTAATGGAAAAGATGGCTGGTACTGCACTAACAATT
CATGCAAGAAAAAGAAAGGAGCAACAAAAAGGGTAAATTTTGATTTTAAT
TTTAAGGCTAATGAGTTTCTGAGTTTGTCATGTGGCAGTCTTGATTATGT
TCCTCGCGCAAAGGCAAGGGGAGTCAATAAACTAGTTTACAGTTGCTTTT
GAAGAAATATTTCATCCAGTATTGGGCAAAGGGAAGTTTGATATTAGTTT
ACTGTATGAAAATATGAAAACAAACTGATTATAAATCAATAATATTCAAT
TGTGAATTGCATCAACCGTTAGATCAGGTAACTTGCATCAGTGGAGGCAA
ACATGCATAGCCCTCAAATGAATGACCTGTCTGGTCATTAAAGTACAAAG
TTAAATCAGAACAAAAATGGTAGAGTAGATCTGCGTGCGGAGCTGCGTAG
TTCATTTGTTTTGAAATTTTGCTGCCTTGATTGGTCAGTCATTTGATGGC
TATGCAAGTTTCCCTCCACTGATGCAAGTTACACGATTTCACGGTAATAC
TTAGCATGAATTTACTACTCCTTACTTTCATTTTTAAGGTTCATGGCAAA
ACTACTTGTATTCATAGACATTATGTTTACTTGGCAAGAAAGATAAAAGA
AAGTCCTGGTCCTGGAATATCTAAAACAGTTTCAAATTCAGATGTTGAGG
GTAAGGTTCCATGTTTTGAAGATCAACACAGGCGCAAAACAATTGATCTA
CAATTTAAGTACAGCATTCCCTACATTATCCCACCCAAGATACTTAGACT
GTCTGATAATCTTAATTGCAATGAAAGTTTGATTTTTGAACCAGACACAG
AAGTGTGTAGGCTTTGTGGTTTCTCATTATCAAAATCATCAAATCAACAT
GGTATTAAAGATTGCTACATTATAACAAACAAGGATCCTTTTAATAAAGT
CACAATTAAAGTCAAGAAGTGCCAAGATAAATCGAATTGTGGTGCTACCA
ATATGGTCTTCCCATATGAACAAGGTAAAACAGTTTGTTGTTACTTTGTT
ACTTAAAAATTAAAATAAGTCGCTCACCAGGCTGTTTTTGATGATGTTTC
TTAATAGCACGAATTAAAGAATACTAATCTTTTTTATTTTACTATTCCTT
TTGATTTTATATTCAGGACTGTTCAATGTATCTAACAAGATTTTAGTTGG
ATTGGATATTATGATTGAGATCAGAGAATTCTTTAAAGATGGCGTCCCCC
TGTCAAATATCATTGAAAGGAAGTTGAATTCACTTTTATTGAAGATGGAA
CTGGTATGTTTATTATTCTATGTTGCTACTTACTTTTTAATTGCTTAACT
GGTTGCTCATGTTCTGTGAGGATTTTTAAAGTAGACTATCTCAGCCAATT
GAGTTCAGTTCCCAAAAATAAACTGAAAGGTTTTAATTAGGGCCATAGAT
AATGTCGTCTCATCCAGTCTCATCAGCATTGGAAAGAAAAACTAAGTGCT
TTTTTGGAAATTTCTAAAGTTGCCCCGATCGTTCGAATCTTCCTGATTTT
CGTGAGACCAGCTGACCAACCAACTCTTTTTGAGTGATTTTGGAGGCTAT
TCAAGAAATTGTGTGATGACAACCTAGTGTCTGTAGCCAAATATTAAAAA
CATCTGATTTTGCTTTTAAATTTTTAAATATAACTTAGTTTGAAGTTTGT
TTCATTATTCAAGCATTCTTAAGATACATTTCAAAAGTCACTTATTACCA
TCTGGGACTAACTAAGACCAAAAAATGACCAACTAATTAGACTGCCTGTA
TTTGGCATATCCATATAGATTGCACCTTCCTTATCTTTAAACTAAAACAT
TCAAATTAGAGTGCAAGGAAACAAAAAGGGGGAAGTAAAATGGGACGTGC
AGTTAATTGAAGGTGTTAAATTGATTTTTTCCCAATATGATAACCAGTTA
TTGCATAGTGTCGCGCAATTTGGCTCATTTTTCTGGTTCAAAGGTCTAGT
GAAATAACAAGTAAAAATAAAAGAACTCAAAAAGTAAATGTCATATTGCA
TGCACTCTGCACCGTGCAATAACAAATACGTATTCTCATTTTGTAACTTA
TCTGAGTTAGATAGACTTATTCAAGTATTGAGCTTAAAATATTATATTAT
GAATTTTGTTCTTTATAAATAAATATAGGTGGAAAGACCAAGAAATTCGC
AGATTGATTATTTCGTCAAATTGCTGTATGATGGATTTTATGGCTTTGAG
GCTATGACAGAAAGAAACCTCAATGACAATATTTGTGGATATTGTGGAAT
CATTGGCAGGGTGTACTATGGTGATGGTAATGAAAAAAATTGTTGCAGTT
TGAAGGATGTAAGTGGCAACATTTGACCACTGTTTTGTTTATCCTTTTTT
GAGACTAATGGTCAACCTTTGTGGATGAGTCAAAGTGCTATGAGTTCCTA
ATTCTTTTCTAAGTGCCAAAGAAAAACTTAACAGAGAACTTTATGTTGAT
CTGTTTTTCCTTCTTGACATCTTGATATAAAAGTTAAGATGCTTCAATTA
CTGTACTTCATTTTTACGCTAGTGCAGCACATCAATCTTTATTTTTCTCC
ATAGGTCATAACTGACTCTAAGAAGAAAGTAACAACTTCAAAAAATGACA
TATCAACATGTCAAATTGAAGTTGAACGGAATAAAGAAATTAAAGATGAT
AAGCTATCAACAATGTTATCCAATGTAAAGCAAAACTTGCTGAGGAAATG
TACCTATGCAAAAGATGAATCTTCCTTCAAAATTTCTATTGGAGATCTTG
CACCACTTATACCATCAGCAATGTGTTGTGAAGAAATTAATACTGAAGCT
GACAAAAAAAGTGTCTTTACACATGCTAAG Coding sequence (CDS) from alignment at sc0000059_pilon:10747..13826- >XLOC_011836 ID=XLOC_011836|Name=XLOC_011836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2622bp|location=Sequence derived from alignment at sc0000059_pilon:10747..13826- (Clytia hemisphaerica_ch_hm2_pilon)
CAGTTGTCAGCTATAGATACTGAAAACTCATTATATAGTTTACGGTTTAC
GGAGCAAGATGTTAGAGAATTCACTCCGGATAAATCTAAAGAAGAAGAAA
TGCTTGCTGTTCAACACCCTACTTTTCCAACTGTTGTGAAAATCAGCCAA
TATTCTTATGCTGTCATTGGTCCGGTATCAACGTCAACACCAGTGAGATA
TACCCATGTTCAAACTAATGGAAAAGATGGCTGGTACTGCACTAACAATT
CATGCAAGAAAAAGAAAGGAGCAACAAAAAGGCAGTTGTCAGCTATAGAT
ACTGAAAACTCATTATATAGTTTACGGTTTACGGAGCAAGATGTTAGAGA
ATTCACTCCGGATAAATCTAAAGAAGAAGAAATGCTTGCTGTTCAACACC
CTACTTTTCCAACTGTTGTGAAAATCAGCCAATATTCTTATGCTGTCATT
GGTCCGGTATCAACGTCAACACCAGTGAGATATACCCATGTTCAAACTAA
TGGAAAAGATGGCTGGTACTGCACTAACAATTCATGCAAGAAAAAGAAAG
GAGCAACAAAAAGGGTTCATGGCAAAACTACTTGTATTCATAGACATTAT
GTTTACTTGGCAAGAAAGATAAAAGAAAGTCCTGGTCCTGGAATATCTAA
AACAGTTTCAAATTCAGATGTTGAGGGTAAGGTTCCATGTTTTGAAGATC
AACACAGGCGCAAAACAATTGATCTACAATTTAAGTACAGCATTCCCTAC
ATTATCCCACCCAAGATACTTAGACTGTCTGATAATCTTAATTGCAATGA
AAGTTTGATTTTTGAACCAGACACAGAAGTGTGTAGGCTTTGTGGTTTCT
CATTATCAAAATCATCAAATCAACATGGTATTAAAGATTGCTACATTATA
ACAAACAAGGATCCTTTTAATAAAGTCACAATTAAAGTCAAGAAGTGCCA
AGATAAATCGAATTGTGGTGCTACCAATATGGTCTTCCCATATGAACAAG
GTTCATGGCAAAACTACTTGTATTCATAGACATTATGTTTACTTGGCAAG
AAAGATAAAAGAAAGTCCTGGTCCTGGAATATCTAAAACAGTTTCAAATT
CAGATGTTGAGGGTAAGGTTCCATGTTTTGAAGATCAACACAGGCGCAAA
ACAATTGATCTACAATTTAAGTACAGCATTCCCTACATTATCCCACCCAA
GATACTTAGACTGTCTGATAATCTTAATTGCAATGAAAGTTTGATTTTTG
AACCAGACACAGAAGTGTGTAGGCTTTGTGGTTTCTCATTATCAAAATCA
TCAAATCAACATGGTATTAAAGATTGCTACATTATAACAAACAAGGATCC
TTTTAATAAAGTCACAATTAAAGTCAAGAAGTGCCAAGATAAATCGAATT
GTGGTGCTACCAATATGGTCTTCCCATATGAACAAGGACTGTTCAATGTA
TCTAACAAGATTTTAGTTGGATTGGATATTATGATTGAGATCAGAGAATT
CTTTAAAGATGGCGTCCCCCTGTCAAATATCATTGAAAGGAAGTTGAATT
CACTTTTATTGAAGATGGAACTGGACTGTTCAATGTATCTAACAAGATTT
TAGTTGGATTGGATATTATGATTGAGATCAGAGAATTCTTTAAAGATGGC
GTCCCCCTGTCAAATATCATTGAAAGGAAGTTGAATTCACTTTTATTGAA
GATGGAACTGGTGGAAAGACCAAGAAATTCGCAGATTGATTATTTCGTCA
AATTGCTGTATGATGGATTTTATGGCTTTGAGGCTATGACAGAAAGAAAC
CTCAATGACAATATTTGTGGATATTGTGGAATCATTGGCAGGGTGTACTA
TGGTGATGGTAATGAAAAAAATTGTTGCAGTTTGAAGGATGTGGAAAGAC
CAAGAAATTCGCAGATTGATTATTTCGTCAAATTGCTGTATGATGGATTT
TATGGCTTTGAGGCTATGACAGAAAGAAACCTCAATGACAATATTTGTGG
ATATTGTGGAATCATTGGCAGGGTGTACTATGGTGATGGTAATGAAAAAA
ATTGTTGCAGTTTGAAGGATGTCATAACTGACTCTAAGAAGAAAGTAACA
ACTTCAAAAAATGACATATCAACATGTCAAATTGAAGTTGAACGGAATAA
AGAAATTAAAGATGATAAGCTATCAACAATGTTATCCAATGTAAAGCAAA
ACTTGCTGAGGAAATGTACCTATGCAAAAGATGAATCTTCCTTCAAAATT
TCTATTGGAGATCTTGCACCACTTATACCATCAGCAATGTGTTGTGAAGA
AATTAATACTGAAGCTGACAAAAAAAGTGTCTTTACACATGCTAAGGTCA
TAACTGACTCTAAGAAGAAAGTAACAACTTCAAAAAATGACATATCAACA
TGTCAAATTGAAGTTGAACGGAATAAAGAAATTAAAGATGATAAGCTATC
AACAATGTTATCCAATGTAAAGCAAAACTTGCTGAGGAAATGTACCTATG
CAAAAGATGAATCTTCCTTCAAAATTTCTATTGGAGATCTTGCACCACTT
ATACCATCAGCAATGTGTTGTGAAGAAATTAATACTGAAGCTGACAAAAA
AAGTGTCTTTACACATGCTAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:10747..13826 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1141-1416:277 |
| Aaloc | 961-1140:703 |
| Aaloc | 826-960:1713 |
| Aaloc | 388-822:2293 |
| Aaloc | 106-387:3081 |
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