XLOC_011829 (mRNA) -

Overview
NameXLOC_011829
Unique NameXLOC_011829
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000059_pilon:133679..144012+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011829 ID=XLOC_011829|Name=XLOC_011829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10334bp|location=Sequence derived from alignment at sc0000059_pilon:133679..144012+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCTGACTCTTTTAGATCACTTTCTCATTATAGGATGAGGGTATT GAGAATATTTCTAGAGTTCCTCTTCATTGTGACATGTGTGGATATGGGAT ATGGGTTTTTCAACATGGTCCCAACCAACACTCAAGGTTACCTTCAGATG AAACCAAACAAAGAAGAGCGAAAAGGACATTGTGAATTTGACAAGTATGA TTTGGATGatgaaagaattgaaatccgTAAGaagttccttgttttttttt cacatataaattccccggggggggtactagggttgcgagctgacgggggg gtgccgcccgactttcgaactttggacccttaccgggactaaaaaggaga aaacaaaggaaaattttgggaattttacgacccttagcgggactaatttg accaattttgaccaaatttcgatctttcagggggtaaaaagttgaaattt tcctatttttccgacccttactgggactgaaatttgattttctgattttt ctgacccttagcgggactttggaagtccaaaaaaggtacccttaagggcg gcacataccgtacccttcatttgcctaagtaccccccccgggataaaTTC AAACTGCTTCAAAAGCTTCTTTTTATCagcaaaataaattcaaaacgaat agaccttatcggagtttttgatttttctaaaaaagcgatgcattgtggga ttgtttcgagtgtattacaatagaaatctctaaggagttcctcgagggaa ttctattgtaatacactcgaaacaatcccacaatgcatcgcttctttaga aaaatcaaaaactccgataaggtctattctttGTTTATAAAACATTAACT TTCTCTGTCGTCAATgttctttgattttgattttctattCTAATAAAATA TCTCACGCATTGATTTTCTACTCTAATGAAATATCTCACGcactacacgt ctttttttttttaagaaacacacttttaagaaacatgaggctcagaatgc ctagaaaaactaagaaacatctaagaaacatgctgaggctgagaatgaga aaataacattttttaattcgtttttttataagaaccttccaatcaaggct aattatgtcaaaaagttagaaacatgtaagaaacatttaaggctcaaaag gccgatttcttaagaaacattgaggctgcttggtaaaactagtttcttaa aaaaaaaagacgtgtagcCTTTCCCGATTTCCTGAATAAATCAGCTAAGA AATAAAGATAAGAATAAGTGTTGTTAATTGTCGCACTGGCCTTATCGGCC CCTTTTACGATGTTTCTTATTACACAAatgctcaattttttttcaatttt aagccCGACTCCAATTTAATTTCGATCCCTTAGAGAGTGGTCAGTATCAA ATAGGGTGAGGTAGAGGATATTTTCataaattcgagaaaaaaaattcgca cAcccccccTTGATATCCTATATTTTTGGTACCCCCTAATATAGGCCACT GTTCTTTGACCTTTCAAAACGAATGATTTTTCCAGAGGCGTTGCCACGAg tcttaaaaataataattttgttCTCGTAACTTAAGTGCCGCAGGCGAAGA GTTTGCTCTAAGCAAGCataataagcataaaaaagGCAAAGTTAGCGAGA ATAAGCTCACAAAAAATGCagaaagcatgaaatttcatgtcactgaaagt tttctttgtaattttggcACAAcaggcaaaatttttttggtctAAGAAAA GTCAGACAGCTTAAAGGAGGCCTGCAAAAAGGTCAAAGGTAGCCAGAAAG CAAAAGCTGCAAGCACCTTCACATTCCATTGGGTAAACTTTGACCTTTTC AGtcaactttcttttcttttttttttcttccccgGTGGATACACTGCTTG CTAATACATTTGAAATCTAGATTAATGAAATTGGAACAACCccctaaaga aattaattttgtttaagACCCCCACTAAGGGTGGCAAAGATTTTTGACAC CTCCTGGAATCCTCCTcccccccTAGTAAAttctttctgaccactccctt acgATAGCCCTTATTAAGCCAGCGACGAAAAAATAACACTGGTAAGGCGA TATTCGATCATGCAGAAAGTAAGTTTGGATTCTATTTTCTAGGAAACATT CCAAGTATTACTGCAAGAGTTCCAACTGCATCCTTGGCTGATTCTTTGGG TTCATTATCCCCCGAAACCATGAAAAAATTGGGAATCGACCCAGAAAAGT GGATCAAATTTTCAGTAGCTGTTAAAGACGCAGCCGAAAAAGCACCCATG GCGGCTCATCCAATCTTAAAACCAGTTCTAAATCAAATGGTCAGTGGGTT AGGGTTGAAAAACACCCATCGTGATCCTGAAGCTATAATAGAAAGCGTTA ACAAAGCTTCGTATAAGATCATCATTGCTACCAATAAGAGGTTCAATCAT CTAAAAGAATACGTGGATCAAACAGGTCGGAAACTCTTGAAACACAACAT GGAAAACCATTACCTTGGACAACAAGAAAATTGGGCAAATTGTTTACTAA GAAAATCACTCTGGGATTCGAACAAATGTCAAAAAGATGTAGAACAAGAT GTTAATGGCTTGAAAAACTTCTTCGTGAACAAAAGGATGTACACCTTATA TCCAAGGAAAAAGATGAGTGTCGaagatatcaaatttttggaaacacAAC TTCCCGTAACTAGAACCTGGGCTGTATTCCATCTTCAAATCATTGCTGTT TTACTTCGTACTttggagaaaatgaaaaaagatccCAAGCGAGCTCACAA GAAAAAATACTACCGTAATCAGTATACACTTTACAAAGATAAGTTGCGTA CTAACGGTCAATTCTATATGGGATACATGGAATGGGCGTTGAAAAAGATT CGGAAAGCTCGCATAGTTGAAAACCAATTTGACGAGGAGCCAcaatgtac aaaatttgaggACGAATTTGATGGGAGGACGTATGGACAATGTTTGCAAT ATTCACAAAAGAAATGCACATTCAAGCCAACAAAGTTCAGCCACAAATTC TGCGACTTGGATATCACTATGTCATGTTCGGATTGTGTTTGTAAAGTTTG TACGGGTGTTTTTGGTATTTGTAGAACCGACACATGGATTACAAAGTCTT TGCACACTAATGTATTCTCTCATATCAAAGATAGAATGGATGAAATTTCA CAGAAATATATTGAAGATTTGAAACCACGTTTTAATGCTTATTGGAGCAG AGAGGTTGGAAGACATATCAGTGTCTTGAAAGATATCTTTAACAGTCCAA AATTAAATCTGGATGAAGGTATGATATCTTTTGTATAGTttgatagatag agtcgatattttacgtgcaTAGTTCCACGGCCAGCcaccggctcggctat ctatgagctgaacggaacattgaaaggagcggggattcgaaccatGAATC CCTGGTTAGAAATGCTGACACCTTTGACAACTTGGCCATTTTGTGTCTTC CTTTTCTTCATATCtttttttCTAGTAAACCATCGTATTTTAAATCAGAT TTGTGGTGCTAGTTGCATTCACTTTCAGTTAGACTTCAAAAAACAGTGGC CATATTCTCATCAAATTCAGAGCTTGCAAAATTACACTGGGGTTTATTGT TTTCTGATTTTAGGGAAATCGGGTAGTAGAGATGCTATTGAAGATAATGA AGATGATTTTGGCGATGGTTTATTTGATGATGTTAACGAACAGAGCGCAA GCAGTGAAGAAGAGATTGGGGAGGAGTCTGGGGATAGTGAAGATAATGGA GATAATGTTATAGGtgaaacacgtggaaagtcggATAAtgataaattcaa aaatgtACCAGAAGAGGTTAGAAAACATAATTGTAGTAAGCAACATATTT AAGCCATTTCGATATCATTAATGAAGTAATAATTAtcgcattttttgaaa atgccgaAAGTTTGACCCCCCTaatctttttttgaagttttatattgttt ttttcttaaaatttgagAGACAGATTTCTTTTGAGCACAaggactttttt tcaaaactgcctTTATCGTGTATTTAACAGATTGGTCCAGAAAATAATCA TGGGTGGGGTATTAATGATAAAAGCCTTACAACCAAAATTTGTGCAAAAT CGGACCAggttatgctgaaagtgagcatttaGAATAAAATACGGACCAGG TTATGCTGAAACGACGCACTTGAccaaaattataacaatttcattgaatt gtaAATTGACTATAATCAGATGGTGCTGCCATTAGGGTTACTTTCcgaaa actccgatcaaagatgtcTGATATAGCTTTGTCCAGGATTTAGACGGGTC CAAAAGGATGTAATAATTAACGAGGAataataccttaagtggattaattt tcgcgtggacaaaatttcgcgaatggaagattgaaaattttcgcgtggac taaatttcgcgatttggcctgttttttacctaatttctttcattttccta ggggttttggcaaaaattgcaattctaaaaatttcgcgtggacaaaattt cgcgaaaatggccaaaatacgcgaaaatcgcgaaaattaatccacgcgaa aattaatccacttaaggtacatGGTTTTAGTACCCAATACTTTCACCCTC CAAACCATGTTTCTACTAATACAAATCGTATATAATATCATTCACTTTCT TATTATTACAGGTGAAAGAAAGAATTCGTGAAATGGCGAAGATGGAGAAA GAAAGTGAAGAACAGGATGATGAGATATTACAAGGAGTGACTGGTAAAGA AACATTCACCGAATACCTCAGAAAAGTCGATCAGAATGTCAAAAACCATT ACAAGAATAAAAACcagaaacaaaagaacaaacaaTAACTCATCCCTTAA TTGGTTTTTGTTTTaagtattacttcgaataaacgccccctttttttaaa gaccCGCCTCGAATAAatgcccccttcttttaaaggcccgcctcgaataa acgcccccttcttttaaaggcCCGCCTCGAATAAATGCCCCttcctaaaa gaaaaattttcaataaacgccccttcAAATAAATACCTCCCTTCTAGGAG AGAAATTATATGAACGCGAGAACTTAAATATGTGTTTATgtagttattat tattatttcagTATTTAAACTcattttccctatttttacaTCGCTTACTC GTCCAGGGTGTTTATTCGATATAATGCGGTATGTGATACAGATCGGTCTC AAAATCCATGACTGTTTAGCAAGTTTTTGCTTAAATATTGTATAGCACAA AAGGGCATTATTTACTATATTTAATTTTGGTATGAGTTTAAAGTTTGTGA TACAtaacaaaaaaattagattAGCTAAATTTTGCTTAGTGGCAGCGGTT ATCTGTAGTTTGATTCGTTTTGTTTTTGGTGGCCGCCTGTAATTTACTAA gaatatttataaatataaaaataagatGATAAAAAACAGATCGTAAACCT TTGGAACCTTTTTTCACAACCtttttttCCTGCAGGAAACacaaaaaaca ccaaataaTGATGTTACATCTGGATTCGTAATAGTTATCACATGGTACAG ACAacagagtacaatatgggatatatttttcgtgttCAGAATTTTCGTCC TACTGTATTTGCCgagaacgagaaaaatatatgCAATATTGTACGAGTTG GGagtaaaagtgtgataactggtttatcgtcaacttcaaaaatatcaaca aacttttctctctccattTGTGTCTCTTTTTCTTTGTTTTGTTATCTTCC AATATTTTATCTTTTACTTTTATTTGTAGATGAAATCAACATCAAAACAT TCGACAAAAGAATTgaatggtcattaaaaagataaaaacattctTTTCAT AACTCTTTTGATAAGTTGTTGTGTATTGGAAGCGAAGAGAAAACGTTTCT TAtcataaaattgtacaaaatatgatctctcgcttaccagaccaattttt tgaacgcggtcttgtatttgtacggtacaatacGAAATACccgtttttaa ccaatcagattgctcatatttctCATGTTGACGATAAGAGGGGGTAGTAA GAAGCACTGTTTGGTAACAGACACCTTTTTTACTCATACTCACTTTCtca tcaaagaaaatatttcaggatcatttttcccaaaaagttaagaatattca tgatgaattagaaaaacaccattcttatataaaaaaacgcgtGTCGTTAG GAAACCAAGCATAGCatttttaaaaacgtttttttttcgctttttaaaaa tgtaaaataacaaattttgaaaaatgtaatacaacaaatttgataaacat gatttggtattttttctgaCTCCATGTGAAATCAATGCAATAaaccaaac tcgaacccagtccatTTTTTAtgataagtaaaaaaaaaataaaaatagtg cAAATGGCTCTGGGTACAAAATTGGCAACAACCGGCACGTCATATAAATC ATTAGACCATGAACAAATATTATCCTTAACATATCGTGTTTTGCGCATGA TAAGTTAATGAAATGTTGCTATTGCTATACGAATATTCTGGTGAAATGGT TTCTTTTTGAATACTGTATCACTTTTGGGAGGAAGAACTCTTTCCACTAA CCGAAAAGGTAAGAATAATAATCTCGTCTCATCCTCAACTcgaacaaaaa gacaaaaaaaaacacattccAGGCATAAATACTCATAATGTATCTGTAAA AAAGGATCCTATCTtgaggccccccccccagcggacattcaattcacgca atcacgcaatttttttttcgaaattcacgcattcacgcaaattttcctcg agtttcacgcaataacccgttttttcaggaaatcggaaaattttcgggaa aaatcggggaaacattggaaaatcgggaaaaatgttcggtggagaaaagg gaaaattcacgtattcacgcacaaaatagcccagattcacacattcacgc aatcaaaaagtgaattttaacgttcacgcaagttttttcaattcacgcat tcacgcatttttttttcacgcaaccgaaaatacccattcacgcattcacg caaaccgctgggggggggcctaTCTTGGGAGGAGAAgcatttttatcttt ctttcgtATGATCTAGAAAAATCATCACAcgccatacacgttttttgagA GCAAAAGTATATAAGAGCAAAAGACTTCGACGCTAAGATATTCGTTAACt tagcctggagttccttatttttccagagaattttagcctcaaagttcctt gcATACTAAGCTCTTAAGATTGGATTTGCTAAGTGAAAAACCTTTGTATA ACTATAACAGTAGACTAAATgtacagaaaaaaaagtttattgaatGTTGT TTTGTCAATATCTGTCAATCTATTCTTATCAAAGTcatctttttaggctt ttgtAATTGTGAGCAAGTTAAAGTTTAATTCTCTGTTccttaacttgttt tcttattctcaacCTAAGCAGTTTCAGTttcaaccattttcagcctcgtg ttccttataaaagtgttccttaaaaaaaaaactcttcacTCGATATCTAC GAACGcgaattattttgttaatttctgCTTTGTCAGGATATTAACCATAT ATGGGACACTGAAACCATACCAGATGGATGGAATATAGGTCGTCTAACGA TACTACCTAAAAAAGACGATCTAAGTTTACCTAAAAATTATCGCGGCATT ATGCTCTTGGAAGTCTCGTATAAAATTATCGCTATAATCCTTCAAGAACG CTTACGACCAATCCAAGAATCGCTCGACCACGAGTCACAATGTGGCTTTC GTCCAGATCGAGGTTGCATTGACGCAATTTTTACCGTTAAACTTGCTCTT AAAAAACGTCGCGAACATGGACTTGAGTCATGGGTTTTCTTTTTGGACTC GGTAAAAGCCTTTGATCGGGTTCCCAGAGAACTACTGTGGCTCATTCTTG AACGTTTCGGTGTCCCATCAAAACTCGTCAATTTATTGAAAGCTCTCCAC AAAGCCTTCAAAGTGAAATTCACGGTAGACGAAGTAACCGAAACAATGAA CTGTTCAATTGGTGTCAAGCAAGGTGACATTCTTGGTCCCCTTCTATTCA CGTTTTTCATTGCAGCAGTTATGATAACCTGACGTAAAACAACCGAAGTC CAAGCATGCATTTTCAAAACGAAAGAAGATGATGTCATGACTGGTCGCAG CTACAGAGCATATGGAGAAGATCCACCACTCCAAGACTCTGAGTATGCTG ATGACACTGCTCTCTTATTTAACAGTCGAAAAGAAGCAGAGTATGTCGCA TCTCGCTCGTTTTGGGATGGAAGTACATTCTGGTCCATTGGAGCCACGAG AAGACTCCAAATCAGTTGTTCTCTTCTGTCCAAAGCCACCGAGTAAATAT GAAAATCCAGAAACATATGAGAACCTTGACCTGTCTGACATCATCATTGG CCAGCGTTACATTCCTATCGTTGATAAGTTCGTTTATTTAGGGAGTATGA TTAGCAACGTACGACTGCTCCGACAAAGGTGACGTTCAAATGCGGATCCA GAAAGCAAGCATCGCATTTGGTTCTCTTAAGAAATGTATTTTCTCATGGG TAAAGAGAATTAGTAATGTTGAGCTTTTGAATAAAGTTTGTTTGAATTCG ATTGATAGCTATCAACGTCAAATAGCATGGGCTGGCCACGTAATTCGAAT GCCCTGGTTTCGTTTACCaagaaaaatgatttcttgCTGGGTCCGCTCGA AGCGCCCTAAAGGGGCCCCTCGCTATACGTTTGGTCGATCTttgttcaaa actttcaaaaaatgtaacgTTAATAAGTCATGTTGCTTCTGATAGATTTC AATGGAGAAATCTCATCAATAATTTGAATATATAGCTAGACTTTTATTTC TTCTAGTATTTTCTTATATATGAcaattttctgataatttttttaggATG TATTTGCGCTGTGATTCTCTTGACTATTTTCAGGAGGCCTATTCCCTTTA GGGAAGGCCTATGCTCTTCTTCTATGCTCTTCTTTGTCAGGATATGTCTT ATTTCTGTATTAGAATAGCGAACTTATGTGTATGCTCTTTGAGGACGGCG GAATGACTGGAGCGATTTAGAATATCCCGCAGTTTGTACCCAAAAAATCA AGGACGGTGAAATTACTGAATTACCGTCGTTCTCCTTCAATCAGGATCTA ggcaaatcagaagctaaccgtctccgtcacaAAAATAAAACGCATATTAA AGCCCAAAAACATCATGCgccaaacgttttttttataagagcaaaatACA TAAGAACGAAATGCTTCGAGGCTAAAAacacactttataagaacataagg tttcaatGGCcagaatgttaagaacaagttaagaacacttccaggctttg gggactctaaaacaactgatttcttaggaaaacggcCAAAAAATACCTCC CAcacaatggtgaaaataagaacatctttaaatcattttaaggtttaaat cttaataaaataaaaacatgcaaaaaatctttggatgttctgttcttata aaaaacgtgtatccggACAAAAATGCTGATGAGtgtcttcaaacattttt gagGCTTTTTTAAACTGTACTCGATTGAACTCTTTTAGATCACTTTCTCA TTATAGGATGAGGGTATTGAGAAGATTACTAGAGTTCCTCTTCATTGTGA CATGTGTGGATATGGGATATGGGTGGATGAACCCAAACAAAGAAGAGCGA AAAGGACATTGTGAATTTGACAAGTATGATTTGGATGATGAAAGAATTGA AATCCGTAAGACTTTTCTTGTTTTTCACATATAAATTCAAACTGTTTCGA AGCTTCTTTTTATCAGCAAAATAAATTCAAACGAATTCTTTTGTATCTCA ATGTTTCCTGATATCGATTATGAAATCAACTCATTAAAAATATGATTCAC ACCAGCCTTCCCCGATACTCTTGCAGAATAAATAAATCATGAAAATGTAG AAAAGAATATTAGAATAATTATCATTTTATGACATTTTGGCAAAATCAAT CATGCAATAGGTAAGGTTTGATTCTATTTTCTAGGAAACATTCCAAGTAT TACTGCAAGAGTTCCAACAGCATCCTTGGCTGATTCTTTGGGTTCATTAT CCCCTGAAGCCATGAAAAAGTTGGGAATCGACCCAGAAAAGTGGATAAAA TTTTCAGTAGCCGTTAAAGACGCAGCCGAAAAGGCATCCATGGCGGCTCA TCCAATCTTGAAACCAGTTCTTAATCAAATTGTC

Coding sequence (CDS) from alignment at sc0000059_pilon:133679..144012+

>XLOC_011829 ID=XLOC_011829|Name=XLOC_011829|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=852bp|location=Sequence derived from alignment at sc0000059_pilon:133679..144012+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCTGACTCTTTTAGATCACTTTCTCATTATAGGATGAGGGTATT
GAGAATATTTCTAGAGTTCCTCTTCATTGTGACATGTGTGGATATGGGAT
ATGGGTTTTTCAACATGGTCCCAACCAACACTCAAGGTTACCTTCAGATG
AAACCAAACAAAGAAGAGCGAAAAGGACATTGTGAATTTGACAAGTATGA
TTTGGATGatgaaagaattgaaatccATGAAGTCTGACTCTTTTAGATCA
CTTTCTCATTATAGGATGAGGGTATTGAGAATATTTCTAGAGTTCCTCTT
CATTGTGACATGTGTGGATATGGGATATGGGTTTTTCAACATGGTCCCAA
CCAACACTCAAGGTTACCTTCAGATGAAACCAAACAAAGAAGAGCGAAAA
GGACATTGTGAATTTGACAAGTATGATTTGGATGatgaaagaattgaaat
ccGAAACATTCCAAGTATTACTGCAAGAGTTCCAACAGCATCCTTGGCTG
ATTCTTTGGGTTCATTATCCCCTGAAGCCATGAAAAAGTTGGGAATCGAC
CCAGAAAAGTGGATAAAATTTTCAGTAGCCGTTAAAGACGCAGCCGAAAA
GGCATCCATGGCGGCTCATCCAATCTTGAAACCAGTTCTTAATCAAATTG
TCGAAACATTCCAAGTATTACTGCAAGAGTTCCAACAGCATCCTTGGCTG
ATTCTTTGGGTTCATTATCCCCTGAAGCCATGAAAAAGTTGGGAATCGAC
CCAGAAAAGTGGATAAAATTTTCAGTAGCCGTTAAAGACGCAGCCGAAAA
GGCATCCATGGCGGCTCATCCAATCTTGAAACCAGTTCTTAATCAAATTG
TC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011829XLOC_011829-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059_pilongenomesc0000059_pilon:133679..144012 +
Properties
Property NameValue
Aaloc229-426:10137
Aaloc1-225:1